FFCP PHASE1:Mm9::chr4:117602331..117602344,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11876|HGNC=|MCL_coexpression_id=927|UniProt=Q9Z0L2,B1ASJ6|association_with_transcript=23bp_to_ENSMUST00000070816,NM_009711,uc008ujh.1,uc008uji.1,uc008ujj.1_5end|description=CAGE_peak_1_at_Artn_5end|id=chr4:117602331..117602344,-|ontology_enrichment_celltype=CL:0000107!8.72e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.69e-31,9;CL:0000540,2.14e-07,33;CL:0000047,2.14e-07,33;CL:0000031,2.14e-07,33;CL:0000404,2.14e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!8.72e-09!9;UBERON:0000010!1.92e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.69e-31,9;UBERON:0000010,2.50e-25,11;UBERON:0000011,1.34e-11,3;UBERON:0000013,1.45e-11,3;UBERON:0010313,2.52e-11,3;UBERON:0002342,2.52e-11,3;UBERON:0002005,2.52e-11,3;UBERON:0005428,2.52e-11,3;UBERON:0005062,2.52e-11,3;UBERON:0000080,1.76e-07,4;UBERON:0005904,1.76e-07,4;UBERON:0006947,1.76e-07,4;UBERON:0002120,1.76e-07,4;UBERON:0004054,1.76e-07,4;UBERON:0004875,1.76e-07,4;UBERON:0004876,1.76e-07,4;UBERON:0005721,1.76e-07,4;UBERON:0005754,1.76e-07,4;UBERON:0007297,1.76e-07,4|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.52759045775474,0.870848794270651,1.0108910337347,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.928946687441754,1.03093969057675,0.403367049246685,0.889512175379481,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.581857461502877,0.140271639780637,0.316182685621286,0,0.156998727841375,0,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0,0.315270288212382,0,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.160550589987792,0,0,0,2.52406575533005,3.90438744296638,3.87762115919038,2.38968797952552,12.2539270745317,6.22768367735431,4.04810701674894,2.92255857911312,7.11518000303742,5.14114106274891,0.567760340833074,0.35613120733451,0,3.46437258242324,0,0,0.302323556964751,0.377210159511796,0.885905678642318,1.22974059177571,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0,0.322928853391811,0.361877549568935,0.238744688006273,0.492422699235184,0.582961673259701,0,0.341741761595705,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,1.82987520414164,1.18805874903981,1.04544148007234,0.655087691238533,1.21377911746339,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.5208175393758,0.419437377702843,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,2.12508553435409,0.187682475451182,0.915758121336325,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,0,0.628839487883947,0.919217542250071,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.320125762024346,0.114870937911227,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.25384382367503,0,0,0.135804113845862,1.68342681497322,0.593175090620871,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0,0.220591419119515,0.463735671240843|short_description=p1@Artn}} | ||
|EntrezGene=11876 | |||
|HGNC= | |||
|MCL_coexpression_id=927 | |||
|UniProt=Q9Z0L2,B1ASJ6 | |||
|association_with_transcript=23bp_to_ENSMUST00000070816,NM_009711,uc008ujh.1,uc008uji.1,uc008ujj.1_5end | |||
|description=CAGE_peak_1_at_Artn_5end | |||
|id=chr4:117602331..117602344,- | |||
|ontology_enrichment_celltype=CL:0000107!8.72e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.69e-31,9;CL:0000540,2.14e-07,33;CL:0000047,2.14e-07,33;CL:0000031,2.14e-07,33;CL:0000404,2.14e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!8.72e-09!9;UBERON:0000010!1.92e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.69e-31,9;UBERON:0000010,2.50e-25,11;UBERON:0000011,1.34e-11,3;UBERON:0000013,1.45e-11,3;UBERON:0010313,2.52e-11,3;UBERON:0002342,2.52e-11,3;UBERON:0002005,2.52e-11,3;UBERON:0005428,2.52e-11,3;UBERON:0005062,2.52e-11,3;UBERON:0000080,1.76e-07,4;UBERON:0005904,1.76e-07,4;UBERON:0006947,1.76e-07,4;UBERON:0002120,1.76e-07,4;UBERON:0004054,1.76e-07,4;UBERON:0004875,1.76e-07,4;UBERON:0004876,1.76e-07,4;UBERON:0005721,1.76e-07,4;UBERON:0005754,1.76e-07,4;UBERON:0007297,1.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.52759045775474,0.870848794270651,1.0108910337347,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.928946687441754,1.03093969057675,0.403367049246685,0.889512175379481,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.581857461502877,0.140271639780637,0.316182685621286,0,0.156998727841375,0,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0,0.315270288212382,0,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.160550589987792,0,0,0,2.52406575533005,3.90438744296638,3.87762115919038,2.38968797952552,12.2539270745317,6.22768367735431,4.04810701674894,2.92255857911312,7.11518000303742,5.14114106274891,0.567760340833074,0.35613120733451,0,3.46437258242324,0,0,0.302323556964751,0.377210159511796,0.885905678642318,1.22974059177571,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0,0.322928853391811,0.361877549568935,0.238744688006273,0.492422699235184,0.582961673259701,0,0.341741761595705,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,1.82987520414164,1.18805874903981,1.04544148007234,0.655087691238533,1.21377911746339,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.5208175393758,0.419437377702843,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,2.12508553435409,0.187682475451182,0.915758121336325,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,0,0.628839487883947,0.919217542250071,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.320125762024346,0.114870937911227,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.25384382367503,0,0,0.135804113845862,1.68342681497322,0.593175090620871,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0,0.220591419119515,0.463735671240843 | |||
|short_description=p1@Artn | |||
}} |
Revision as of 03:34, 14 September 2013
Short description: | p1@Artn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Artn_5end |
Coexpression cluster: | MCL_coexpression_mm9:927 |
Association with transcript: | 23bp_to_ENSMUST00000070816, NM_009711, uc008ujh.1, uc008uji.1, uc008ujj.1_5end |
EntrezGene: | Artn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.69e-31 | 9 |
neuron | 2.14e-07 | 33 |
neuronal stem cell | 2.14e-07 | 33 |
neuroblast | 2.14e-07 | 33 |
electrically signaling cell | 2.14e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.69e-31 | 9 |
peripheral nervous system | 2.50e-25 | 11 |
parasympathetic nervous system | 1.34e-11 | 3 |
sympathetic nervous system | 1.45e-11 | 3 |
neural crest-derived structure | 2.52e-11 | 3 |
neural crest | 2.52e-11 | 3 |
enteric nervous system | 2.52e-11 | 3 |
vagal neural crest | 2.52e-11 | 3 |
neural fold | 2.52e-11 | 3 |
mesonephros | 1.76e-07 | 4 |
duct of male reproductive system | 1.76e-07 | 4 |
male genital duct | 1.76e-07 | 4 |
pronephros | 1.76e-07 | 4 |
internal male genitalia | 1.76e-07 | 4 |
nephrogenic cord | 1.76e-07 | 4 |
urogenital ridge | 1.76e-07 | 4 |
pronephric mesoderm | 1.76e-07 | 4 |
rostral part of nephrogenic cord | 1.76e-07 | 4 |
presumptive pronephric mesoderm | 1.76e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.