FFCP PHASE1:Mm9::chr5:125079680..125079694,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21871|HGNC=|MCL_coexpression_id=24|UniProt=P15920|association_with_transcript=7bp_to_ENSMUST00000037865_5end|description=CAGE_peak_2_at_Atp6v0a2_5end|id=chr5:125079680..125079694,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-08,6;CL:0000677,1.83e-08,6;CL:0000584,1.83e-08,6;CL:0002563,4.21e-08,9;CL:0002251,4.21e-08,9;CL:0000066,1.38e-07,25;CL:0000075,4.95e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.49e-10!15;UBERON:0005409!4.20e-09!59;UBERON:0000160!9.92e-09!43;UBERON:0001242!1.31e-08!13;UBERON:0000060!1.31e-08!13;UBERON:0001262!1.31e-08!13;UBERON:0004786!1.31e-08!13;UBERON:0000064!3.18e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-22,31;UBERON:0000344,1.11e-14,15;UBERON:0005409,8.73e-14,47;UBERON:0001242,1.58e-12,13;UBERON:0001262,1.58e-12,13;UBERON:0004786,1.58e-12,13;UBERON:0001007,8.47e-09,116;UBERON:0001555,8.47e-09,116;UBERON:0007026,8.47e-09,116;UBERON:0004119,2.00e-08,118;UBERON:0000925,2.00e-08,118;UBERON:0006595,2.00e-08,118;UBERON:0003350,4.21e-08,9;UBERON:0004808,4.21e-08,9;UBERON:0001277,4.21e-08,9;UBERON:0004921,1.05e-07,114;UBERON:0004923,2.07e-07,24;UBERON:0011216,3.56e-07,194|phase1_expression=0.640595388419176,19.8915982354436,15.0149748998547,28.7341000741489,37.0662840160297,8.2260843236826,6.07392865548367,0.645616617207881,2.25261955442667,2.10658073689794,0.34243593645101,0.239316476986009,0.684802919724823,0.611942816932982,0.333109761815663,0.404950534779652,0,0.473193248037357,0.411343300817216,1.27316895539409,0.510259740906419,0.198581902401771,0.261199789138935,7.99962113967033,7.79991555628378,15.5042630311055,17.6612418425221,13.3592164265251,13.4916627814025,13.8616571367962,8.20402889424627,0.635030673459631,1.23012957516914,0,1.1554064790051,0.831173226792462,1.63335485009895,0,0,0,0.588231488031014,0,0,0.251793635951155,0.506884656097573,0.367093504323363,0,1.96222640742402,1.31811709640683,2.3331587888914,0.699932108126813,1.43752564364972,0.503347818173209,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,0,0,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,3.59520132622086,3.45796474789399,0.311068836925433,0.540023753326763,0.210324961351382,2.28520787523043,1.10434270475807,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,0.46081959976873,0.131886287730194,0.914876436024097,1.04182674111352,1.11673199600552,0.56276261003168,1.37518422999129,1.17851434189467,0.711858403995515,0.745597783301202,0.530083353332288,0.906858721281426,2.6087803983151,1.72084775396277,0,1.61910957491345,0.649776417447669,1.34408066129201,1.68533304158102,0.170430322578058,0.779358013808606,0.35333957451034,0.845060518660083,0,0,7.11066703153331,0.865964164044856,0,0,2.51204535381932,1.55362730188303,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.753999547978053,0,0.433798070759735,1.76922110389975,0.808834249737046,0.220841518460394,1.45462575940567,5.59175283654366,0,0.628340120440365,6.64188343542338,0.359445373517761,0,0.254140454146129,0.449371918214468,0.457500602818626,0.502617408451458,0.521472960576829,0.767146371990992,1.0389402227978,0.486723789203273,0.203678727700633,0.373220911830279,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.219195732427575,0,0.696504333044333,1.4404749548556,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.938104239924385,0,0.23674473558521,0,0,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,0.308713837137853,12.2254949704005,8.72686869989696,0,0.464473343720877,0.644337306610467,1.4117846723634,1.11189021922435,2.66315876557583,4.74529061544512,2.47048432086016,1.75934646160189,1.39269530428806,2.14460495831032,7.19055526923377,5.40345124686736,7.36822711041159,0.758671603812327,0.114248512609729,0,0.407302655690628,0,0.631222379012867,0.316182685621286,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0,1.01031551178845,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.578596234326046,0,0.54390568381871,0.983528546038072,2.20749397043786,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0,0,0.222798674082394,0.566153061577665,1.21443210502468,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,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| ||
