FFCP PHASE1:Mm9::chr5:66542601..66542614,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245945|HGNC=|MCL_coexpression_id=143|UniProt=|association_with_transcript=-39bp_to_ENSMUST00000131838_5end|description=CAGE_peak_10_at_Rbm47_5end|id=chr5:66542601..66542614,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.41e-11,3;CL:0000351,1.41e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.92e-10!66;UBERON:0005172!1.92e-09!49;UBERON:0005173!1.92e-09!49;UBERON:0002417!1.92e-09!49;UBERON:0000916!1.92e-09!49;UBERON:0005177!8.86e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.41e-11,3;UBERON:0000307,1.41e-11,3;UBERON:0007010,1.41e-11,3|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.869593466105033,1.72084775396277,1.3599426674155,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,1.01343946190039,0,0.45673551887624,0.258937883647172,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.904335843315735,1.05829836422134,0.376999773989026,0.741584903203122,0.144599356919912,0,0,0,0,0,0.585561594023094,1.04723353406728,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,1.26361379216837,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,1.98251269790279,1.05780226665418,0,0,0.128867461322093,1.21010114774006,0.22237804384487,0.570676878337677,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0.49095073923223,1.45444035385792,1.03327103585722,1.41298855057237,0.863780147452604,1.1858105083486,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0.896987067609561,0.964887042726734,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.780534591431195,0,0.44292937929755,0.318909537314974,0,0.518054945597687,0.433947175744535,1.50791283939272,0,2.95058563811422,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,2.1183207086382,0,0.49465875882444,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,1.24267862617385,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.596044064343795,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,10.6553257619551,26.3758738431859,3.35769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.715308569841963,0.436039249896986,0.188218760830661,0.0846146078916765,0,1.05227884575137,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p10@Rbm47}} | ||
|EntrezGene=245945 | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_ENSMUST00000131838_5end | |||
|description=CAGE_peak_10_at_Rbm47_5end | |||
|id=chr5:66542601..66542614,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.41e-11,3;CL:0000351,1.41e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!3.92e-10!66;UBERON:0005172!1.92e-09!49;UBERON:0005173!1.92e-09!49;UBERON:0002417!1.92e-09!49;UBERON:0000916!1.92e-09!49;UBERON:0005177!8.86e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.41e-11,3;UBERON:0000307,1.41e-11,3;UBERON:0007010,1.41e-11,3 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.425216450755349,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.869593466105033,1.72084775396277,1.3599426674155,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,1.01343946190039,0,0.45673551887624,0.258937883647172,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.904335843315735,1.05829836422134,0.376999773989026,0.741584903203122,0.144599356919912,0,0,0,0,0,0.585561594023094,1.04723353406728,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,1.26361379216837,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,1.98251269790279,1.05780226665418,0,0,0.128867461322093,1.21010114774006,0.22237804384487,0.570676878337677,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0.49095073923223,1.45444035385792,1.03327103585722,1.41298855057237,0.863780147452604,1.1858105083486,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0.896987067609561,0.964887042726734,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.780534591431195,0,0.44292937929755,0.318909537314974,0,0.518054945597687,0.433947175744535,1.50791283939272,0,2.95058563811422,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,2.1183207086382,0,0.49465875882444,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,1.24267862617385,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.596044064343795,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,10.6553257619551,26.3758738431859,3.35769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.715308569841963,0.436039249896986,0.188218760830661,0.0846146078916765,0,1.05227884575137,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p10@Rbm47 | |||
}} |
Revision as of 07:53, 14 September 2013
Short description: | p10@Rbm47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Rbm47_5end |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | -39bp_to_ENSMUST00000131838_5end |
EntrezGene: | Rbm47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.41e-11 | 3 |
trophoblast cell | 1.41e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.41e-11 | 3 |
blastula | 1.41e-11 | 3 |
cleaving embryo | 1.41e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.