Personal tools

FFCP PHASE1:Mm9::chr4:108131994..108132056,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=230594|HGNC=|UniProt=B2RX14,A2A9H0,Q3V3D5,Q9EQN6|association_with_transcript=0bp_to_ENSMUST00000043368,ENSMUST00000106673,NM_175472,uc008ubd.1_5end|description=CAGE_peak_2_at_Zcchc11_5end|id=chr4:108131994..108132056,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.22e-08!10;UBERON:0000411!7.22e-08!10;UBERON:0001950!7.22e-08!10;UBERON:0000153!8.21e-08!94;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0000033!2.93e-07!63;UBERON:0007811!4.21e-07!86;UBERON:0002616!5.79e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.27e-08,10;UBERON:0000411,5.27e-08,10;UBERON:0001950,5.27e-08,10;UBERON:0010314,6.39e-07,92|phase1_expression=3.20297694209588,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,4.64843964389675,0.422366166455,0,0.171217968225505,0.0797721589953364,4.79362043807376,3.14713448708391,0.999329285446988,1.82227740650843,4.19737126876888,2.83915948822414,2.05671650408608,3.39511721438424,2.46625541438102,0.893618560807968,1.56719873483361,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0,1.27006134691926,0,15.8481681015439,0.577703239502549,0.664938581433969,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.881277725829041,0.912392380975631,0.183546752161682,2.34717403304412,0,0.439372365468944,0.388859798148567,0.419959264876088,0,5.03347818173209,6.5282592781021,12.7715643674136,0.257259436035947,0.286533439938757,0.515672092277442,2.22548106945558,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0,0,0,0,0.768436610643109,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,0.220868540951614,0.489963196859816,0.575072826109418,0.919218786610021,9.91042928994498,5.74593021383345,3.37934373163736,1.18697658957174,2.65314166446988,1.04182674111352,2.23346399201105,3.93933827022176,3.97275444219706,3.83017161115768,2.13557521198654,1.3047961207771,0.757261933331841,1.88928900266964,0.869593466105033,0.860423876981386,3.39985666853875,0,0,0,0.702222100658759,0.852151612890289,0.519572009205738,0.35333957451034,1.83096445709685,1.28326477414318,0,0,0.216491041011214,0.253359865475099,1.01104889002957,1.1418387971906,7.50919862576798,1.48442139064825,2.77576522825817,2.13125834818499,0.922461989024234,1.3565037649736,4.8211369925639,0.628332956648377,4.20231445148436,1.87979163995885,3.5384422077995,3.07357014900077,2.20841518460394,2.90925151881133,0,17.8596286177044,11.9384622883669,0.510914110417183,2.15667224110656,3.59941638596045,1.90605340609597,6.74057877321702,9.15001205637253,3.26701315493447,8.51739168942155,8.43861009190091,6.64921742590592,6.32740925964255,2.95334155165917,2.23932547098167,2.27450482590307,3.36706969418358,1.95180664444056,1.14951052216736,2.34080768746954,3.0140963567143,4.89862793889561,2.17793324484245,2.81105173679186,3.3631438196072,1.72454394346274,3.21480336285293,2.63926686245923,2.41115305670332,3.89266148915837,0.696504333044333,3.90986059175093,2.7864797354589,4.91549231119264,2.83082697826187,2.55747149456033,2.89976081549703,3.51789089971644,3.78130329068131,4.49814997611899,4.9191057936851,4.78228049950873,5.34828072925938,3.75582761959467,8.17357396570186,4.27855609775049,4.10418660197738,3.08061476274252,1.16959989940266,1.75640092232841,4.42881181909227,10.0939175310781,3.19004298375782,1.32167513193519,0.528901133327089,1.2797295032114,2.32236671860439,2.70621668776396,2.8235693447268,2.00140239460383,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,2.18852119245266,0.974820435595601,0,0.648414149624083,0.398282546508734,1.70701110857774,4.56994050438915