FFCP PHASE1:Mm9::chr4:131830300..131830348,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=66464|HGNC=|MCL_coexpression_id=411|UniProt=E9QNT5|association_with_transcript=0bp_to_ENSMUST00000105963,ENSMUST00000124365_5end|description=CAGE_peak_1_at_Taf12_5end|id=chr4:131830300..131830348,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.20e-12!70;UBERON:0005057!5.24e-12!51;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!3.25e-10!128;UBERON:0001555!3.25e-10!128;UBERON:0007026!3.25e-10!128;UBERON:0004177!3.83e-10!29;UBERON:0002193!8.59e-10!48;UBERON:0004921!1.04e-09!126;UBERON:0004185!1.04e-09!126;UBERON:0003929!2.78e-09!55;UBERON:0002390!8.22e-09!45;UBERON:0003061!8.22e-09!45;UBERON:0000490!1.42e-08!66;UBERON:0005911!3.31e-08!69;UBERON:0006562!1.71e-07!24;UBERON:0001557!1.71e-07!24;UBERON:0001042!1.71e-07!24;UBERON:0008814!1.71e-07!24;UBERON:0009145!1.71e-07!24;UBERON:0000072!1.88e-07!27;UBERON:0002370!2.49e-07!23;UBERON:0000974!2.49e-07!23;UBERON:0004807!2.49e-07!23;UBERON:0005058!2.49e-07!23;UBERON:0003351!2.49e-07!23;UBERON:0009113!2.49e-07!23;UBERON:0003295!2.49e-07!23;UBERON:0009722!2.49e-07!23;UBERON:0005562!2.49e-07!23;UBERON:0007690!2.49e-07!23;UBERON:0003081!3.72e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.87e-13,118;UBERON:0000925,2.87e-13,118;UBERON:0006595,2.87e-13,118;UBERON:0001007,8.93e-13,116;UBERON:0001555,8.93e-13,116;UBERON:0007026,8.93e-13,116;UBERON:0004921,3.23e-12,114;UBERON:0004177,3.83e-10,29;UBERON:0005057,3.83e-10,29;UBERON:0002193,8.59e-10,48;UBERON:0002405,8.59e-10,48;UBERON:0003929,2.78e-09,55;UBERON:0000077,6.72e-09,35;UBERON:0002390,8.22e-09,45;UBERON:0003061,8.22e-09,45;UBERON:0000490,1.42e-08,66;UBERON:0001041,2.94e-08,80;UBERON:0005911,3.31e-08,69;UBERON:0006562,1.71e-07,24;UBERON:0001557,1.71e-07,24;UBERON:0001042,1.71e-07,24;UBERON:0008814,1.71e-07,24;UBERON:0009145,1.71e-07,24;UBERON:0000072,1.88e-07,27;UBERON:0002370,2.49e-07,23;UBERON:0000974,2.49e-07,23;UBERON:0004807,2.49e-07,23;UBERON:0005058,2.49e-07,23;UBERON:0003351,2.49e-07,23;UBERON:0009113,2.49e-07,23;UBERON:0003295,2.49e-07,23;UBERON:0009722,2.49e-07,23;UBERON:0005562,2.49e-07,23;UBERON:0007690,2.49e-07,23;UBERON:0003081,8.47e-07,87|phase1_expression=17.2960754873177,28.964958834067,24.5699589270349,26.0119221723874,25.0447864973174,15.6127722878058,27.7999042308676,34.9924206526672,20.5551534341433,23.1723881058774,37.4967350413856,39.6467630206822,38.1777627746589,34.181377345828,37.9745128469855,54.0608963930835,48.2697695908421,32.3348719492194,32.4961207645601,29.7072756258621,29.254891811968,21.5461364105921,27.9483774378661,30.5585527535407,28.9055694144634,32.1569899904411,35.7532456812032,29.9505013433386,30.5937705324762,23.1867719379136,30.3770799597767,20.9560122241678,21.52726756546,15.8481681015439,25.4189425381122,29.0910629377362,20.2127662699745,81.1951363629601,68.7575103180944,81.1461803159387,75.8818619560008,71.7197759206368,91.2759463698569,14.9817213390937,12.0638548151222,16.3356609423897,14.0830441982647,17.6600376668162,22.8473630043851,16.5265414213141,21.6978953519312,12.9377307928474,23.3217822420254,22.4862264023517,21.8460969442602,27.2695002198104,23.7822755149168,25.7836046138721,16.3876333296274,25.9205579843296,12.6766280701236,14.2314703469035,17.7858959222228,13.498495759221,20.7661936139065,12.0781619540837,11.9840044207362,18.0582603501131,17.8346133170582,11.4755047581937,17.4569717921647,11.1403883917483,9.27647871996777,16.046294697159,16.1978846020819,11.0306254393203,22.0231761998777,16.98241596533,17.8183578577242,14.2437190748609,15.186948838,12.5019208933622,13.