FFCP PHASE1:Mm9::chr5:36006234..36006252,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=749|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:36006234..36006252,-|id=chr5:36006234..36006252,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.68e-11!24;UBERON:0005156!1.83e-11!26;UBERON:0000990!1.83e-11!26;UBERON:0004176!2.71e-09!17;UBERON:0009196!2.71e-09!17;UBERON:0009117!2.71e-09!17;UBERON:0003100!4.92e-09!11;UBERON:0000991!2.03e-08!18;UBERON:0005564!2.03e-08!18;UBERON:0003102!3.95e-08!23;UBERON:0000473!5.24e-08!14;UBERON:0000474!1.03e-07!9;UBERON:0003135!3.93e-07!15;UBERON:0000464!6.67e-07!57;UBERON:0003134!7.27e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.19e-27,11;UBERON:0000474,1.19e-25,9;UBERON:0003975,1.74e-24,5;UBERON:0003134,2.83e-21,8;UBERON:0005795,2.86e-20,4;UBERON:0000995,2.86e-20,4;UBERON:0005156,5.28e-17,26;UBERON:0000990,5.28e-17,26;UBERON:0003133,6.66e-15,24;UBERON:0004175,1.48e-13,9;UBERON:0001987,4.77e-11,2;UBERON:0003124,4.77e-11,2;UBERON:0004340,4.77e-11,2;UBERON:0007023,6.59e-08,51;UBERON:0005631,1.22e-07,3;UBERON:0000478,1.22e-07,3;UBERON:0000158,1.22e-07,3;UBERON:0000162,4.17e-07,3;UBERON:0001353,4.17e-07,3;UBERON:0000163,4.17e-07,3;UBERON:0006866,4.17e-07,3;UBERON:0001046,4.17e-07,3;UBERON:0000164,4.17e-07,3;UBERON:0000931,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.247194967734374,1.01219549843938,0.884610551949874,0.970601099684455,0.441683036920787,0.484875253135222,0,0.585561594023094,0,0,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0.712875546952214,0.373220911830279,0,0.210441855886474,0,0,0,0.60281927134286,0.612328492361951,0.896796041993948,0.187403449119458,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.583826711835847,0.329119699826961,0.985004784474571,1.37816976227955,1.16959989940266,0.439100230582101,0.939444931322602,0,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.505892296994058,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,1.17080188714679,0.630540576424764,0.221464689648775,0.318909537314974,0,0.690739927463582,0.867894351489069,0,0,1.47529281905711,0.551873492609465,0,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0.651547837414304,1.48473110675282,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,7.74416636610244,1.48282449604674,0,0.8244312647074,0.484393280087717,0.422190474497091,0.358117032009409,0.820704498725306,0,0.370850604021019,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.432021363287205,0,0.87345025498471,0.404593039154462,0.661227645802687,0,0.259229946583586,0.621339313086926,0.56369293868419,0,0.330916980914195,0.777804753376191,0.904118764344118,1.520605129417,0.938857909166032,1.3020438484395,0.838874755405687,0.483168241652012,1.15212002503146,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,1.35232715822533,6.75656911624255,1.46521299413812,1.2862102744744,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0,0,0.191288332068843,0.441182838239031,0.695603506861264|short_description=p@chr5:36006234..36006252,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=749 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:36006234..36006252,- | |||