,2.25415471346161,1.83286195060783,2.32742984601151,4.48869247298039,1.26473074248515,0.885660887877613,0.470996183524124,1.23397163921801,2.96452627087149,3.50374722003798,1.17935397067922,3.59779379815766,1.82574109249653,2.894125917029,2.29163266603278,4.60313819921297,3.24270453550071,0.823684239564244,8.62609239164127,1.48856379067401,2.18426371180192,1.51547326768267,0.538192240565737,2.8946611281802,2.58654466233247,2.27389694124582,3.58522948172457,1.52770577197669,1.87752198630802,3.51763140627813,1.90434912708811,3.12213836572478,1.26108115284953,1.99318220683897,1.2756381492599,1.63863314715738,1.03610989119537,1.88043776155965,1.50791283939272,2.17562273527484,0,0.827810238914197,6.90367536947505,7.03270119553219,1.14754461763673,1.26235463602186,1.57754109708128,1.17131623288992,2.58508077279359,0.477937595905104,0.891194696329576,2.83076530788832,0.809621403349789,1.16902343164525,1.97643888973262,8.03303291054518,2.83880170416537,0.534196811001766,3.09485222771795,1.97964147567043,0,0.971122544619926,0.604647113929502,2.64047111658257,1.18120757152309,0.922305443831782,3.10113951801865,2.90826983582004,1.42598951353889,0.948110273807448,0,1.03135543248187,7.14923172082955,2.34079422240703,0.776152102696527,2.14337035031592,3.01478397191865,1.78368817602071,3.45552943264454,2.74018454203139,1.87737366450968,6.99045833850607,0.220528398054962,1.97863503529776,2.9063596805263,2.17126529741361,1.43246812803764,1.31312719796049,0.874442509889552,4.26478194624172,2.56306321196779,1.65109494370578,2.22233432843654,2.44878994106098,2.87057878214153,1.37266903923914,1.86976272993241,2.79902904647316,2.62579950228405,0,1.26534397432454,3.45643094115643,1.72808545314882,3.3454127362315,2.18362563746178,1.21377911746339,1.90102948168273,0.785267825952089,0.90730481304255,0.621339313086926,2.81846469342095,1.04661582230785,0.992750942742586,2.13896307178452,0.774958940866387,1.18269287843545,3.87278887530988,1.8228613878153,4.50895181030557,4.59009829569411,2.59227005632079,3.16011120628178,1.01362607645082,2.56777392912068,4.02754551231165,4.29664069601955,4.37098980518783,3.4856680360791,3.83992770653901,3.23092639834072,4.11516755936999,3.2264379243789,3.60594158737084,2.69393156592922,3.74006086981021,1.36038230169127,2.88581739386284,4.39597897386431,4.36500002546604,0.386379188064381,1.12609485270709,1.64836461840539,1.07184189539533,0.501572104035363,9.03602948187307,10.1271552031579,10.3121192419091,9.6237782112465,8.90607275701835,11.3309084608455,10.1253375034771,12.6089936902782,11.3285602246051,9.83744592328458,1.764384908931,1.19707462020309,2.21953687480374,2.91728060481953,2.51535795153579,1.65459157605013,3.77819437262746,3.7086310303001,4.49286893428541,3.28506375292937,4.81610669791456,4.33840585187975,3.09016974650612,3.20125762024346,3.27382173046996,3.33405583898152,2.54945517078682,1.15745532278223,2.88460130562315,3.09117732282234,2.05721551431249,3.19456451086807,2.62279808942053,2.61623549938191,1.69396884747595,2.03075058940024,3.10977553883713,3.15683653725411,2.58027816307137,5.61142271657738,2.96587545310435,3.74317033027141,2.45538625901814,2.47898945897546,2.70069255373598,2.49810577937946,3.74290573512653,4.08255002691767,4.01705497344571,0.882365676478062,1.62307484934295|short_description=p2@Zcchc11}}
|EntrezGene=230594
|HGNC=
|UniProt=B2RX14,A2A9H0,Q3V3D5,Q9EQN6
|association_with_transcript=0bp_to_ENSMUST00000043368,ENSMUST00000106673,NM_175472,uc008ubd.1_5end
|description=CAGE_peak_2_at_Zcchc11_5end
