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FFCP PHASE1:Mm9::chr5:101001211..101001230,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=231507|HGNC=|MCL_coexpression_id=1558|UniProt=Q9JI48|association_with_transcript=0bp_to_ENSMUST00000144595,NM_139198,uc008yht.1_5end|description=CAGE_peak_1_at_Plac8_5end|id=chr5:101001211..101001230,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.54e-17!59;UBERON:0004119!1.94e-15!130;UBERON:0000925!1.94e-15!130;UBERON:0006595!1.94e-15!130;UBERON:0001007!1.44e-14!128;UBERON:0001555!1.44e-14!128;UBERON:0007026!1.44e-14!128;UBERON:0004921!1.59e-13!126;UBERON:0004185!1.59e-13!126;UBERON:0004923!3.67e-12!24;UBERON:0000160!5.70e-12!43;UBERON:0000344!1.19e-09!15;UBERON:0001242!2.00e-08!13;UBERON:0000060!2.00e-08!13;UBERON:0001262!2.00e-08!13;UBERON:0004786!2.00e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.66e-20,47;UBERON:0004119,1.75e-16,118;UBERON:0000925,1.75e-16,118;UBERON:0006595,1.75e-16,118;UBERON:0000160,6.57e-16,31;UBERON:0001007,1.40e-15,116;UBERON:0001555,1.40e-15,116;UBERON:0007026,1.40e-15,116;UBERON:0004921,1.72e-14,114;UBERON:0004923,3.02e-12,24;UBERON:0000344,1.02e-09,15;UBERON:0001242,1.76e-08,13;UBERON:0001262,1.76e-08,13;UBERON:0004786,1.76e-08,13|phase1_expression=1.76163731815273,774.725404959382,807.168650677037,643.341377449627,808.946603863351,394.348409721029,381.723054733089,1.67860320474049,0.281577444303333,0,0.171217968225505,0,0.342401459862411,0.174840804837995,57.6279887941096,91.7212961275912,23.785103856357,430.921317879353,385.017329564914,436.272562048375,40.3105195316071,1484.99546616044,1608.7295013067,1050.99022532989,955.030837082629,1232.30179499083,1210.87197120316,791.42583765527,1079.90309277057,1376.08450848922,787.365043336987,0,0,0,432.988578007161,619.722757896459,565.3449474905,440.713807165964,981.357192721893,783.715044728776,205.292789322824,252.726829434625,318.980301941468,0,0.101376931219515,14.1330999164495,8.60630478782843,0,0,0,9.51907667052465,0,411.067384841454,8.70434570413613,59.8246962473586,11.3194151855817,14.8997388768154,24.2365883370398,0,0,0.633831403506179,12.876092218627,24.9002542911119,12.1486461832989,10.8775299882367,12.0781619540837,3.29560121570245,0,0.207379224616955,0,0.420649922702764,1.42825492201902,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.837548997004143,1.12552522006336,0.916789486660861,1.76777151284201,1.28134512719193,0.186399445825301,3.55913108665965,2.56943304363071,29.5661778475711,34.4169550792555,0,0.539703191637817,3.24888208723835,0,61.9359892781026,0,1.03914401841148,0,0.14084341977668,0,0,0,33.5561113567382,28.376304933211,32.8590889259609,261.595268436366,56.1895207514363,8.31275978763019,14.5727674483554,6.69824052286711,7.61031140944993,12.3592565253151,15.2865319276416,5.90632979249475,35.8432703214842,13.158541479712,179.575942045824,12.7795811458453,39.7514733228708,52.8514025917392,272.131971378458,0,0.209446706813455,838.410055194597,2124.44197261447,2269.43203134806,2533.90739806398,0,0,0.125654352112864,0,0,0,0.162241263067758,20.6733908616142,75.3906241897164,4.29628689337247,4.20883711772948,0.910843100738926,0.689706313300419,0.720248519221397,2.10986744970001,1.49680298132921,1.40925092313335,1.59292931751539,1.55222022443409,0.862271971731369,1.13463648100692,1.23165786914764,1.53437012699302,2.22437799380478,2.089512999133,3.90986059175093,29.0590029555,2119.27939931134,2298.37415844152,1925.49187190454,2.27838349789052,4.45599513964083,1.98068267607116,1.65721314909647,3.93528463494808,1.69693824176116,0.697601834251224,1.87791380979733,1.86824547787471,1.48103864922132,3.447516745661,1.4592385718254,2.04679982395465,6.14740322814942,1.07365135008297,0,0.411618449517138,1404.94066524711,849.150769556641,15.5700422890721,33.906554091624,79.6400910970537,144.80877067956,179.014325295121,253.190308355816,846.559845795409,385.724951963633,474.772209423709,435.913630242161,352.495069511369,647.14997423104,745.027857918071,917.642987156124,32.0538752610708,26.3914064128474,15.7790829942313,31.3623044881784,39.5663073821957,31.5611189506434,15.8723708181886,7.82333784291891,7.06494275286187,6.91024117962083,9.48648406678877,9.84386123724955,19.0662225259807,27.2083155985673,26.3718157805054,34.729511004348,40.2308845814643,64.7316309264324,64.6919554832391,38.1640364331433,40.2550978276593,33.4926852901653,23.0907878104775,8.84