|EntrezGene=21871 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=P15920 | |||
|association_with_transcript=7bp_to_ENSMUST00000037865_5end | |||
|description=CAGE_peak_2_at_Atp6v0a2_5end | |||
|id=chr5:125079680..125079694,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-08,6;CL:0000677,1.83e-08,6;CL:0000584,1.83e-08,6;CL:0002563,4.21e-08,9;CL:0002251,4.21e-08,9;CL:0000066,1.38e-07,25;CL:0000075,4.95e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.49e-10!15;UBERON:0005409!4.20e-09!59;UBERON:0000160!9.92e-09!43;UBERON:0001242!1.31e-08!13;UBERON:0000060!1.31e-08!13;UBERON:0001262!1.31e-08!13;UBERON:0004786!1.31e-08!13;UBERON:0000064!3.18e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-22,31;UBERON:0000344,1.11e-14,15;UBERON:0005409,8.73e-14,47;UBERON:0001242,1.58e-12,13;UBERON:0001262,1.58e-12,13;UBERON:0004786,1.58e-12,13;UBERON:0001007,8.47e-09,116;UBERON:0001555,8.47e-09,116;UBERON:0007026,8.47e-09,116;UBERON:0004119,2.00e-08,118;UBERON:0000925,2.00e-08,118;UBERON:0006595,2.00e-08,118;UBERON:0003350,4.21e-08,9;UBERON:0004808,4.21e-08,9;UBERON:0001277,4.21e-08,9;UBERON:0004921,1.05e-07,114;UBERON:0004923,2.07e-07,24;UBERON:0011216,3.56e-07,194 | |||
|phase1_expression=0.640595388419176,19.8915982354436,15.0149748998547,28.7341000741489,37.0662840160297,8.2260843236826,6.07392865548367,0.645616617207881,2.25261955442667,2.10658073689794,0.34243593645101,0.239316476986009,0.684802919724823,0.611942816932982,0.333109761815663,0.404950534779652,0,0.473193248037357,0.411343300817216,1.27316895539409,0.510259740906419,0.198581902401771,0.261199789138935,7.99962113967033,7.79991555628378,15.5042630311055,17.6612418425221,13.3592164265251,13.4916627814025,13.8616571367962,8.20402889424627,0.635030673459631,1.23012957516914,0,1.1554064790051,0.831173226792462,1.63335485009895,0,0,0,0.588231488031014,0,0,0.251793635951155,0.506884656097573,0.367093504323363,0,1.96222640742402,1.31811709640683,2.3331587888914,0.699932108126813,1.43752564364972,0.503347818173209,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,0,0,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,3.59520132622086,3.45796474789399,0.311068836925433,0.540023753326763,0.210324961351382,2.28520787523043,1.10434270475807,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,0.46081959976873,0.131886287730194,0.914876436024097,1.04182674111352,1.11673199600552,0.56276261003168,1.37518422999129,1.17851434189467,0.711858403995515,0.745597783301202,0.530083353332288,0.906858721281426,2.6087803983151,1.72084775396277,0,1.61910957491345,0.649776417447669,1.34408066129201,1.68533304158102,0.170430322578058,0.779358013808606,0.35333957451034,0.845060518660083,0,0,7.11066703153331,0.865964164044856,0,0,2.51204535381932,1.55362730188303,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.753999547978053,0,0.433798070759735,1.76922110389975,0.808834249737046,0.220841518460394,1.45462575940567,5.59175283654366,0,0.628340120440365,6.64188343542338,0.359445373517761,0,0.254140454146129,0.449371918214468,0.457500602818626,0.502617408451458,0.521472960576829,0.767146371990992,1.0389402227978,0.486723789203273,0.203678727700633,0.373220911830279,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.219195732427575,0,0.696504333044333,1.4404749548556,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.938104239924385,0,0