FFCP PHASE1:Hg19::chr8:27695552..27695578,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55872|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18282|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc011lap.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_PBK_5end|id=chr8:27695552..27695578,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000945;5.04e-08;24|ontology_enrichment_celltype_v019_2=CL:0000228,6.31e-21,1;CL:0002372,6.31e-21,1;CL:0000945,5.23e-08,24;CL:0000826,5.23e-08,24|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10|ontology_enrichment_disease=DOID:162!1.73e-08!235;DOID:14566!2.08e-08!239;DOID:0050687!1.40e-07!143;DOID:305!9.81e-07!106|ontology_enrichment_disease_v019=DOID:3193;3.52e-11;2!DOID:962;3.52e-11;2!DOID:0060058;7.66e-09;10!DOID:1192;7.02e-08;3|ontology_enrichment_disease_v019_2=DOID:3193,3.35e-11,2;DOID:962,3.35e-11,2;DOID:0060058,7.36e-09,10;DOID:1192,6.78e-08,3|ontology_enrichment_uberon=UBERON:0001737!3.24e-08!9|ontology_enrichment_uberon_v019=UBERON:0003714;3.52e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.35e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0003135,2.62e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,1.23947520928483,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0,0,0.474541238222193,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,1.8020583470635,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.426851060090485,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,4.08246458736556,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0,0.37950746544837,0,0,0,0,0.216388639742091,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0,0.300646838828985,0.933193722575224,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.584714536689484,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0,0.229073192331831,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0.169346664131569,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.323474434190045,0,0,0.33946505990805,0,0.123935764259002,1.67593475391973,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0.392600934460972,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0,0.45178432815584,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,6.13807455567739,14.4700630284336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0|short_description=p3@PBK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18282 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011lap.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PBK_5end | |||
|id=chr8:27695552..27695578,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000945;5.04e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.31e-21,1;CL:0002372,6.31e-21,1;CL:0000945,5.23e-08,24;CL:0000826,5.23e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease=DOID:162!1.73e-08!235;DOID:14566!2.08e-08!239;DOID:0050687!1.40e-07!143;DOID:305!9.81e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3193;3.52e-11;2!DOID:962;3.52e-11;2!DOID:0060058;7.66e-09;10!DOID:1192;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.35e-11,2;DOID:962,3.35e-11,2;DOID:0060058,7.36e-09,10;DOID:1192,6.78e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.24e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.52e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.35e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0003135,2.62e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,1.23947520928483,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0,0,0.474541238222193,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,1.8020583470635,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.426851060090485,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,4.08246458736556,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0,0.37950746544837,0,0,0,0,0.216388639742091,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0,0.300646838828985,0.933193722575224,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.584714536689484,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0,0.229073192331831,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0.169346664131569,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.323474434190045,0,0,0.33946505990805,0,0.123935764259002,1.67593475391973,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0.392600934460972,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0,0.45178432815584,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,6.13807455567739,14.4700630284336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@PBK | |||
}} |
Revision as of 04:57, 14 September 2013
Short description: | p3@PBK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PBK_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc011lap.1_5end |
EntrezGene: | PBK |
HGNC: | 18282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.31e-21 | 1 |
myotube | 6.31e-21 | 1 |
lymphocyte of B lineage | 5.23e-08 | 24 |
pro-B cell | 5.23e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.35e-11 | 2 |
testis | 4.43e-11 | 8 |
male reproductive organ | 2.62e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.35e-11 | 2 |
neurofibroma | 3.35e-11 | 2 |
lymphoma | 7.36e-09 | 10 |
peripheral nervous system neoplasm | 6.78e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.