1216009530649,18.0084035210138,15.7382195210114,8.83885756421003,12.5287079103211,12.8615617619457,43.3153825865813,39.0704965752081,13.0439019915755,21.5105969245347,19.7191686775248,26.445456390253,22.0923981932207,23.7454250161588,33.2853275712252,29.8253064511601,29.615604524727,30.7405429823996,17.3237406325317,11.5493829672886,15.2883143823987,35.5533351576666,23.5975234702223,24.5759069510846,23.7596489156948,27.9750505311697,44.0194402200192,17.813056687779,26.3697696684527,19.1813251336649,19.3717017695089,20.9504470368145,15.4041206347773,19.9809880214184,28.6746162571874,24.581890676385,52.1920225650426,29.4415666904285,33.126227769059,48.002650060387,14.9113408974498,15.2246014446005,17.8029700791437,36.0194447844114,18.6911594229236,23.9961092397363,22.1102195107133,21.12048015608,17.8425235099264,13.8219787324151,18.251553620189,15.0872119824895,17.8697718321222,14.6017136760982,12.7299204812895,29.8576729464223,27.5467806692705,16.414464759145,27.0650521362424,22.0706020256134,26.4691330813863,22.3043130396858,18.2337817725559,22.4199010498487,19.4899587084236,18.3679393224701,30.1795190105979,27.6094877045016,20.762232651346,21.4811817779023,26.6925359256574,25.4224081561182,27.7805884150724,15.723707078661,30.8973802417823,23.9333553616685,22.4489164522518,20.5054514810147,20.8728193383176,18.3663302690235,17.992599904476,19.479658942993,20.3632589011339,16.9749779667798,16.6329508867764,15.5297905348335,22.2155797383199,18.7150909050169,22.6181978632937,23.9767979377545,29.2001653337097,20.3993756515765,15.1408762966172,15.9502149187891,43.2848605708775,34.1141230995972,23.4617075588757,19.043407092556,18.4280469690593,18.7565677899709,28.0196335244537,35.0015152047109,34.6406214927493,32.2809951259061,33.6789179792361,24.4716460610616,34.8985715943225,30.5598598942435,36.743468478698,23.4986702440153,34.1402221715547,25.1346727741403,18.0332377076929,19.9578301288408,14.9343415119072,13.2556699592702,19.16067074865,23.3224033807771,25.7477913659855,21.1009150306279,33.2026942337607,54.2246593577306,51.1053387294328,50.3691131742072,50.1064499829602,46.5471918322164,38.193877767213,25.3172600956713,20.5911738004295,31.8491239298175,17.2521847832825,23.0727387554472,23.0907878104775,31.0672019874947,29.4211758175936,25.0870631108951,25.6806934331581,28.8026945891137,26.4003261836082,26.9894686382549,24.1730955737157,19.5982321206924,15.9489239393629,15.6106918286239,23.0147310395039,18.3815692408483,17.3805697836661,27.529036872244,27.8022820804092,20.3955172599931,21.1107797514981,21.7562273527484,24.5882136509518,19.8674457339407,22.3165320083031,19.4571399743057,14.4262751931474,40.1428774254953,14.1978698737316,18.7410597262386,16.1567548299599,15.0550342710108,15.5959071857676,16.1353622549635,14.5731852602962,17.2430956167674,15.0209355619679,14.7807805554031,20.8651925256155,19.4091507997308,12.0536349921646,22.9308470931824,21.2392221343941,22.0930378901033,20.5580018736031,21.6895841719283,17.7181135728464,19.0609791725235,18.6068371081119,18.9037539328303,18.5378636760055,18.0140952023415,20.0295356292498,10.3135543248187,19.4050575279659,27.5493473867905,22.2496936106338,19.9333442579381,17.0246624296583,14.9829806785739,17.2776471632227,11.2652031172402,24.8752010547533,32.6221389130283,20.7296694171664,27.3711179882857,16.4693715229824,24.7886121454721,18.6220856644893,24.2928531622691,29.4395644996149,20.7676338251771,44.4264290074417,24.9728110235499,40.3724069665971,61.4081169835293,64.7930639397659,64.2866666710329,13.2583175395207,18.0537373497519,17.1367967517486,31.5041303944987,19.2964956084