FFCP PHASE1:Hg19::chr8:141728760..141728771,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5747|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9611|TSSclassifier=S|UniProt=B4DWJ1|association_with_transcript=61bp_to_ENST00000430260_5end|coexpression_cluster_id=C1109|description=CAGE_peak_36_at_PTK2_5end|id=chr8:141728760..141728771,-|ontology_enrichment_celltype=CL:0000622!5.15e-16!5;CL:0002159!1.93e-15!13;CL:0000154!2.77e-13!6;CL:0000150!3.33e-12!9;CL:0002368!4.06e-11!13;CL:0002166!4.07e-11!3;CL:0002076!4.08e-11!43;CL:0002621!2.37e-10!3;CL:0000362!2.80e-10!8;CL:0002623!5.84e-10!3;CL:0002077!1.15e-09!33;CL:0000244!2.99e-08!4;CL:0000731!2.99e-08!4;CL:0000317!9.28e-08!2;CL:1000448!9.28e-08!2;CL:0002308!9.28e-08!2;CL:0002140!9.28e-08!2;CL:0000223!3.08e-07!59|ontology_enrichment_celltype_v019=CL:0002166;2.69e-66;3!CL:0002159;6.73e-56;14!CL:0000244;2.63e-23;4!CL:0000731;2.63e-23;4!CL:0000362;2.27e-22;9!CL:0002077;4.70e-21;34!CL:0000312;2.30e-18;5!CL:0000240;1.76e-15;6!CL:0000311;1.76e-15;6!CL:0000079;1.76e-15;6!CL:0000237;1.76e-15;6!CL:0000317;3.24e-12;2!CL:1000448;3.24e-12;2!CL:0002308;3.24e-12;2!CL:0002140;3.24e-12;2|ontology_enrichment_celltype_v019_2=CL:0002166,3.01e-66,3;CL:0002159,7.06e-56,14;CL:0000244,2.63e-23,4;CL:0000731,2.63e-23,4;CL:0002077,3.75e-23,34;CL:0000362,2.27e-22,9;CL:0000312,2.30e-18,5;CL:0000240,1.76e-15,6;CL:0000311,1.76e-15,6;CL:0000079,1.76e-15,6;CL:0000237,1.76e-15,6;CL:0000036,1.76e-15,6;CL:0000357,1.76e-15,6;CL:0000114,1.76e-15,6;CL:0000317,3.24e-12,2;CL:1000448,3.24e-12,2;CL:0002308,3.24e-12,2;CL:0002140,3.24e-12,2;CL:0000221,1.14e-10,72;CL:0000066,8.89e-07,253|ontology_enrichment_development_v019=CL:0000357;1.76e-15;6!CL:0000114;1.76e-15;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!2.37e-10!3;UBERON:0001708!2.04e-08!4;UBERON:0001704!2.04e-08!4;UBERON:0000166!3.61e-08!21;UBERON:0002419!9.28e-08!2;UBERON:0007771!9.28e-08!2;UBERON:0003297!9.28e-08!2;UBERON:0001821!9.28e-08!2;UBERON:0003487!9.28e-08!2;UBERON:0001820!9.28e-08!2;UBERON:0005089!9.28e-08!2;UBERON:0005088!9.28e-08!2;UBERON:0001876!2.92e-07!2;UBERON:0001004!2.95e-07!72|ontology_enrichment_uberon_v019=UBERON:0001708;5.61e-50;4!UBERON:0008895;5.61e-50;4!UBERON:0011159;3.56e-40;5!UBERON:0000365;7.24e-19;5!UBERON:0011137;1.01e-18;11!UBERON:0010323;1.01e-18;11!UBERON:0005910;6.71e-16;6!UBERON:0001003;9.98e-14;15!UBERON:0007376;9.98e-14;15!UBERON:0000075;4.22e-13;16!UBERON:0002419;3.24e-12;2!UBERON:0007771;3.24e-12;2!UBERON:0003297;3.24e-12;2!UBERON:0001821;3.24e-12;2!UBERON:0003487;3.24e-12;2!UBERON:0001820;3.24e-12;2!UBERON:0000486;1.97e-08;12!UBERON:0004765;2.62e-08;26!UBERON:0010371;3.52e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.11e-50,4;UBERON:0008895,6.11e-50,4;UBERON:0011159,3.81e-40,5;UBERON:0010188,1.31e-33,6;UBERON:0002539,1.31e-33,6;UBERON:0008816,1.31e-33,6;UBERON:0000365,7.24e-19,5;UBERON:0010323,1.04e-18,11;UBERON:0005910,6.71e-16,6;UBERON:0011137,7.34e-15,14;UBERON:0001003,9.99e-14,15;UBERON:0007376,9.99e-14,15;UBERON:0007383,9.99e-14,15;UBERON:0000075,4.31e-13,16;UBERON