Personal tools

FFCP PHASE1:Mm9::chr4:57313196..57313230,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=545622|HGNC=|UniProt=Q14BS5|association_with_transcript=0bp_to_ENSMUST00000043585,uc012deo.1_5end|description=CAGE_peak_3_at_Ptpn3_5end|id=chr4:57313196..57313230,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.79e-10!43;UBERON:0005177!3.25e-09!85;UBERON:0007023!1.26e-08!51;UBERON:0006554!1.63e-08!16;UBERON:0001008!6.74e-08!17;UBERON:0002113!2.23e-07!14;UBERON:0003918!2.23e-07!14;UBERON:0005095!2.23e-07!14;UBERON:0007687!2.23e-07!14;UBERON:0005409!2.59e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.36e-09,79;UBERON:0006554,1.02e-08,18;UBERON:0007023,1.21e-08,51;UBERON:0001008,3.86e-08,19;UBERON:0002113,1.46e-07,14;UBERON:0003918,1.46e-07,14;UBERON:0011143,1.46e-07,14;UBERON:0005095,1.46e-07,14;UBERON:0007687,1.46e-07,14|phase1_expression=2.7225304007815,1.74487703819681,2.72999543633722,2.72217790176147,4.50806156951712,3.52546471014969,1.63528848416868,0,0.563154888606667,0,0.171217968225505,0.159544317990673,0.856003649656029,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,2.29616883407888,2.78014663362479,1.82839852397255,2.87986361028132,2.75291137280604,1.72269589234506,2.15380998079537,1.07735616342945,1.52018735565099,1.00812051903972,2.88249663851896,1.27006134691926,0.61506478758457,0,2.3108129580102,3.49092755252834,3.67504841272264,0.418531630736908,0,0,0.588231488031014,0,0,1.1330713617802,1.52065396829272,0.550640256485045,0.782391344348039,0,0.219686182734472,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.21389876515759,3.1739458756322,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0,1.42825492201902,0.662605622854841,0.244981598429908,0.0958454710182364,0,4.40463523997555,6.38436690425939,5.06901559745603,0.527545150920775,0.731901148819277,1.56274011167028,2.51264699101243,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,1.86399445825301,0.37863096666592,0.226714680320357,3.18850937571846,1.72084775396277,3.39985666853875,11.3337670243942,7.79731700937203,4.92829575807069,4.63466586434781,0.511290967734173,0.259786004602869,0.35333957451034,2.95771181531029,0,0,0,1.5154372870785,1.26679932737549,2.52762222507392,3.31133251185274,1.8125651855302,4.30482203287992,0.867426633830679,1.52232739156071,2.07553947530453,1.95939432718409,2.58695155698551,3.26733137457156,1.48316980640624,1.15679485535929,2.65383165584962,1.13236794963186,1.10420759230197,1.45462575940567,3.72783522436244,3.51336956413857,3.97948742945565,4.85368404896324,0.838705871541442,0,1.01656181658452,1.9472783122627,0.457500602818626,0,3.30266208365325,3.06858548796397,5.194701113989,5.19172041816825,3.25885964321012,2.86136032403214,10.108910337347,12.8369532090749,1.04096354370163,0,0.360124259610698,1.20563854268572,0.612328492361951,1.2811372028485,0.562210347358373,5.17406741478031,0.862271971731369,1.13463648100692,0.879755620819744,0.657587197282725,1.39023624612799,1.74126083261083,2.05782136407943,1.59227413454795,0.702213187313235,0,0.284163499395593,0.207125772535502,0.469052119962192,0.540186184383045,0.710234206755631,0.983821158737019,0.925602677324269,0.930135779001631,1.07309360559848,0.700592054203017,2.30383789878873,2.79084688934462,4.45878452502207,3.36259971078264,4.17145219052996,2.81833479396781,7.36014819974445,0.205809224758569,8.59088835757875,3.17340679996253,1.06644125267617,0.928946687441754,5.92790322081629,5.04208811558356,3.11329261382818,3.42406127002606,3.32170343081158,2.9645811850322,4.77536896720512,3.58121649674071,5.65395852645448,3.59527763461689,5.40345124686736,5.17767310461355,2.84501851