|id=chr5:36006234..36006252,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.68e-11!24;UBERON:0005156!1.83e-11!26;UBERON:0000990!1.83e-11!26;UBERON:0004176!2.71e-09!17;UBERON:0009196!2.71e-09!17;UBERON:0009117!2.71e-09!17;UBERON:0003100!4.92e-09!11;UBERON:0000991!2.03e-08!18;UBERON:0005564!2.03e-08!18;UBERON:0003102!3.95e-08!23;UBERON:0000473!5.24e-08!14;UBERON:0000474!1.03e-07!9;UBERON:0003135!3.93e-07!15;UBERON:0000464!6.67e-07!57;UBERON:0003134!7.27e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.19e-27,11;UBERON:0000474,1.19e-25,9;UBERON:0003975,1.74e-24,5;UBERON:0003134,2.83e-21,8;UBERON:0005795,2.86e-20,4;UBERON:0000995,2.86e-20,4;UBERON:0005156,5.28e-17,26;UBERON:0000990,5.28e-17,26;UBERON:0003133,6.66e-15,24;UBERON:0004175,1.48e-13,9;UBERON:0001987,4.77e-11,2;UBERON:0003124,4.77e-11,2;UBERON:0004340,4.77e-11,2;UBERON:0007023,6.59e-08,51;UBERON:0005631,1.22e-07,3;UBERON:0000478,1.22e-07,3;UBERON:0000158,1.22e-07,3;UBERON:0000162,4.17e-07,3;UBERON:0001353,4.17e-07,3;UBERON:0000163,4.17e-07,3;UBERON:0006866,4.17e-07,3;UBERON:0001046,4.17e-07,3;UBERON:0000164,4.17e-07,3;UBERON:0000931,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.247194967734374,1.01219549843938,0.884610551949874,0.970601099684455,0.441683036920787,0.484875253135222,0,0.585561594023094,0,0,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0.712875546952214,0.373220911830279,0,0.210441855886474,0,0,0,0.60281927134286,0.612328492361951,0.896796041993948,0.187403449119458,1.29351685369508,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.583826711835847,0.329119699826961,0.985004784474571,1.37816976227955,1.16959989940266,0.439100230582101,0.939444931322602,0,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.505892296994058,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.714130922658041,1.17080188714679,0.630540576424764,0.221464689648775,0.318909537314974,0,0.690739927463582,0.867894351489069,0,0,1.47529281905711,0.551873492609465,0,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0.651547837414304,1.48473110675282,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,7.74416636610244,1.48282449604674,0,0.8244312647074,0.484393280087717,0.422190474497091,0.358117032009409,0.820704498725306,0,0.370850604021019,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.432021363287205,0,0.87345025498471,0.404593039154462,0.661227645802687,0,0.259229946583586,0.621339313086926,0.56369293868419,0,0.330916980914195,0.777804753376191,0.904118764344118,1.520605129417,0.938857909166032,1.3020438484395,0.838874755405687,0.483168241652012,1.15212002503146,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,1.35232715822533,6.75656911624255,1.46521299413812,1.2862102744744,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0,0,0.191288332068843,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr5:36006234..36006252,- | |||
}} |
Revision as of 07:33, 14 September 2013
Short description: | p@chr5:36006234..36006252, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:36006234..36006252, - |
Coexpression cluster: | MCL_coexpression_mm9:749 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female organism | 3.19e-27 | 11 |
female reproductive system | 1.19e-25 | 9 |
internal female genitalia | 1.74e-24 | 5 |
female reproductive organ | 2.83e-21 | 8 |
embryonic uterus | 2.86e-20 | 4 |
uterus | 2.86e-20 | 4 |
reproductive structure | 5.28e-17 | 26 |
reproductive system | 5.28e-17 | 26 |
reproductive organ | 6.66e-15 | 24 |
internal genitalia | 1.48e-13 | 9 |
placenta | 4.77e-11 | 2 |
chorion | 4.77e-11 | 2 |
allantois | 4.77e-11 | 2 |
adult organism | 6.59e-08 | 51 |
extraembryonic membrane | 1.22e-07 | 3 |
extraembryonic structure | 1.22e-07 | 3 |
membranous layer | 1.22e-07 | 3 |
cloaca | 4.17e-07 | 3 |
anal region | 4.17e-07 | 3 |
embryonic cloaca | 4.17e-07 | 3 |
terminal part of digestive tract | 4.17e-07 | 3 |
hindgut | 4.17e-07 | 3 |
primitive urogenital sinus | 4.17e-07 | 3 |
proctodeum | 4.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.