026072814891,7.71408878144222,8.68398338454061,69.2824463124768,7.39016505904891,1.79261474086228,5.94107800213158,5.63256595892405,5.02518772325447,9.52174563544055,14.4398899414771,29.6354070919639,30.7835918611797,17.2211150150086,46.3733180645539,45.2434652488646,24.590339958857,0,1.08781136763742,3.44234991113325,11.5893433447988,0,0.234423373184406,0,6.5642441073137,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0,0,0,21.2910127812403,7.47875535402472,10.750539317336,99.9718945213565,6.63725691699814,5.34117399540959,11.4882951646605,5.65815239267694,5.61073596473468,16.6014979889721,99.2364645765969,17.4496190149203,16.3988794056972,7.58488219045958,4.21674434299995,6.18813259489121,2.04263763452273,1.44048875225048,1.81102157295856,2.57204442037911,2.12808280370728,1.96205699362278,3.62007845324666,15.22324745573,548.193110036827,227.083979966015,2.42581237860458,8.90385765883992,3.71368181400583,1.99032652262914,1.19372344003136,1.31312719796049,739.778363366561,0.556275906031529,141.822831062218,69.7587613715692,96.6715432869895,97.5748607284299,59.735377514088,81.6738078347286,449.762925763741,505.084791436082,420.680720260666,237.712983885763,18.5056556244964,36.3941846157059,124.422152626715,110.189531999625,158.749583843471,55.4292463641613,59.5104881222419,80.3590741890971,352.81195730026,13.6694648879124,0.56369293868419,6.27969493384711,6.783798108741,6.02798683866548,12.2701832303845,15.3750074196608,33.9162419686229,4.03633593016245,3.56521771047417,2.41584120826006,1.72818003754719,28.441000856536,182.858144191728,243.424968480641,180.979706408068,75.7282922673447,54.8360539196291,53.2465841373462,44.8976162610715,42.3049425282739,33.8358221548199,24.1982844328417,30.4068587908028,31.9423314245894,35.530578263197,3.40095575422817,12.4312133889476,2.78112955489375,9.73730774911655,15.261977928543,243.611853135634,246.522086263739,28.5109944175158,5.517293144389,0,0,0,0,0,0.755393897389701,0,0,0,0,1.86817225651518,2.79317411380722,5.12200817262403,10.6966955510049,11.738337107167,20.2227859295016,17.7797382241292,18.7491902087394,17.6505565275498,19.4576853058124,22.5596576902313,17.7308760902912,20.7884146583139,16.3264138632417,16.3116731833942,19.528041342606,12.863160179879,15.2398284166327,24.7251540481984,14.2782952530365,21.2578936478958,25.0240886684666,22.8898742349428,21.8019624948493,19.0100948438968,17.8536822651437,15.1830217484401,17.6256706663355,21.1854417599544,14.5896990631012,17.0834426098811,14.4801589092078,13.0953933814301,21.6911577660352,17.1686883773216,2.99772693525535,24.7967504952133,34.1644975936794,8.99055160723564,26.4709702943419,21.3318408770788|short_description=p1@Plac8}}
|EntrezGene=231507
|HGNC=
|MCL_coexpression_id=1558
|UniProt=Q9JI48
|association_with_transcript=0bp_to_ENSMUST00000144595,NM_139198,uc008yht.1_5end
|description=CAGE_peak_1_at_Plac8_5end
|id=chr5:101001211..101001230,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!7.54e-17!59;UBERON:0004119!1.94e-15!130;UBERON:0000925!1.94e-15!130;UBERON:0006595!1.94e-15!130;UBERON:0001007!1.44e-14!128;UBERON:0001555!1.44e-14!128;UBERON:0007026!1.44e-14!128;UBERON:0004921!1.59e-13!126;UBERON:0004185!1.59e-13!126;UBERON:0004923!3.67e-12!24;UBERON:0000160!5.70e-12!43;UBERON:0000344!1.19e-09!15;UBERON:0001242!2.00e-08!13;UBERON:0000060!2.00e-08!13;UBERON:0001262!2.00e-08!13;UBERON:0004786!2.00e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.66e-20,47;UBERON:0004119,1.75e-16,118;UBERON:0000925,1.75e-16,118;UBERON:0006595,1.75e-16,118;UBERON:0000160,6.57e-16,31;UBERON:0001007,1.40e-15,116;UBERON:0001555,1.40e-15,116;UBERON:0007026,1.40e-15,116;UBERON:0004921,1.72e-14,114;UBERON:0004923,3.02e-12,24;UBERON:0000344,1.02e-09,15;UBERON:0001242,1.76e-08,13;UBERON:0001262,1.76e-08,13;UBERON:0004786,1.76e-08,13