493,15.2489600345137,18.1448972580626,22.5815359695626,20.9628061196331,21.1737023824169,14.7949685748351,21.9874991266585,19.0534010738935,13.6694648879124,74.4074679063131,21.231349538245,21.6750622498798,11.4726201122988,21.1822110503479,20.7816034353657,14.6696548307192,17.3171831842454,26.7391328285563,37.9287069696829,52.1334311326736,41.0814456816632,30.2060570782345,31.2241309781075,40.2754551231165,44.0405671342004,41.5244031492844,36.5394166540705,46.5222010599918,46.8484327759405,38.4082305541199,45.5734356818519,41.1272256721755,41.178668222061,33.894301632655,27.6611068010558,23.3085251042768,18.6604821747709,29.7155770964419,21.4440449375731,29.0907836949332,24.5423176518135,23.1517849405391,15.5487352250963,12.4245405375755,18.4130094602871,13.1765968091061,13.0608418581203,11.6464028361009,15.8632718451837,14.1754725048679,15.3109209096235,16.7662691324156,13.9795284172991,32.7968018365998,29.5278406316763,26.4637088918908,24.5537784238977,33.5381060204772,23.5319690816018,22.4469195079631,21.427645952845,23.1061830906107,22.7427490587418,22.5596576902313,23.0124136491013,18.8219430014464,21.1283002936069,20.1598496034203,18.0991602687568,19.9321040625151,18.5192851645157,19.3680373377554,19.5774563778748,20.5721551431249,22.3619515760765,19.0748951957857,19.7671126619967,24.0920013863246,17.3459946177937,23.9635644463332,25.2546922980329,20.3706170768793,20.2011217796786,16.8461725736327,18.6173471689815,23.3261694606723,23.7053367014528,15.2396222675102,18.9856039232839,21.9895711938684,16.9748132698156,13.9640482410256,20.2944105589954,24.3461227401443|short_description=p1@Taf12}} | ||
|EntrezGene=66464 | |||
|HGNC= | |||
|MCL_coexpression_id=411 | |||
|UniProt=E9QNT5 | |||
|association_with_transcript=0bp_to_ENSMUST00000105963,ENSMUST00000124365_5end | |||
|description=CAGE_peak_1_at_Taf12_5end | |||
|id=chr4:131830300..131830348,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.20e-12!70;UBERON:0005057!5.24e-12!51;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!3.25e-10!128;UBERON:0001555!3.25e-10!128;UBERON:0007026!3.25e-10!128;UBERON:0004177!3.83e-10!29;UBERON:0002193!8.59e-10!48;UBERON:0004921!1.04e-09!126;UBERON:0004185!1.04e-09!126;UBERON:0003929!2.78e-09!55;UBERON:0002390!8.22e-09!45;UBERON:0003061!8.22e-09!45;UBERON:0000490!1.42e-08!66;UBERON:0005911!3.31e-08!69;UBERON:0006562!1.71e-07!24;UBERON:0001557!1.71e-07!24;UBERON:0001042!1.71e-07!24;UBERON:0008814!1.71e-07!24;UBERON:0009145!1.71e-07!24;UBERON:0000072!1.88e-07!27;UBERON:0002370!2.49e-07!23;UBERON:0000974!2.49e-07!23;UBERON:0004807!2.49e-07!23;UBERON:0005058!2.49e-07!23;UBERON:0003351!2.49e-07!23;UBERON:0009113!2.49e-07!23;UBERON:0003295!2.49e-07!23;UBERON:0009722!2.49e-07!23;UBERON:0005562!2.49e-07!23;UBERON:0007690!2.49e-07!23;UBERON:0003081!3.72e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.87e-13,118;UBERON:0000925,2.87e-13,118;UBERON:0006595,2.87e-13,118;UBERON:0001007,8.93e-13,116;UBERON:0001555,8.93e-13,116;UBERON:0007026,8.93e-13,116;UBERON:0004921,3.23e-12,114;UBERON:0004177,3.83e-10,29;UBERON:0005057,3.83e-10,29;UBERON:0002193,8.59e-10,48;UBERON:0002405,8.59e-10,48;UBERON:0003929,2.78e-09,55;UBERON:0000077,6.72e-09,35;UBERON:0002390,8.22e-09,45;UBERON:0003061,8.22e-09,45;UBERON:0000490,1.42e-08,66;UBERON:0001041,2.94e-08,80;UBERON:0005911,3.31e-08,69;UBERON:0006562,1.71e-07,24;UBERON:0001557,1.71e-07,24;UBERON:0001042,1.71e-07,24;UBERON:0008814,1.71e-07,24;UBERON:0009145,1.71e-07,24;UBERON:0000072,1.88e-07,27;UBERON:0002370,2.49e-07,23;UBERON:0000974,2.49e-07,23;UBERON:0004807,2.49e-07,23;UBERON:0005058,2.49e-07,23;UBERON:0003351,2.49e-07,23;UBERON:0009113,2.49e-07,23;UBERON:0003295,2.49e-07,23;UBERON:0009722,2.49e-07,23;UBERON:0005562,2.49e-07,23;UBERON:0007690,2.49e-07,23;UBERON:0003081,8.47e-07,87 | |||
