FFCP PHASE1:Mm9::chr5:125342327..125342334,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=215707|HGNC=|MCL_coexpression_id=0|UniProt=D6RJ58|association_with_transcript=-72bp_to_ENSMUST00000135495_5end|description=CAGE_peak_17_at_Ccdc92_5end|id=chr5:125342327..125342334,-|ontology_enrichment_celltype=CL:0002610!7.10e-09!3;CL:0002614!7.76e-09!3|ontology_enrichment_celltype_v019_2=CL:0002610,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002950!1.04e-13!4;UBERON:0001891!1.04e-13!4;UBERON:0009616!1.04e-13!4;UBERON:0002298!2.51e-09!6;UBERON:0004684!7.10e-09!3;UBERON:0002275!7.10e-09!3;UBERON:0002038!7.76e-09!3;UBERON:0002308!7.76e-09!3;UBERON:0009663!7.76e-09!3;UBERON:0009661!7.76e-09!3;UBERON:0006331!7.76e-09!3;UBERON:0000125!7.76e-09!3;UBERON:0002420!4.24e-07!8;UBERON:0007245!4.24e-07!8;UBERON:0010009!4.24e-07!8;UBERON:0010011!4.24e-07!8;UBERON:0000454!4.24e-07!8;UBERON:0002259!6.32e-07!1;UBERON:0002314!6.32e-07!1;UBERON:0006777!6.32e-07!1;UBERON:0005882!6.32e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1655599152625,0,0,0,0,0,0,0,0,2.89900944991207,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p17@Ccdc92}} | ||
|EntrezGene=215707 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=D6RJ58 | |||
|association_with_transcript=-72bp_to_ENSMUST00000135495_5end | |||
|description=CAGE_peak_17_at_Ccdc92_5end | |||
|id=chr5:125342327..125342334,- | |||
|ontology_enrichment_celltype=CL:0002610!7.10e-09!3;CL:0002614!7.76e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002950!1.04e-13!4;UBERON:0001891!1.04e-13!4;UBERON:0009616!1.04e-13!4;UBERON:0002298!2.51e-09!6;UBERON:0004684!7.10e-09!3;UBERON:0002275!7.10e-09!3;UBERON:0002038!7.76e-09!3;UBERON:0002308!7.76e-09!3;UBERON:0009663!7.76e-09!3;UBERON:0009661!7.76e-09!3;UBERON:0006331!7.76e-09!3;UBERON:0000125!7.76e-09!3;UBERON:0002420!4.24e-07!8;UBERON:0007245!4.24e-07!8;UBERON:0010009!4.24e-07!8;UBERON:0010011!4.24e-07!8;UBERON:0000454!4.24e-07!8;UBERON:0002259!6.32e-07!1;UBERON:0002314!6.32e-07!1;UBERON:0006777!6.32e-07!1;UBERON:0005882!6.32e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1655599152625,0,0,0,0,0,0,0,0,2.89900944991207,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p17@Ccdc92 | |||
}} |
Revision as of 06:28, 14 September 2013
Short description: | p17@Ccdc92 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Ccdc92_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -72bp_to_ENSMUST00000135495_5end |
EntrezGene: | Ccdc92 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.41e-12 | 14 |
male reproductive organ | 2.49e-11 | 15 |
male organism | 1.13e-10 | 16 |
male reproductive system | 1.13e-10 | 16 |
external genitalia | 4.31e-10 | 17 |
indifferent external genitalia | 4.31e-10 | 17 |
indifferent gonad | 4.31e-10 | 17 |
gonad | 1.42e-09 | 18 |
gonad primordium | 1.42e-09 | 18 |
reproductive organ | 2.29e-07 | 24 |
raphe nuclei | 5.46e-07 | 3 |
reticular formation | 5.46e-07 | 3 |
reproductive structure | 7.46e-07 | 26 |
reproductive system | 7.46e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.