FFCP PHASE1:Mm9::chr4:111571300..111571330,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230612|HGNC=|MCL_coexpression_id=727|UniProt=Q8VDT1|association_with_transcript=43bp_to_ENSMUST00000102720,uc008udj.2_5end|description=CAGE_peak_1_at_Slc5a9_5end|id=chr4:111571300..111571330,-|ontology_enrichment_celltype=CL:0002563!1.70e-08!9;CL:0002251!1.70e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.19e-12,9;CL:0002251,2.19e-12,9;CL:0000239,2.99e-09,6;CL:0000677,2.99e-09,6;CL:0000584,2.99e-09,6;CL:0000075,8.86e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.73e-19!59;UBERON:0000160!5.49e-19!43;UBERON:0000344!2.09e-13!15;UBERON:0001242!7.80e-12!13;UBERON:0000060!7.80e-12!13;UBERON:0001262!7.80e-12!13;UBERON:0004786!7.80e-12!13;UBERON:0003350!1.70e-08!9;UBERON:0004808!1.70e-08!9;UBERON:0001277!1.70e-08!9;UBERON:0001008!2.62e-07!17;UBERON:0002113!2.95e-07!14;UBERON:0003918!2.95e-07!14;UBERON:0005095!2.95e-07!14;UBERON:0007687!2.95e-07!14;UBERON:0004923!3.76e-07!24;UBERON:0001007!8.01e-07!128;UBERON:0001555!8.01e-07!128;UBERON:0007026!8.01e-07!128;UBERON:0006554!9.78e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.89e-34,31;UBERON:0005409,1.70e-29,47;UBERON:0000344,4.69e-20,15;UBERON:0001242,1.35e-17,13;UBERON:0001262,1.35e-17,13;UBERON:0004786,1.35e-17,13;UBERON:0003350,2.19e-12,9;UBERON:0004808,2.19e-12,9;UBERON:0001277,2.19e-12,9;UBERON:0004923,6.48e-11,24;UBERON:0000485,9.53e-10,11;UBERON:0002113,1.24e-08,14;UBERON:0003918,1.24e-08,14;UBERON:0011143,1.24e-08,14;UBERON:0005095,1.24e-08,14;UBERON:0007687,1.24e-08,14;UBERON:0001007,2.76e-08,116;UBERON:0001555,2.76e-08,116;UBERON:0007026,2.76e-08,116;UBERON:0004119,5.53e-08,118;UBERON:0000925,5.53e-08,118;UBERON:0006595,5.53e-08,118;UBERON:0004921,3.64e-07,114;UBERON:0001008,5.72e-07,19|phase1_expression=0,19.1936474201649,15.4699741392442,16.030603199262,19.0340377379612,6.5472916045637,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,10.3995074815714,9.63518980482114,15.5042630311055,15.0766698655676,12.4973314957816,9.5011709728187,13.1055667475164,7.76056787293567,0,0,0,3.75507105676657,5.81821258754723,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,26.5675337416935,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.118731200954,15.6025834331491,0,0,0.644337306610467,6.6555563125703,10.8965241483986,14.8375988367796,28.4717436926707,13.5053142873689,18.3474702424197,23.4768637008558,22.4208700186988,26.0657628509724,23.9913235360911,24.2952353370328,0,1.02823661348756,4.50830942692322,4.48032921259691,4.65485969202302,5.89140887078676,18.6547784516559,24.6508947125936,28.5737684671302,22.5816809976895,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0,0.614870295887855,4.39328098385976,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0.180938774784468,0,0.328281799490123,27.6906794798358,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0.756037385752609,1.46361807210128,1.9652630737156,0.944050424693745,1.07449492442937,1.30877970992015,1.55537967950151,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0,0.194915761479505,0.384847366561318,0.350630706544707,0.680191150845634,0,0,0,0,7.88266396894964,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,1.11123363900808,0,1.28367683836726,0.252697211763798,0.25347929989024,0.377252682772152,0.749132059759059,1.08842759088278,1.03383844120104,0.476293691283074,1.62238056322798,0.964546102318525,0,0.735994600671987,2.05721551431249,1.4198064492747,0.476872379894642,0.726732083161643,0.941093804153306,0.676916863133412,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,0.619747364743864,0.578719832943424,0,1.87145286756327,1.50409737833809,0.191288332068843,0,0.231867835620421|short_description=p1@Slc5a9}} | ||
|EntrezGene=230612 | |||
|HGNC= | |||
|MCL_coexpression_id=727 | |||
|UniProt=Q8VDT1 | |||
|association_with_transcript=43bp_to_ENSMUST00000102720,uc008udj.2_5end | |||
|description=CAGE_peak_1_at_Slc5a9_5end | |||
|id=chr4:111571300..111571330,- | |||