|phase1_expression=17.2960754873177,28.964958834067,24.5699589270349,26.0119221723874,25.0447864973174,15.6127722878058,27.7999042308676,34.9924206526672,20.5551534341433,23.1723881058774,37.4967350413856,39.6467630206822,38.1777627746589,34.181377345828,37.9745128469855,54.0608963930835,48.2697695908421,32.3348719492194,32.4961207645601,29.7072756258621,29.254891811968,21.5461364105921,27.9483774378661,30.5585527535407,28.9055694144634,32.1569899904411,35.7532456812032,29.9505013433386,30.5937705324762,23.1867719379136,30.3770799597767,20.9560122241678,21.52726756546,15.8481681015439,25.4189425381122,29.0910629377362,20.2127662699745,81.1951363629601,68.7575103180944,81.1461803159387,75.8818619560008,71.7197759206368,91.2759463698569,14.9817213390937,12.0638548151222,16.3356609423897,14.0830441982647,17.6600376668162,22.8473630043851,16.5265414213141,21.6978953519312,12.9377307928474,23.3217822420254,22.4862264023517,21.8460969442602,27.2695002198104,23.7822755149168,25.7836046138721,16.3876333296274,25.9205579843296,12.6766280701236,14.2314703469035,17.7858959222228,13.498495759221,20.7661936139065,12.0781619540837,11.9840044207362,18.0582603501131,17.8346133170582,11.4755047581937,17.4569717921647,11.1403883917483,9.27647871996777,16.046294697159,16.1978846020819,11.0306254393203,22.0231761998777,16.98241596533,17.8183578577242,14.2437190748609,15.186948838,12.5019208933622,13.1216009530649,18.0084035210138,15.7382195210114,8.83885756421003,12.5287079103211,12.8615617619457,43.3153825865813,39.0704965752081,13.0439019915755,21.5105969245347,19.7191686775248,26.445456390253,22.0923981932207,23.7454250161588,33.2853275712252,29.8253064511601,29.615604524727,30.7405429823996,17.3237406325317,11.5493829672886,15.2883143823987,35.5533351576666,23.5975234702223,24.5759069510846,23.7596489156948,27.9750505311697,44.0194402200192,17.813056687779,26.3697696684527,19.1813251336649,19.3717017695089,20.9504470368145,15.4041206347773,19.9809880214184,28.6746162571874,24.581890676385,52.1920225650426,29.4415666904285,33.126227769059,48.002650060387,14.9113408974498,15.2246014446005,17.8029700791437,36.0194447844114,18.6911594229236,23.9961092397363,22.1102195107133,21.12048015608,17.8425235099264,13.8219787324151,18.251553620189,15.0872119824895,17.8697718321222,14.6017136760982,12.7299204812895,29.8576729464223,27.5467806692705,16.414464759145,27.0650521362424,22.0706020256134,26.4691330813863,22.3043130396858,18.2337817725559,22.4199010498487,19.4899587084236,18.3679393224701,30.1795190105979,27.6094877045016,20.762232651346,21.4811817779023,26.6925359256574,25.4224081561182,27.7805884150724,15.723707078661,30.8973802417823,23.9333553616685,22.4489164522518,20.5054514810147,20.8728193383176,18.3663302690235,17.992599904476,19.479658942993,20.3632589011339,16.9749779667798,16.6329508867764,15.5297905348335,22.2155797383199,18.7150909050169,22.6181978632937,23.9767979377545,29.2001653337097,20.3993756515765,15.1408762966172,15.9502149187891,43.2848605708775,34.1141230995972,23.4617075588757,19.043407092556,18.4280469690593,18.7565677899709,28.0196335244537,35.0015152047109,34.6406214927493,32.2809951259061,33.6789179792361,24.4716460610616,34.8985715943225,30.5598598942435,36.743468478698,23.4986702440153,34.1402221715547,25.1346727741403,18.0332377076929,19.9578301288408,14.9343415119072,13.2556699592702,19.16067074865,23.3224033807771,25.7477913659