429623,3.08470984046268,6.76246414038483,6.72049381889537,4.84881217919064,6.52263124979963,7.3986748435381,10.4803205065518,7.22194148070324,7.89741849099523,6.52195779591728,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,0.25462585178142,4.31544206176216,2.7562988551756,1.92192989231657,14.3768206527355,4.83783231969054,1.5601883655728,3.78868316920668,7.89348619496414,4.82443521363367,4.0645701836653,1.13694847062291,0.814824882210129,2.54617628662782,2.34690248288502,2.01007508930179,3.80869825417622,3.31727201358258,2.99506773801763,3.10050565508285,2.71073106717728,2.94953966488328,5.87128938344045,4.77341893318988,0,0,4.91764273019036,6.62248191131358,4.49541651965817,3.7507739709505,1.14754461763673,1.26235463602186,0.94652465824877,0.390438744296638,2.36965737506079,0.238968797952552,0,0.849229592366497,1.21443210502468,1.75353514746787,1.97643888973262,3.85585579706168,2.2710413633323,1.42452482933804,1.79175655288934,3.29940245945071,6.63725691699814,3.39892890616974,3.02323556964751,5.84675747243284,3.2483208216885,3.68922177532713,5.16856586336442,7.63420831902762,3.56497378384721,6.0046984007805,8.4334886859999,7.21948802737308,5.7874732978144,1.8006109403131,1.4229455216103,1.50035924522115,1.95074257006501,1.78368817602071,1.97458824722545,2.74018454203139,3.28540391289194,2.54198485036584,8.82113592219848,2.80306630000516,3.39075296061402,2.5934557719107,4.77489376012546,3.28281799490123,3.78925087618806,4.45020724825223,0.512612642393558,0.412773735926445,0.740778109478847,0.376736914009382,0.27338845544205,1.14389086603261,2.03974115992626,1.6794174278839,1.93479963326193,0.954670618015114,0.949007980743406,3.45643094115643,1.94409613479242,1.46361807210128,1.74690050996942,2.83215127408124,3.88471241909079,3.66458318777641,5.31421390496351,5.59205381778233,0,2.54178128274764,1.15820943319968,1.55560950675238,2.97067593998782,3.04121025883401,3.0512882047896,4.03633593016245,2.20204623293993,1.20792060413003,0.576060012515731,0.632022241256357,2.02725215290164,3.59488350076895,2.33857481360031,1.61124026100733,1.58945083825012,0.480781798079875,1.03382669022204,1.31256384932592,0.914481679859998,0.806609481094724,0.584747284438515,0.577271049841977,1.28564592399726,4.53460767230423,4.66170502085536,5.9211145362254,3.02192309455341,5.60249822693352,4.69206188627955,2.38097111547445,1.2862102744744,12.0377304968487,1.6942555278512,1.38097570952153,3.43737308063638,2.06223818812425,4.11049511862385,6.0431511791176,3.37511250115903,5.40385443869065,4.07828168085784,7.7664046762773,0.518936737920883,0.798049746802062,0.341467211508268,0.972426868273176,1.67690530102386,1.10306105070008,2.22246727801615,1.64828045791115,0.64183841918363,1.76888048234658,1.52087579934144,2.64076877940507,1.68554713445788,1.85672941974121,1.83793500657962,2.38146845641537,2.43357084484197,1.73618298417335,2.47251540481984,2.06078488188156,1.37147700954166,0.70990322463735,1.90748951957857,1.88950341622027,1.59985946706062,2.28459441307527,1.28049581010941,2.63069711437843,1.35804113845862,3.36685362994643,1.30498519936592,3.44765688314472,2.04615521584845,0.929621047115796,0.964533054905707,1.49886346762768,2.33931608445408,3.00819475667618,0.57386499620653,1.98532277207564,0.927471342481686|short_description=p3@Ptpn3}}
|EntrezGene=545622
|HGNC=
|UniProt=Q14BS5
|association_with_transcript=0bp_to_ENSMUST00000043585,uc012deo.1_5end
|description=CAGE_peak_3_at_Ptpn3_5end
