FFCP PHASE1:Mm9::chr4:111678794..111678804,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=639781|HGNC=|MCL_coexpression_id=2391|UniProt=A7TZE6|association_with_transcript=-69bp_to_ENSMUST00000117379,ENSMUST00000161389,ENSMUST00000162158,ENSMUST00000162885,NM_001102662,uc008udq.1,uc009vcw.1,uc012dip.1_5end|description=CAGE_peak_3_at_Skint1_5end|id=chr4:111678794..111678804,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.87e-18!23;UBERON:0000974!1.87e-18!23;UBERON:0004807!1.87e-18!23;UBERON:0005058!1.87e-18!23;UBERON:0003351!1.87e-18!23;UBERON:0009113!1.87e-18!23;UBERON:0003295!1.87e-18!23;UBERON:0009722!1.87e-18!23;UBERON:0005562!1.87e-18!23;UBERON:0007690!1.87e-18!23;UBERON:0006562!1.51e-17!24;UBERON:0003408!1.51e-17!24;UBERON:0001557!1.51e-17!24;UBERON:0001042!1.51e-17!24;UBERON:0008814!1.51e-17!24;UBERON:0009145!1.51e-17!24;UBERON:0000072!3.10e-15!27;UBERON:0004177!5.85e-14!29;UBERON:0000014!8.98e-14!5;UBERON:0001003!8.98e-14!5;UBERON:0002097!8.98e-14!5;UBERON:0002199!8.98e-14!5;UBERON:0007029!8.98e-14!5;UBERON:0007376!8.98e-14!5;UBERON:0002416!8.98e-14!5;UBERON:0007383!8.98e-14!5;UBERON:0000065!9.05e-12!41;UBERON:0001004!2.11e-11!42;UBERON:0000063!5.15e-11!35;UBERON:0002390!7.14e-08!45;UBERON:0003061!7.14e-08!45;UBERON:0002193!3.43e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.27e-29,5;UBERON:0001003,4.27e-29,5;UBERON:0002097,4.27e-29,5;UBERON:0002199,4.27e-29,5;UBERON:0007029,4.27e-29,5;UBERON:0007376,4.27e-29,5;UBERON:0002416,4.27e-29,5;UBERON:0007383,4.27e-29,5;UBERON:0003102,2.60e-10,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07942639413252,2.74489525383039,2.41251699712623,1.79058516004705,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.608175645870493,0.616265742988964,1.68897069871134,1.25318686967237,1.19208812868759,0.841368146639782,0.738447635872886,0.605798699688886,0.228620419965,0.504130925684203,1.65678397257579,0.962118416403295,0.701261413089414,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,2.10538447600868,0.429742108096597,0,0.882365676478062,0|short_description=p3@Skint1}} | ||
|EntrezGene=639781 | |||
|HGNC= | |||
|MCL_coexpression_id=2391 | |||
|UniProt=A7TZE6 | |||
|association_with_transcript=-69bp_to_ENSMUST00000117379,ENSMUST00000161389,ENSMUST00000162158,ENSMUST00000162885,NM_001102662,uc008udq.1,uc009vcw.1,uc012dip.1_5end | |||
|description=CAGE_peak_3_at_Skint1_5end | |||
|id=chr4:111678794..111678804,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.87e-18!23;UBERON:0000974!1.87e-18!23;UBERON:0004807!1.87e-18!23;UBERON:0005058!1.87e-18!23;UBERON:0003351!1.87e-18!23;UBERON:0009113!1.87e-18!23;UBERON:0003295!1.87e-18!23;UBERON:0009722!1.87e-18!23;UBERON:0005562!1.87e-18!23;UBERON:0007690!1.87e-18!23;UBERON:0006562!1.51e-17!24;UBERON:0003408!1.51e-17!24;UBERON:0001557!1.51e-17!24;UBERON:0001042!1.51e-17!24;UBERON:0008814!1.51e-17!24;UBERON:0009145!1.51e-17!24;UBERON:0000072!3.10e-15!27;UBERON:0004177!5.85e-14!29;UBERON:0000014!8.98e-14!5;UBERON:0001003!8.98e-14!5;UBERON:0002097!8.98e-14!5;UBERON:0002199!8.98e-14!5;UBERON:0007029!8.98e-14!5;UBERON:0007376!8.98e-14!5;UBERON:0002416!8.98e-14!5;UBERON:0007383!8.98e-14!5;UBERON:0000065!9.05e-12!41;UBERON:0001004!2.11e-11!42;UBERON:0000063!5.15e-11!35;UBERON:0002390!7.14e-08!45;UBERON:0003061!7.14e-08!45;UBERON:0002193!3.43e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.27e-29,5;UBERON:0001003,4.27e-29,5;UBERON:0002097,4.27e-29,5;UBERON:0002199,4.27e-29,5;UBERON:0007029,4.27e-29,5;UBERON:0007376,4.27e-29,5;UBERON:0002416,4.27e-29,5;UBERON:0007383,4.27e-29,5;UBERON:0003102,2.60e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,2.05782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07942639413252,2.74489525383039,2.41251699712623,1.79058516004705,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.608175645870493,0.616265742988964,1.68897069871134,1.25318686967237,1.19208812868759,0.841368146639782,0.738447635872886,0.605798699688886,0.228620419965,0.504130925684203,1.65678397257579,0.962118416403295,0.701261413089414,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,2.10538447600868,0.429742108096597,0,0.882365676478062,0 | |||
|short_description=p3@Skint1 | |||
}} |
Revision as of 03:27, 14 September 2013
Short description: | p3@Skint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Skint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2391 |
Association with transcript: | -69bp_to_ENSMUST00000117379, ENSMUST00000161389, ENSMUST00000162158, ENSMUST00000162885, NM_001102662, uc008udq.1, uc009vcw.1, uc012dip.1_5end |
EntrezGene: | Skint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.27e-29 | 5 |
skin epidermis | 4.27e-29 | 5 |
skin of body | 4.27e-29 | 5 |
integument | 4.27e-29 | 5 |
surface | 4.27e-29 | 5 |
outer epithelium | 4.27e-29 | 5 |
integumental system | 4.27e-29 | 5 |
enveloping layer of ectoderm | 4.27e-29 | 5 |
surface structure | 2.60e-10 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.