.23674473558521,0,0,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.420579897128254,0.308713837137853,12.2254949704005,8.72686869989696,0,0.464473343720877,0.644337306610467,1.4117846723634,1.11189021922435,2.66315876557583,4.74529061544512,2.47048432086016,1.75934646160189,1.39269530428806,2.14460495831032,7.19055526923377,5.40345124686736,7.36822711041159,0.758671603812327,0.114248512609729,0,0.407302655690628,0,0.631222379012867,0.316182685621286,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0,1.01031551178845,0.358794827043824,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.578596234326046,0,0.54390568381871,0.983528546038072,2.20749397043786,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0,0,0.222798674082394,0.566153061577665,1.21443210502468,0.292255857911312,0,0.642642632843614,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,2.84271122485043,0,0,0.632073515871632,1.05418608574999,0,0.680879211507576,1.08036656418786,0,0,0,0.178368817602071,0.329098041204242,1.8267896946876,0.469343416127421,0,0,1.97863503529776,1.77610869365496,1.56813604813205,1.79058516004705,2.79039529566604,5.24665505933731,0.370850604021019,0.512612642393558,0.412773735926445,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,0.632671987162271,0.813277868507395,0.216010681643603,1.25452977608681,0.87345025498471,0.944050424693745,0.578574190077352,0.785267825952089,5.05498395837992,0.621339313086926,0,0,0.330916980914195,0.388902376688095,0,0,0,0.39061315453185,0.209718688851422,1.20792060413003,0,1.58005560314089,0.202725215290164,0,0.129920822977795,0,0.596044064343795,0.841368146639782,1.03382669022204,0.807731599585181,0.685861259894999,1.51239277705261,2.63136277997332,2.30908419936791,1.28564592399726,2.26730383615211,0,0.0897138566094757,0,0,0.563047426353546,1.09890974560359,3.64426244434412,0,1.6942555278512,0.920650473014354,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.749132059759059,0.512201219238954,1.03383844120104,0.952587382566147,0.927074607558844,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0,0.726732083161643,0.941093804153306,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,0,0.355905054372522,0.591026894253381,0.409231043169689,0.619747364743864,0.578719832943424,0,0.467863216890817,0,0.382576664137687,0.441182838239031,0.927471342481686 | |||
|short_description=p2@Atp6v0a2 | |||
}} | |||
Revision as of 06:28, 14 September 2013
| Short description: | p2@Atp6v0a2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Atp6v0a2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | 7bp_to_ENSMUST00000037865_5end |
| EntrezGene: | Atp6v0a2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brush border epithelial cell | 1.83e-08 | 6 |
| gut absorptive cell | 1.83e-08 | 6 |
| enterocyte | 1.83e-08 | 6 |
| intestinal epithelial cell | 4.21e-08 | 9 |
| epithelial cell of alimentary canal | 4.21e-08 | 9 |
| epithelial cell | 1.38e-07 | 25 |
| columnar/cuboidal epithelial cell | 4.95e-07 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 2.12e-22 | 31 |
| mucosa | 1.11e-14 | 15 |
| gastrointestinal system | 8.73e-14 | 47 |
| intestinal mucosa | 1.58e-12 | 13 |
| wall of intestine | 1.58e-12 | 13 |
| gastrointestinal system mucosa | 1.58e-12 | 13 |
| digestive system | 8.47e-09 | 116 |
| digestive tract | 8.47e-09 | 116 |
| primitive gut | 8.47e-09 | 116 |
| endoderm-derived structure | 2.00e-08 | 118 |
| endoderm | 2.00e-08 | 118 |
| presumptive endoderm | 2.00e-08 | 118 |
| epithelium of mucosa | 4.21e-08 | 9 |
| gastrointestinal system epithelium | 4.21e-08 | 9 |
| intestinal epithelium | 4.21e-08 | 9 |
| subdivision of digestive tract | 1.05e-07 | 114 |
| organ component layer | 2.07e-07 | 24 |
| organ system subdivision | 3.56e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