:0002419,3.24e-12,2;UBERON:0007771,3.24e-12,2;UBERON:0003297,3.24e-12,2;UBERON:0001821,3.24e-12,2;UBERON:0003487,3.24e-12,2;UBERON:0001820,3.24e-12,2;UBERON:0005089,3.24e-12,2;UBERON:0005088,3.24e-12,2;UBERON:0008814,1.03e-11,18;UBERON:0003102,5.81e-08,99|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.558350568994769,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,2.1266264586358,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,2.4246415373971,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0,0.43050537267123,0,5.32116184244011,7.81059560703662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.14066941641051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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9611 | |||
|TSSclassifier=S | |||
|UniProt=B4DWJ1 | |||
|association_with_transcript=61bp_to_ENST00000430260_5end | |||
|coexpression_cluster_id=C1109 | |||
|description=CAGE_peak_36_at_PTK2_5end | |||
|id=chr8:141728760..141728771,- | |||
|ontology_enrichment_celltype=CL:0000622!5.15e-16!5;CL:0002159!1.93e-15!13;CL:0000154!2.77e-13!6;CL:0000150!3.33e-12!9;CL:0002368!4.06e-11!13;CL:0002166!4.07e-11!3;CL:0002076!4.08e-11!43;CL:0002621!2.37e-10!3;CL:0000362!2.80e-10!8;CL:0002623!5.84e-10!3;CL:0002077!1.15e-09!33;CL:0000244!2.99e-08!4;CL:0000731!2.99e-08!4;CL:0000317!9.28e-08!2;CL:1000448!9.28e-08!2;CL:0002308!9.28e-08!2;CL:0002140!9.28e-08!2;CL:0000223!3.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.69e-66;3!CL:0002159;6.73e-56;14!CL:0000244;2.63e-23;4!CL:0000731;2.63e-23;4!CL:0000362;2.27e-22;9!CL:0002077;4.70e-21;34!CL:0000312;2.30e-18;5!CL:0000240;1.76e-15;6!CL:0000311;1.76e-15;6!CL:0000079;1.76e-15;6!CL:0000237;1.76e-15;6!CL:0000317;3.24e-12;2!CL:1000448;3.24e-12;2!CL:0002308;3.24e-12;2!CL:0002140;3.24e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.01e-66,3;CL:0002159,7.06e-56,14;CL:0000244,2.63e-23,4;CL:0000731,2.63e-23,4;CL:0002077,3.75e-23,34;CL:0000362,2.27e-22,9;CL:0000312,2.30e-18,5;CL:0000240,1.76e-15,6;CL:0000311,1.76e-15,6;CL:0000079,1.76e-15,6;CL:0000237,1.76e-15,6;CL:0000036,1.76e-15,6;CL:0000357,1.76e-15,6;CL:0000114,1.76e-15,6;CL:0000317,3.24e-12,2;CL:1000448,3.24e-12,2;CL:0002308,3.24e-12,2;CL:0002140,3.24e-12,2;CL:0000221,1.14e-10,72;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;1.76e-15;6!CL:0000114;1.76e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.37e-10!3;UBERON:0001708!2.04e-08!4;UBERON:0001704!2.04e-08!4;UBERON:0000166!3.61e-08!21;UBERON:0002419!9.28e-08!2;UBERON:0007771!9.28e-08!2;UBERON:0003297!9.28e-08!2;UBERON:0001821!9.28e-08!2;UBERON:0003487!9.28e-08!2;UBERON:0001820!9.28e-08!2;UBERON:0005089!9.28e-08!2;UBERON:0005088!9.28e-08!2;UBERON:0001876!2.92e-07!2;UBERON:0001004!2.95e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;5.61e-50;4!UBERON:0008895;5.61e-50;4!UBERON:0011159;3.56e-40;5!UBERON:0000365;7.24e-19;5!UBERON:0011137;1.01e-18;11!UBERON:0010323;1.01e-18;11!UBERON:0005910;6.71e-16;6!UBERON:0001003;9.98e-14;15!UBERON:0007376;9.98e-14;15!UBERON:0000075;4.22e-13;16!UBERON:0002419;3.24e-12;2!UBERON