|ontology_enrichment_celltype=CL:0002563!1.70e-08!9;CL:0002251!1.70e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.19e-12,9;CL:0002251,2.19e-12,9;CL:0000239,2.99e-09,6;CL:0000677,2.99e-09,6;CL:0000584,2.99e-09,6;CL:0000075,8.86e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.73e-19!59;UBERON:0000160!5.49e-19!43;UBERON:0000344!2.09e-13!15;UBERON:0001242!7.80e-12!13;UBERON:0000060!7.80e-12!13;UBERON:0001262!7.80e-12!13;UBERON:0004786!7.80e-12!13;UBERON:0003350!1.70e-08!9;UBERON:0004808!1.70e-08!9;UBERON:0001277!1.70e-08!9;UBERON:0001008!2.62e-07!17;UBERON:0002113!2.95e-07!14;UBERON:0003918!2.95e-07!14;UBERON:0005095!2.95e-07!14;UBERON:0007687!2.95e-07!14;UBERON:0004923!3.76e-07!24;UBERON:0001007!8.01e-07!128;UBERON:0001555!8.01e-07!128;UBERON:0007026!8.01e-07!128;UBERON:0006554!9.78e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.89e-34,31;UBERON:0005409,1.70e-29,47;UBERON:0000344,4.69e-20,15;UBERON:0001242,1.35e-17,13;UBERON:0001262,1.35e-17,13;UBERON:0004786,1.35e-17,13;UBERON:0003350,2.19e-12,9;UBERON:0004808,2.19e-12,9;UBERON:0001277,2.19e-12,9;UBERON:0004923,6.48e-11,24;UBERON:0000485,9.53e-10,11;UBERON:0002113,1.24e-08,14;UBERON:0003918,1.24e-08,14;UBERON:0011143,1.24e-08,14;UBERON:0005095,1.24e-08,14;UBERON:0007687,1.24e-08,14;UBERON:0001007,2.76e-08,116;UBERON:0001555,2.76e-08,116;UBERON:0007026,2.76e-08,116;UBERON:0004119,5.53e-08,118;UBERON:0000925,5.53e-08,118;UBERON:0006595,5.53e-08,118;UBERON:0004921,3.64e-07,114;UBERON:0001008,5.72e-07,19 | |||
|phase1_expression=0,19.1936474201649,15.4699741392442,16.030603199262,19.0340377379612,6.5472916045637,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,10.3995074815714,9.63518980482114,15.5042630311055,15.0766698655676,12.4973314957816,9.5011709728187,13.1055667475164,7.76056787293567,0,0,0,3.75507105676657,5.81821258754723,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,26.5675337416935,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.118731200954,15.6025834331491,0,0,0.644337306610467,6.6555563125703,10.8965241483986,14.8375988367796,28.4717436926707,13.5053142873689,18.3474702424197,23.4768637008558,22.4208700186988,26.0657628509724,23.9913235360911,24.2952353370328,0,1.02823661348756,4.50830942692322,4.48032921259691,4.65485969202302,5.89140887078676,18.6547784516559,24.6508947125936,28.5737684671302,22.5816809976895,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0,0.614870295887855,4.39328098385976,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0.180938774784468,0,0.328281799490123,27.6906794798358,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0.756037385752609,1.46361807210128,1.9652630737156,0.944050424693745,1.07449492442937,1.30877970992015,1.55537967950151,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0,0.194915761479505,0.384847366561318,0.350630706544707,0.680191150845634,0,0,0,0,7.88266396894964,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,1.11123363900808,0,1.28367683836726,0.252697211763798,0.25347929989024,0.377252682772152,0.749132059759059,1.08842759088278,1.03383844120104,0.476293691283074,1.62238056322798,0.964546102318525,0,0.735994600671987,2.05721551431249,1.4198064492747,0.476872379894642,0.726732083161643,0.941093804153306,0.676916863133412,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,0.619747364743864,0.578719832943424,0,1.87145286756327,1.50409737833809,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@Slc5a9 | |||
}} |
Revision as of 03:27, 14 September 2013
Short description: | p1@Slc5a9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc5a9_5end |
Coexpression cluster: | MCL_coexpression_mm9:727 |
Association with transcript: | 43bp_to_ENSMUST00000102720, uc008udj.2_5end |
EntrezGene: | Slc5a9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.19e-12 | 9 |
epithelial cell of alimentary canal | 2.19e-12 | 9 |
brush border epithelial cell | 2.99e-09 | 6 |
gut absorptive cell | 2.99e-09 | 6 |
enterocyte | 2.99e-09 | 6 |
columnar/cuboidal epithelial cell | 8.86e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.89e-34 | 31 |
gastrointestinal system | 1.70e-29 | 47 |
mucosa | 4.69e-20 | 15 |
intestinal mucosa | 1.35e-17 | 13 |
wall of intestine | 1.35e-17 | 13 |
gastrointestinal system mucosa | 1.35e-17 | 13 |
epithelium of mucosa | 2.19e-12 | 9 |
gastrointestinal system epithelium | 2.19e-12 | 9 |
intestinal epithelium | 2.19e-12 | 9 |
organ component layer | 6.48e-11 | 24 |
simple columnar epithelium | 9.53e-10 | 11 |
kidney | 1.24e-08 | 14 |
kidney mesenchyme | 1.24e-08 | 14 |
upper urinary tract | 1.24e-08 | 14 |
kidney rudiment | 1.24e-08 | 14 |
kidney field | 1.24e-08 | 14 |
digestive system | 2.76e-08 | 116 |
digestive tract | 2.76e-08 | 116 |
primitive gut | 2.76e-08 | 116 |
endoderm-derived structure | 5.53e-08 | 118 |
endoderm | 5.53e-08 | 118 |
presumptive endoderm | 5.53e-08 | 118 |
subdivision of digestive tract | 3.64e-07 | 114 |
renal system | 5.72e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.