855,21.1009150306279,33.2026942337607,54.2246593577306,51.1053387294328,50.3691131742072,50.1064499829602,46.5471918322164,38.193877767213,25.3172600956713,20.5911738004295,31.8491239298175,17.2521847832825,23.0727387554472,23.0907878104775,31.0672019874947,29.4211758175936,25.0870631108951,25.6806934331581,28.8026945891137,26.4003261836082,26.9894686382549,24.1730955737157,19.5982321206924,15.9489239393629,15.6106918286239,23.0147310395039,18.3815692408483,17.3805697836661,27.529036872244,27.8022820804092,20.3955172599931,21.1107797514981,21.7562273527484,24.5882136509518,19.8674457339407,22.3165320083031,19.4571399743057,14.4262751931474,40.1428774254953,14.1978698737316,18.7410597262386,16.1567548299599,15.0550342710108,15.5959071857676,16.1353622549635,14.5731852602962,17.2430956167674,15.0209355619679,14.7807805554031,20.8651925256155,19.4091507997308,12.0536349921646,22.9308470931824,21.2392221343941,22.0930378901033,20.5580018736031,21.6895841719283,17.7181135728464,19.0609791725235,18.6068371081119,18.9037539328303,18.5378636760055,18.0140952023415,20.0295356292498,10.3135543248187,19.4050575279659,27.5493473867905,22.2496936106338,19.9333442579381,17.0246624296583,14.9829806785739,17.2776471632227,11.2652031172402,24.8752010547533,32.6221389130283,20.7296694171664,27.3711179882857,16.4693715229824,24.7886121454721,18.6220856644893,24.2928531622691,29.4395644996149,20.7676338251771,44.4264290074417,24.9728110235499,40.3724069665971,61.4081169835293,64.7930639397659,64.2866666710329,13.2583175395207,18.0537373497519,17.1367967517486,31.5041303944987,19.2964956084493,15.2489600345137,18.1448972580626,22.5815359695626,20.9628061196331,21.1737023824169,14.7949685748351,21.9874991266585,19.0534010738935,13.6694648879124,74.4074679063131,21.231349538245,21.6750622498798,11.4726201122988,21.1822110503479,20.7816034353657,14.6696548307192,17.3171831842454,26.7391328285563,37.9287069696829,52.1334311326736,41.0814456816632,30.2060570782345,31.2241309781075,40.2754551231165,44.0405671342004,41.5244031492844,36.5394166540705,46.5222010599918,46.8484327759405,38.4082305541199,45.5734356818519,41.1272256721755,41.178668222061,33.894301632655,27.6611068010558,23.3085251042768,18.6604821747709,29.7155770964419,21.4440449375731,29.0907836949332,24.5423176518135,23.1517849405391,15.5487352250963,12.4245405375755,18.4130094602871,13.1765968091061,13.0608418581203,11.6464028361009,15.8632718451837,14.1754725048679,15.3109209096235,16.7662691324156,13.9795284172991,32.7968018365998,29.5278406316763,26.4637088918908,24.5537784238977,33.5381060204772,23.5319690816018,22.4469195079631,21.427645952845,23.1061830906107,22.7427490587418,22.5596576902313,23.0124136491013,18.8219430014464,21.1283002936069,20.1598496034203,18.0991602687568,19.9321040625151,18.5192851645157,19.3680373377554,19.5774563778748,20.5721551431249,22.3619515760765,19.0748951957857,19.7671126619967,24.0920013863246,17.3459946177937,23.9635644463332,25.2546922980329,20.3706170768793,20.2011217796786,16.8461725736327,18.6173471689815,23.3261694606723,23.7053367014528,15.2396222675102,18.9856039232839,21.9895711938684,16.9748132698156,13.9640482410256,20.2944105589954,24.3461227401443 | |||
|short_description=p1@Taf12 | |||
}} | |||
Revision as of 03:58, 14 September 2013
| Short description: | p1@Taf12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Taf12_5end |
| Coexpression cluster: | MCL_coexpression_mm9:411 |
| Association with transcript: | 0bp_to_ENSMUST00000105963, ENSMUST00000124365_5end |
| EntrezGene: | Taf12 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