:0007771;3.24e-12;2!UBERON:0003297;3.24e-12;2!UBERON:0001821;3.24e-12;2!UBERON:0003487;3.24e-12;2!UBERON:0001820;3.24e-12;2!UBERON:0000486;1.97e-08;12!UBERON:0004765;2.62e-08;26!UBERON:0010371;3.52e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.11e-50,4;UBERON:0008895,6.11e-50,4;UBERON:0011159,3.81e-40,5;UBERON:0010188,1.31e-33,6;UBERON:0002539,1.31e-33,6;UBERON:0008816,1.31e-33,6;UBERON:0000365,7.24e-19,5;UBERON:0010323,1.04e-18,11;UBERON:0005910,6.71e-16,6;UBERON:0011137,7.34e-15,14;UBERON:0001003,9.99e-14,15;UBERON:0007376,9.99e-14,15;UBERON:0007383,9.99e-14,15;UBERON:0000075,4.31e-13,16;UBERON:0002419,3.24e-12,2;UBERON:0007771,3.24e-12,2;UBERON:0003297,3.24e-12,2;UBERON:0001821,3.24e-12,2;UBERON:0003487,3.24e-12,2;UBERON:0001820,3.24e-12,2;UBERON:0005089,3.24e-12,2;UBERON:0005088,3.24e-12,2;UBERON:0008814,1.03e-11,18;UBERON:0003102,5.81e-08,99 | |||
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|short_description=p36@PTK2 | |||
}} |
Revision as of 04:00, 14 September 2013
Short description: | p36@PTK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_PTK2_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | 61bp_to_ENST00000430260_5end |
EntrezGene: | PTK2 |
HGNC: | 9611 |
UniProt: | B4DWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.01e-66 | 3 |
general ecto-epithelial cell | 7.06e-56 | 14 |
transitional epithelial cell | 2.63e-23 | 4 |
urothelial cell | 2.63e-23 | 4 |
ecto-epithelial cell | 3.75e-23 | 34 |
epidermal cell | 2.27e-22 | 9 |
keratinocyte | 2.30e-18 | 5 |
stratified squamous epithelial cell | 1.76e-15 | 6 |
keratin accumulating cell | 1.76e-15 | 6 |
stratified epithelial cell | 1.76e-15 | 6 |
keratinizing barrier epithelial cell | 1.76e-15 | 6 |
epithelial fate stem cell | 1.76e-15 | 6 |
stratified epithelial stem cell | 1.76e-15 | 6 |
surface ectodermal cell | 1.76e-15 | 6 |
sebum secreting cell | 3.24e-12 | 2 |
epithelial cell of sweat gland | 3.24e-12 | 2 |
epithelial cell of skin gland | 3.24e-12 | 2 |
acinar cell of sebaceous gland | 3.24e-12 | 2 |
ectodermal cell | 1.14e-10 | 72 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.11e-50 | 4 |
splanchnocranium | 6.11e-50 | 4 |
primary subdivision of cranial skeletal system | 3.81e-40 | 5 |
protuberance | 1.31e-33 | 6 |
pharyngeal arch | 1.31e-33 | 6 |
embryonic head | 1.31e-33 | 6 |
urothelium | 7.24e-19 | 5 |
cranial skeletal system | 1.04e-18 | 11 |
transitional epithelium | 6.71e-16 | 6 |
axial skeletal system | 7.34e-15 | 14 |
skin epidermis | 9.99e-14 | 15 |
outer epithelium | 9.99e-14 | 15 |
enveloping layer of ectoderm | 9.99e-14 | 15 |
subdivision of skeletal system | 4.31e-13 | 16 |
skin gland | 3.24e-12 | 2 |
epidermis gland | 3.24e-12 | 2 |
gland of integumental system | 3.24e-12 | 2 |
sebaceous gland | 3.24e-12 | 2 |
skin sebaceous gland | 3.24e-12 | 2 |
sweat gland | 3.24e-12 | 2 |
sweat gland placode | 3.24e-12 | 2 |
sebaceous gland placode | 3.24e-12 | 2 |
pharyngeal arch system | 1.03e-11 | 18 |
surface structure | 5.81e-08 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.