|id=chr4:57313196..57313230,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!3.79e-10!43;UBERON:0005177!3.25e-09!85;UBERON:0007023!1.26e-08!51;UBERON:0006554!1.63e-08!16;UBERON:0001008!6.74e-08!17;UBERON:0002113!2.23e-07!14;UBERON:0003918!2.23e-07!14;UBERON:0005095!2.23e-07!14;UBERON:0007687!2.23e-07!14;UBERON:0005409!2.59e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.36e-09,79;UBERON:0006554,1.02e-08,18;UBERON:0007023,1.21e-08,51;UBERON:0001008,3.86e-08,19;UBERON:0002113,1.46e-07,14;UBERON:0003918,1.46e-07,14;UBERON:0011143,1.46e-07,14;UBERON:0005095,1.46e-07,14;UBERON:0007687,1.46e-07,14
|phase1_expression=2.7225304007815,1.74487703819681,2.72999543633722,2.72217790176147,4.50806156951712,3.52546471014969,1.63528848416868,0,0.563154888606667,0,0.171217968225505,0.159544317990673,0.856003649656029,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,2.29616883407888,2.78014663362479,1.82839852397255,2.87986361028132,2.75291137280604,1.72269589234506,2.15380998079537,1.07735616342945,1.52018735565099,1.00812051903972,2.88249663851896,1.27006134691926,0.61506478758457,0,2.3108129580102,3.49092755252834,3.67504841272264,0.418531630736908,0,0,0.588231488031014,0,0,1.1330713617802,1.52065396829272,0.550640256485045,0.782391344348039,0,0.219686182734472,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.21389876515759,3.1739458756322,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0,1.42825492201902,0.662605622854841,0.244981598429908,0.0958454710182364,0,4.40463523997555,6.38436690425939,5.06901559745603,0.527545150920775,0.731901148819277,1.56274011167028,2.51264699101243,1.68828783009504,1.68078072554491,1.47314292736834,1.85083185038834,1.86399445825301,0.37863096666592,0.226714680320357,3.18850937571846,1.72084775396277,3.39985666853875,11.3337670243942,7.79731700937203,4.92829575807069,4.63466586434781,0.511290967734173,0.259786004602869,0.35333957451034,2.95771181531029,0,0,0,1.5154372870785,1.26679932737549,2.52762222507392,3.31133251185274,1.8125651855302,4.30482203287992,0.867426633830679,1.52232739156071,2.07553947530453,1.95939432718409,2.58695155698551,3.26733137457156,1.48316980640624,1.15679485535929,2.65383165584962,1.13236794963186,1.10420759230197,1.45462575940567,3.72783522436244,3.51336956413857,3.97948742945565,4.85368404896324,0.838705871541442,0,1.01656181658452,1.9472783122627,0.457500602818626,0,3.30266208365325,3.06858548796397,5.194701113989,5.19172041816825,3.25885964321012,2.86136032403214,10.108910337347,12.8369532090749,1.04096354370163,0,0.360124259610698,1.20563854268572,0.612328492361951,1.2811372028485,0.562210347358373,5.17406741478031,0.862271971731369,1.13463648100692,0.879755620819744,0.657587197282725,1.39023624612799,1.74126083261083,2.05782136407943,1.59227413454795,0.702213187313235,0,0.284163499395593,0.207125772535502,0.469052119962192,0.540186184383045,0.710234206755631,0.983821158737019,0.925602677324269,0.930135779001631,1.07309360559848,0.700592054203017,2.30383789878873,2.79084688934462,4.45878452502207,3.36259971078264,4.17145219052996,2.81833479396781,7.36014819974445,0.205809224758569,8.59088835757875,3.17340679996253,1.06644125267617,0.928946687441754,5.92790322081629,5.04208811558356,3.11329261382818,3.42406127002606,3.32170343081158,2.9645811850322,4.77536896720512,3.58121649674071,5.65395852645448,3.59527763461689,5.40345124686736,5.17767310461355,2.84501851429623,3.08470984046268,6.76246414038483,6.72049381889537,4.84881217919064,6.52263124979963,7.3986748435381,10.4803205065518,7.22194148070324,7.89741849099523,6.52195779591728,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,0.25462585178142,4.31544206176216,2.7562988551756,1.92192989231657,14.3768206527355,4.83783231969054,1.5601883655728,3.78868316920668,7.89348619496414,4.82443521363367,4.0645701836653