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FFCP PHASE1:Mm9::chr5:93326982..93327000,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27428|HGNC=|MCL_coexpression_id=2433|UniProt=Q9QXN0|association_with_transcript=-18bp_to_ENSMUST00000113051_5end|description=CAGE_peak_6_at_Shroom3_5end|id=chr5:93326982..93327000,+|ontology_enrichment_celltype=CL:0002563!2.44e-07!9;CL:0002251!2.44e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-11,9;CL:0002251,3.10e-11,9;CL:0000239,5.32e-08,6;CL:0000677,5.32e-08,6;CL:0000584,5.32e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.05e-17!59;UBERON:0000160!2.25e-13!43;UBERON:0000344!1.59e-10!15;UBERON:0001242!1.34e-09!13;UBERON:0000060!1.34e-09!13;UBERON:0001262!1.34e-09!13;UBERON:0004786!1.34e-09!13;UBERON:0004923!1.45e-08!24;UBERON:0003350!2.44e-07!9;UBERON:0004808!2.44e-07!9;UBERON:0001277!2.44e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.20e-32,47;UBERON:0000160,8.30e-32,31;UBERON:0000344,1.49e-16,15;UBERON:0001242,5.22e-15,13;UBERON:0001262,5.22e-15,13;UBERON:0004786,5.22e-15,13;UBERON:0003350,3.10e-11,9;UBERON:0004808,3.10e-11,9;UBERON:0001277,3.10e-11,9;UBERON:0004923,3.76e-11,24;UBERON:0000485,1.12e-08,11;UBERON:0001007,1.39e-07,116;UBERON:0001555,1.39e-07,116;UBERON:0007026,1.39e-07,116;UBERON:0004119,3.00e-07,118;UBERON:0000925,3.00e-07,118;UBERON:0006595,3.00e-07,118;UBERON:0004921,9.66e-07,114|phase1_expression=0,4.88565570695105,8.18998630901165,9.37639055051173,9.5170188689806,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.3998863419011,2.06468352960453,5.16808767703518,4.30761996159075,3.01659725760245,2.47030445293286,2.77233142735924,2.43903561720835,0,0,0,4.62162591602039,6.31691652362271,4.90006455029686,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,0.872100625521786,1.97717564461025,0.777719596297134,0.699932108126813,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,2.09720077362883,3.07374644257244,0.311068836925433,0.270011876663381,0.210324961351382,0,0,0.489963196859816,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,1.05509030184155,0.640413505216868,0,0,0,0,0,0.427115042397309,0.186399445825301,10.0715837133135,4.45872204630035,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,0.445326417194474,0.346970653532272,0.304465478312141,0,0,0.352766121407114,0.251333182659351,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0,7.40825460104915,0,0,0,0,0,0.251308704225729,0,0,0,0,0.509196819251581,0,0,0.631325567659422,0.780722657776222,0,0.360124259610698,0,1.29269348387523,0.640568601424249,0.937017245597288,2.32833033665114,0.431135985865684,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0.205782136407943,1.59227413454795,0,0,0,2.27838349789052,1.40715635988658,2.70093092191522,1.42046841351126,1.77087808572663,1.69693824176116,1.86027155800326,1.87791380979733,1.75148013550754,1.97471819896177,0.164167464079095,0.56748166682099,0.146199987425332,0.219550115291051,0.268412837520744,0,0.205809224758569,13.8775888853195,1.58670339998127,1.70630600428187,1.39342003116263,1.03093969057675,2.42020229548011,1.55664630691409,3.23383564391351,6.16887780007865,4.44687177754829,5.7807098024062,5.96869416123452,4.874102177978,5.39291645192533,3.24207074812041,4.58024928485045,1.89667900953082,1.94222471436539,2.25415471346161,2.44381593414377,1.35766741017338,1.54298803758701,0.0632365371242573,0,0,0,0.296452627087149,0,0.393117990226406,0,0,0,0.50925170356284,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0.757965647081939,0.814824882210129,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,1.32878813789265,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,1.10374698521893,0,0.234423373184406,0,0,1.26203287766503,1.56175497718655,0.215423397732799,1.19484398976276,0.891194696329576,1.13230612315533,1.21443210502468,0.584511715822624,1.58115111178609,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.720244376125241,0.646793418913773,0.428674070063185,0.532020700926821,1.07021290561242,0.493647061806363,0.304464949114599,0,0.21183207086382,1.7642271844397,0.16488625294148,0.322928853391811,0.120625849856312,0.596861720015682,0.328281799490123,4.66369338607761,0,0.512612642393558,2.06386867963222,0.555583582109135,0.376736914009382,0.410082683163076,0,0,0,0.138199973804424,2.86401185404534,1.26534397432454,1.01659733563424,1.62008011232702,0.836353184057875,1.09181281873089,1.48350781023303,2.0663363931334,2.35580347785627,5.57344385154709,0,0,1.64468200648377,1.15820943319968,1.55560950675238,0.774958940866387,1.18269287843545,0.234714477291508,0.2604087696879,0.314578033277133,0,0,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.830298780673413,0,1.02440163452481,0.243106717068294,0.838452650511929,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.861532034334199,0,0.231768651889711,0.77163688185482,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.182927972872773,0,0,0,0.711810108745045,0.689531376628944,1.22769312950907,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,1.07435527024149,0,0.220591419119515,0|short_description=p6@Shroom3}}