|id=chr4:108131994..108132056,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!7.22e-08!10;UBERON:0000411!7.22e-08!10;UBERON:0001950!7.22e-08!10;UBERON:0000153!8.21e-08!94;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0000033!2.93e-07!63;UBERON:0007811!4.21e-07!86;UBERON:0002616!5.79e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.27e-08,10;UBERON:0000411,5.27e-08,10;UBERON:0001950,5.27e-08,10;UBERON:0010314,6.39e-07,92
|phase1_expression=3.20297694209588,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,4.64843964389675,0.422366166455,0,0.171217968225505,0.0797721589953364,4.79362043807376,3.14713448708391,0.999329285446988,1.82227740650843,4.19737126876888,2.83915948822414,2.05671650408608,3.39511721438424,2.46625541438102,0.893618560807968,1.56719873483361,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0,1.27006134691926,0,15.8481681015439,0.577703239502549,0.664938581433969,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.881277725829041,0.912392380975631,0.183546752161682,2.34717403304412,0,0.439372365468944,0.388859798148567,0.419959264876088,0,5.03347818173209,6.5282592781021,12.7715643674136,0.257259436035947,0.286533439938757,0.515672092277442,2.22548106945558,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0,0,0,0,0.768436610643109,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,0.220868540951614,0.489963196859816,0.575072826109418,0.919218786610021,9.91042928994498,5.74593021383345,3.37934373163736,1.18697658957174,2.65314166446988,1.04182674111352,2.23346399201105,3.93933827022176,3.97275444219706,3.83017161115768,2.13557521198654,1.3047961207771,0.757261933331841,1.88928900266964,0.869593466105033,0.860423876981386,3.39985666853875,0,0,0,0.702222100658759,0.852151612890289,0.519572009205738,0.35333957451034,1.83096445709685,1.28326477414318,0,0,0.216491041011214,0.253359865475099,1.01104889002957,1.1418387971906,7.50919862576798,1.48442139064825,2.77576522825817,2.13125834818499,0.922461989024234,1.3565037649736,4.8211369925639,0.628332956648377,4.20231445148436,1.87979163995885,3.5384422077995,3.07357014900077,2.20841518460394,2.90925151881133,0,17.8596286177044,11.9384622883669,0.510914110417183,2.15667224110656,3.59941638596045,1.90605340609597,6.74057877321702,9.15001205637253,3.26701315493447,8.51739168942155,8.43861009190091,6.64921742590592,6.32740925964255,2.95334155165917,2.23932547098167,2.27450482590307,3.36706969418358,1.95180664444056,1.14951052216736,2.34080768746954,3.0140963567143,4.89862793889561,2.17793324484245,2.81105173679186,3.3631438196072,1.72454394346274,3.21480336285293,2.63926686245923,2.41115305670332,3.89266148915837,0.696504333044333,3.90986059175093,2.7864797354589,4.91549231119264,2.83082697826187,2.55747149456033,2.89976081549703,3.51789089971644,3.78130329068131,4.49814997611899,4.9191057936851,4.78228049950873,5.34828072925938,3.75582761959467,8.17357396570186,4.27855609775049,4.10418660197738,3.08061476274252,1.16959989940266,1.75640092232841,4.42881181909227,10.0939175310781,3.19004298375782,1.32167513193519,0.528901133327089,1.2797295032114,2.32236671860439,2.70621668776396,2.8235693447268,2.00140239460383,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,2.18852119245266,0.974820435595601,0,0.648414149624083,0.398282546508734,1.70701110857774,4.56994050438915,2.25415471346161,1.83286195060783,2.32742984601151,4.48869247298039,1.26473074248515,0.885660887877613,0.470996183524124,1.23397163921801,2.96452627087149,3.50374722003798,1.17935397067922,3.59779379815766,1.82574109249653,2.894125917029,2.29163266603278,4.60313819921297,3.24270453550071,0.823684239564244,8.62609239164127,1.48856379067401,2.18426371180192,1.51547326768267,0.538192240565737,2.8946611281