|phase1_expression=1.76163731815273,774.725404959382,807.168650677037,643.341377449627,808.946603863351,394.348409721029,381.723054733089,1.67860320474049,0.281577444303333,0,0.171217968225505,0,0.342401459862411,0.174840804837995,57.6279887941096,91.7212961275912,23.785103856357,430.921317879353,385.017329564914,436.272562048375,40.3105195316071,1484.99546616044,1608.7295013067,1050.99022532989,955.030837082629,1232.30179499083,1210.87197120316,791.42583765527,1079.90309277057,1376.08450848922,787.365043336987,0,0,0,432.988578007161,619.722757896459,565.3449474905,440.713807165964,981.357192721893,783.715044728776,205.292789322824,252.726829434625,318.980301941468,0,0.101376931219515,14.1330999164495,8.60630478782843,0,0,0,9.51907667052465,0,411.067384841454,8.70434570413613,59.8246962473586,11.3194151855817,14.8997388768154,24.2365883370398,0,0,0.633831403506179,12.876092218627,24.9002542911119,12.1486461832989,10.8775299882367,12.0781619540837,3.29560121570245,0,0.207379224616955,0,0.420649922702764,1.42825492201902,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.837548997004143,1.12552522006336,0.916789486660861,1.76777151284201,1.28134512719193,0.186399445825301,3.55913108665965,2.56943304363071,29.5661778475711,34.4169550792555,0,0.539703191637817,3.24888208723835,0,61.9359892781026,0,1.03914401841148,0,0.14084341977668,0,0,0,33.5561113567382,28.376304933211,32.8590889259609,261.595268436366,56.1895207514363,8.31275978763019,14.5727674483554,6.69824052286711,7.61031140944993,12.3592565253151,15.2865319276416,5.90632979249475,35.8432703214842,13.158541479712,179.575942045824,12.7795811458453,39.7514733228708,52.8514025917392,272.131971378458,0,0.209446706813455,838.410055194597,2124.44197261447,2269.43203134806,2533.90739806398,0,0,0.125654352112864,0,0,0,0.162241263067758,20.6733908616142,75.3906241897164,4.29628689337247,4.20883711772948,0.910843100738926,0.689706313300419,0.720248519221397,2.10986744970001,1.49680298132921,1.40925092313335,1.59292931751539,1.55222022443409,0.862271971731369,1.13463648100692,1.23165786914764,1.53437012699302,2.22437799380478,2.089512999133,3.90986059175093,29.0590029555,2119.27939931134,2298.37415844152,1925.49187190454,2.27838349789052,4.45599513964083,1.98068267607116,1.65721314909647,3.93528463494808,1.69693824176116,0.697601834251224,1.87791380979733,1.86824547787471,1.48103864922132,3.447516745661,1.4592385718254,2.04679982395465,6.14740322814942,1.07365135008297,0,0.411618449517138,1404.94066524711,849.150769556641,15.5700422890721,33.906554091624,79.6400910970537,144.80877067956,179.014325295121,253.190308355816,846.559845795409,385.724951963633,474.772209423709,435.913630242161,352.495069511369,647.14997423104,745.027857918071,917.642987156124,32.0538752610708,26.3914064128474,15.7790829942313,31.3623044881784,39.5663073821957,31.5611189506434,15.8723708181886,7.82333784291891,7.06494275286187,6.91024117962083,9.48648406678877,9.84386123724955,19.0662225259807,27.2083155985673,26.3718157805054,34.729511004348,40.2308845814643,64.7316309264324,64.6919554832391,38.1640364331433,40.2550978276593,33.4926852901653,23.0907878104775,8.84026072814891,7.71408878144222,8.68398338454061,69.2824463124768,7.39016505904891,1.79261474086228,5.94107800213158,5.63256595892405,5.02518772325447,9.52174563544055,14.4398899414771,29.6354070919639,30.7835918611797,17.2211150150086,46.3733180645539,45.2434652488646,24.590339958857,0,1.08781136763742,3.44234991113325,11.5893433447988,0,0.234423373184406,0,6.5642441073137,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0,0,0,0,0,21.2910127812403,7.47875535402472,10.750539317336,99.9718945213565,6.63725691699814,5.34117399540959,11.4882951646605,5.65815239267694,5.61073596473468,16.6014979889721,99.2364645765969,17.4496190149203,16.3988794056972,7.58488219045958,4.21674434299995,6.18813259489121,2.04263763452273,1.44048875225048,1.81102157295856,2.57204442037911,2.12808280370728,1.96205699362278,3.62007845324666,15.22324745573,548.193110036827,227.083979966015,2.42581237860458,8.90385765883992,3.71368181400583,1.99032652262914,1.19372344003136,1.31312719796049,739.778363366561,0.556275906031529,141.822831062218,69.7587613715692,96.6715432869895,97.5748607284299,59.735377514088,81.6738078347286,449.762925763741,505.084791436082,420.680720260666,237.712983885763,18.5056556244964,36.3941846157059,124.422152626715,110.189531999625,158.749583843471,55.4292463641613,59.5104881222419,80.3590741890971,352.81195730026,13.6694648879124,0.56369293868419,6.27969493384711,6.783798108741,6.02798683866548,12.2701832303845,15.3750074196608,33.9162419686229,4.03633593016245,3.56521771047417,2.41584120826006,1.72818003754719,28.441000856536,182.858144191728,243.424968480641,180.979706408068,75.7282922673447,54.8360539196291,53.2465841373462,44.8976162610715,42.3049425282739,33.8358221548199,24.1982844328417,30.4068587908028,31.9423314245894,35.530578263197,3.40095575422817,12.4312133889476,2.78112955489375,9.737307749116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|short_description=p1@Plac8