,1.13694847062291,0.814824882210129,2.54617628662782,2.34690248288502,2.01007508930179,3.80869825417622,3.31727201358258,2.99506773801763,3.10050565508285,2.71073106717728,2.94953966488328,5.87128938344045,4.77341893318988,0,0,4.91764273019036,6.62248191131358,4.49541651965817,3.7507739709505,1.14754461763673,1.26235463602186,0.94652465824877,0.390438744296638,2.36965737506079,0.238968797952552,0,0.849229592366497,1.21443210502468,1.75353514746787,1.97643888973262,3.85585579706168,2.2710413633323,1.42452482933804,1.79175655288934,3.29940245945071,6.63725691699814,3.39892890616974,3.02323556964751,5.84675747243284,3.2483208216885,3.68922177532713,5.16856586336442,7.63420831902762,3.56497378384721,6.0046984007805,8.4334886859999,7.21948802737308,5.7874732978144,1.8006109403131,1.4229455216103,1.50035924522115,1.95074257006501,1.78368817602071,1.97458824722545,2.74018454203139,3.28540391289194,2.54198485036584,8.82113592219848,2.80306630000516,3.39075296061402,2.5934557719107,4.77489376012546,3.28281799490123,3.78925087618806,4.45020724825223,0.512612642393558,0.412773735926445,0.740778109478847,0.376736914009382,0.27338845544205,1.14389086603261,2.03974115992626,1.6794174278839,1.93479963326193,0.954670618015114,0.949007980743406,3.45643094115643,1.94409613479242,1.46361807210128,1.74690050996942,2.83215127408124,3.88471241909079,3.66458318777641,5.31421390496351,5.59205381778233,0,2.54178128274764,1.15820943319968,1.55560950675238,2.97067593998782,3.04121025883401,3.0512882047896,4.03633593016245,2.20204623293993,1.20792060413003,0.576060012515731,0.632022241256357,2.02725215290164,3.59488350076895,2.33857481360031,1.61124026100733,1.58945083825012,0.480781798079875,1.03382669022204,1.31256384932592,0.914481679859998,0.806609481094724,0.584747284438515,0.577271049841977,1.28564592399726,4.53460767230423,4.66170502085536,5.9211145362254,3.02192309455341,5.60249822693352,4.69206188627955,2.38097111547445,1.2862102744744,12.0377304968487,1.6942555278512,1.38097570952153,3.43737308063638,2.06223818812425,4.11049511862385,6.0431511791176,3.37511250115903,5.40385443869065,4.07828168085784,7.7664046762773,0.518936737920883,0.798049746802062,0.341467211508268,0.972426868273176,1.67690530102386,1.10306105070008,2.22246727801615,1.64828045791115,0.64183841918363,1.76888048234658,1.52087579934144,2.64076877940507,1.68554713445788,1.85672941974121,1.83793500657962,2.38146845641537,2.43357084484197,1.73618298417335,2.47251540481984,2.06078488188156,1.37147700954166,0.70990322463735,1.90748951957857,1.88950341622027,1.59985946706062,2.28459441307527,1.28049581010941,2.63069711437843,1.35804113845862,3.36685362994643,1.30498519936592,3.44765688314472,2.04615521584845,0.929621047115796,0.964533054905707,1.49886346762768,2.33931608445408,3.00819475667618,0.57386499620653,1.98532277207564,0.927471342481686
|short_description=p3@Ptpn3
}}

Revision as of 05:15, 14 September 2013

Short description:p3@Ptpn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ptpn3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000043585, uc012deo.1_5end
EntrezGene:Ptpn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ptpn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D57.40
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.92
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.36e-0979
urinary system structure1.02e-0818
adult organism1.21e-0851
renal system3.86e-0819
kidney1.46e-0714
kidney mesenchyme1.46e-0714
upper urinary tract1.46e-0714
kidney rudiment1.46e-0714
kidney field1.46e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:57313196..57313230,-&oldid=3012182"