802,2.58654466233247,2.27389694124582,3.58522948172457,1.52770577197669,1.87752198630802,3.51763140627813,1.90434912708811,3.12213836572478,1.26108115284953,1.99318220683897,1.2756381492599,1.63863314715738,1.03610989119537,1.88043776155965,1.50791283939272,2.17562273527484,0,0.827810238914197,6.90367536947505,7.03270119553219,1.14754461763673,1.26235463602186,1.57754109708128,1.17131623288992,2.58508077279359,0.477937595905104,0.891194696329576,2.83076530788832,0.809621403349789,1.16902343164525,1.97643888973262,8.03303291054518,2.83880170416537,0.534196811001766,3.09485222771795,1.97964147567043,0,0.971122544619926,0.604647113929502,2.64047111658257,1.18120757152309,0.922305443831782,3.10113951801865,2.90826983582004,1.42598951353889,0.948110273807448,0,1.03135543248187,7.14923172082955,2.34079422240703,0.776152102696527,2.14337035031592,3.01478397191865,1.78368817602071,3.45552943264454,2.74018454203139,1.87737366450968,6.99045833850607,0.220528398054962,1.97863503529776,2.9063596805263,2.17126529741361,1.43246812803764,1.31312719796049,0.874442509889552,4.26478194624172,2.56306321196779,1.65109494370578,2.22233432843654,2.44878994106098,2.87057878214153,1.37266903923914,1.86976272993241,2.79902904647316,2.62579950228405,0,1.26534397432454,3.45643094115643,1.72808545314882,3.3454127362315,2.18362563746178,1.21377911746339,1.90102948168273,0.785267825952089,0.90730481304255,0.621339313086926,2.81846469342095,1.04661582230785,0.992750942742586,2.13896307178452,0.774958940866387,1.18269287843545,3.87278887530988,1.8228613878153,4.50895181030557,4.59009829569411,2.59227005632079,3.16011120628178,1.01362607645082,2.56777392912068,4.02754551231165,4.29664069601955,4.37098980518783,3.4856680360791,3.83992770653901,3.23092639834072,4.11516755936999,3.2264379243789,3.60594158737084,2.69393156592922,3.74006086981021,1.36038230169127,2.88581739386284,4.39597897386431,4.36500002546604,0.386379188064381,1.12609485270709,1.64836461840539,1.07184189539533,0.501572104035363,9.03602948187307,10.1271552031579,10.3121192419091,9.6237782112465,8.90607275701835,11.3309084608455,10.1253375034771,12.6089936902782,11.3285602246051,9.83744592328458,1.764384908931,1.19707462020309,2.21953687480374,2.91728060481953,2.51535795153579,1.65459157605013,3.77819437262746,3.7086310303001,4.49286893428541,3.28506375292937,4.81610669791456,4.33840585187975,3.09016974650612,3.20125762024346,3.27382173046996,3.33405583898152,2.54945517078682,1.15745532278223,2.88460130562315,3.09117732282234,2.05721551431249,3.19456451086807,2.62279808942053,2.61623549938191,1.69396884747595,2.03075058940024,3.10977553883713,3.15683653725411,2.58027816307137,5.61142271657738,2.96587545310435,3.74317033027141,2.45538625901814,2.47898945897546,2.70069255373598,2.49810577937946,3.74290573512653,4.08255002691767,4.01705497344571,0.882365676478062,1.62307484934295
|short_description=p2@Zcchc11
}}

Revision as of 03:23, 14 September 2013

Short description:p2@Zcchc11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zcchc11_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000043368, ENSMUST00000106673, NM_175472, uc008ubd.1_5end
EntrezGene:Zcchc11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zcchc11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E38.17
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A23.61
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe5.27e-0810
visual cortex5.27e-0810
neocortex5.27e-0810
structure with developmental contribution from neural crest6.39e-0792







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:108131994..108132056,%2B&oldid=3003311"