}}

Revision as of 05:43, 14 September 2013

Short description:p1@Plac8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plac8_5end
Coexpression cluster:MCL_coexpression_mm9:1558
Association with transcript: 0bp_to_ENSMUST00000144595, NM_139198, uc008yht.1_5end
EntrezGene:Plac8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plac8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5774.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6807.17
CD326+ enterocyte, pool1.CNhs13542.11848-124I3643.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I4808.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7394.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8381.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A157.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A391.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2430.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4385.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6436.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21485.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91608.73
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11050.99
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2955.03
GP2+ M cell, pool1.CNhs13228.11845-124H91232.30
GP2+ M cell, pool2.CNhs13231.11846-124I11210.87
GP2+ M cell, pool3.CNhs13240.11847-124I2791.43
Ileum epithelium, pool1.CNhs13199.10252-104B91079.90
Ileum epithelium, pool2.CNhs13232.10253-104C11376.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8787.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5432.99
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6619.72
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7565.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8440.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1981.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3783.72
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9205.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2252.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4318.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.13
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2411.07
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A159.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.24
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A761.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G133.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G228.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.86
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6261.60
accessory axillary lymph node, adult.CNhs10475.1063-29H956.19
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C514.57
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F512.36
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A835.84
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G2179.58
bone (os femoris), neonate N02.CNhs11227.1985-43F512.78
bone (os femoris), neonate N16.CNhs11225.1525-43A639.75
bone (os femoris), neonate N20.CNhs11195.1350-25C352.85
cecum, adult.CNhs10467.37-13H4272.13
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H7838.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72124.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12269.43
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42533.91
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A275.39
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I629.06
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82119.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22298.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51925.49
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I31404.94
intestine, adult.CNhs10496.178-9A3849.15
intestine, embryo E12.CNhs11019.1251-16I515.57
intestine, embryo E13.CNhs11010.381-16D533.91
intestine, embryo E15.CNhs10602.976-16D879.64
intestine, embryo E16.CNhs10585.463-22H4144.81
intestine, embryo E17.CNhs10582.482-18D3179.01
intestine, embryo E18.CNhs10526.1289-20F7253.19
intestine, neonate N00.CNhs11126.644-26D1846.56
intestine, neonate N01.CNhs11192.1322-23E9385.72
intestine, neonate N06.CNhs11102.688-20B8474.77
intestine, neonate N07.CNhs11095.720-20F2435.91
intestine, neonate N10.CNhs11098.755-23A5352.50
intestine, neonate N20.CNhs11187.827-18D1647.15
intestine, neonate N25.CNhs11121.1352-25E3745.03
intestine, neonate N30.CNhs11131.1384-42G1917.64
kidney, embryo E14.CNhs10606.411-4I932.05
kidney, embryo E15.CNhs10997.434-16F826.39
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I231.36
kidney, embryo E18.CNhs11001.1288-20C739.57
kidney, neonate N00.CNhs11214.646-21G731.56
kidney, neonate N10.CNhs11206.758-6D515.87
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H619.07
liver, embryo E14.CNhs10594.409-16E127.21
liver, embryo E15.CNhs10520.433-16D726.37
liver, embryo E16.CNhs10523.462-17F534.73
liver, embryo E17.CNhs10510.481-18A340.23
liver, embryo E18.CNhs10579.499-43G464.73
liver, neonate N00.CNhs11117.641-24F464.69
liver, neonate N03.CNhs11123.1345-25G238.16
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H233.49
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B169.28
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E529.64
lung, neonate N07.CNhs11111.715-19A330.78
lung, neonate N10.CNhs11219.750-23E617.22
lung, neonate N20.CNhs11109.822-18A446.37
lung, neonate N25.CNhs11119.1359-25C745.24
lung, neonate N30.CNhs11133.1394-42H224.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I721.29
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G699.97
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F211.49
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G999.24
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I7548.19
placenta, adult pregnant day17.CNhs10464.577-18G3227.08
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I1739.78
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G2141.82
spleen, embryo E16.CNhs11035.461-43C169.76
spleen, embryo E18.CNhs11011.1271-21F296.67
spleen, neonate N10.CNhs11116.752-24D197.57
spleen, neonate N20.CNhs11112.824-19H159.74
spleen, neonate N25.CNhs11099.1354-25G381.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6449.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9505.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3420.68
stomach, adult.CNhs10503.33-1H6237.71
stomach, embryo E12.CNhs10588.356-43E318.51
stomach, embryo E15.CNhs10603.1252-16G836.39
stomach, embryo E16.CNhs11022.459-17D4124.42
stomach, embryo E17.CNhs11006.1035-18D5110.19
stomach, embryo E18.CNhs10999.1286-20C6158.75
stomach, neonate N03.CNhs11193.1340-24B855.43
stomach, neonate N07.CNhs11210.718-18A959.51
stomach, neonate N25.CNhs11104.1355-25E480.36
stomach, neonate N30.CNhs11134.1386-42I1352.81
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I512.27
testis, embryo E18.CNhs11027.503-18G515.38
testis, neonate N00.CNhs11189.1300-22B733.92
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B528.44
thymus, embryo E14.CNhs11041.402-44I4182.86
thymus, embryo E15.CNhs11005.430-45I2243.42
thymus, embryo E16.CNhs11002.456-26C5180.98
thymus, embryo E17.CNhs10581.478-18C175.73
thymus, embryo E18.CNhs10595.1273-19G454.84
thymus, neonate N02.CNhs11181.1541-43F853.25
thymus, neonate N03.CNhs11137.2104-43C744.90
thymus, neonate N06.CNhs11197.681-26C442.30
thymus, neonate N07.CNhs11211.713-19D333.84
thymus, neonate N10.CNhs11194.748-24E424.20
thymus, neonate N20.CNhs11186.820-7A230.41
thymus, neonate N25.CNhs11125.1362-25G731.94
thymus, neonate N30.CNhs11132.1393-42G235.53
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.74
urinary bladder, adult.CNhs10481.879-12E415.26
uterus, adult pregnant day19.CNhs10497.590-15F5243.61
uterus, adult.CNhs10509.92-27E5246.52
vagina, adult.CNhs10502.89-27D528.51
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F220.22
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.69
whole body, embryo E17.5.CNhs10513.490-9F917.17
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C234.16
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D126.47
whole body, neonate N10.CNhs10518.761-6B421.33





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.66e-2047
endoderm-derived structure1.75e-16118
endoderm1.75e-16118
presumptive endoderm1.75e-16118
intestine6.57e-1631
digestive system1.40e-15116
digestive tract1.40e-15116
primitive gut1.40e-15116
subdivision of digestive tract1.72e-14114
organ component layer3.02e-1224
mucosa1.02e-0915
intestinal mucosa1.76e-0813
wall of intestine1.76e-0813
gastrointestinal system mucosa1.76e-0813







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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