|EntrezGene=27428
|HGNC=
|MCL_coexpression_id=2433
|UniProt=Q9QXN0
|association_with_transcript=-18bp_to_ENSMUST00000113051_5end
|description=CAGE_peak_6_at_Shroom3_5end
|id=chr5:93326982..93327000,+
|ontology_enrichment_celltype=CL:0002563!2.44e-07!9;CL:0002251!2.44e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-11,9;CL:0002251,3.10e-11,9;CL:0000239,5.32e-08,6;CL:0000677,5.32e-08,6;CL:0000584,5.32e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!3.05e-17!59;UBERON:0000160!2.25e-13!43;UBERON:0000344!1.59e-10!15;UBERON:0001242!1.34e-09!13;UBERON:0000060!1.34e-09!13;UBERON:0001262!1.34e-09!13;UBERON:0004786!1.34e-09!13;UBERON:0004923!1.45e-08!24;UBERON:0003350!2.44e-07!9;UBERON:0004808!2.44e-07!9;UBERON:0001277!2.44e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.20e-32,47;UBERON:0000160,8.30e-32,31;UBERON:0000344,1.49e-16,15;UBERON:0001242,5.22e-15,13;UBERON:0001262,5.22e-15,13;UBERON:0004786,5.22e-15,13;UBERON:0003350,3.10e-11,9;UBERON:0004808,3.10e-11,9;UBERON:0001277,3.10e-11,9;UBERON:0004923,3.76e-11,24;UBERON:0000485,1.12e-08,11;UBERON:0001007,1.39e-07,116;UBERON:0001555,1.39e-07,116;UBERON:0007026,1.39e-07,116;UBERON:0004119,3.00e-07,118;UBERON:0000925,3.00e-07,118;UBERON:0006595,3.00e-07,118;UBERON:0004921,9.66e-07,114
|phase1_expression=0,4.88565570695105,8.18998630901165,9.37639055051173,9.5170188689806,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,2.3998863419011,2.06468352960453,5.16808767703518,4.30761996159075,3.01659725760245,2.47030445293286,2.77233142735924,2.43903561720835,0,0,0,4.62162591602039,6.31691652362271,4.90006455029686,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,0.872100625521786,1.97717564461025,0.777719596297134,0.699932108126813,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,2.09720077362883,3.07374644257244,0.311068836925433,0.270011876663381,0.210324961351382,0,0,0.489963196859816,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,1.05509030184155,0.640413505216868,0,0,0,0,0,0.427115042397309,0.186399445825301,10.0715837133135,4.45872204630035,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,0.445326417194474,0.346970653532272,0.304465478312141,0,0,0.352766121407114,0.251333182659351,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0,7.40825460104915,0,0,0,0,0,0.251308704225729,0,0,0,0,0.509196819251581,0,0,0.631325567659422,0.780722657776222,0,0.360124259610698,0,1.29269348387523,0.640568601424249,0.937017245597288,2.32833033665114,0.431135985865684,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0.205782136407943,1.59227413454795,0,0,0,2.27838349789052,1.40715635988658,2.70093092191522,1.42046841351126,1.77087808572663,1.69693824176116,1.86027155800326,1.87791380979733,1.75148013550754,1.97471819896177,0.164167464079095,0.56748166682099,0.146199987425332,0.219550115291051,0.268412837520744,0,0.205809224758569,13.8775888853195,1.58670339998127,1.70630600428187,1.39342003116263,1.03093969057675,2.42020229548011,1.55664630691409,3.23383564391351,6.16887780007865,4.44687177754829,5.7807098024062,5.96869416123452,4.874102177978,5.39291645192533,3.24207074812041,4.58024928485045,1.89667900953082,1.94222471436539,2.25415471346161,2.44381593414377,1.35766741017338,1.54298803758701,0.0632365371242573,0,0,0,0.296452627087149,0,0.393117990226406,0,0,0,0.50925170356284,0.287696137450811,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0.757965647081939,0.814824882210129,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0.157635144106191,1.32878813789265,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,1.10374698521893,0,0.234423373184406,0,0,1.26203287766503,1.56175497718655,0.215423397732799,1.19484398976276,0.891194696329576,1.13230612315533,1.21443210502468,0.584511715822624,1.58115111178609,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.720244376125241,0.646793418913773,0.428674070063185,0.532020700926821,1.07021290561242,0.493647061806363,0.304464949114599,0,0.21183207086382,1.7642271844397,0.16488625294148,0.322928853391811,0.120625849856312,0.596861720015682,0.328281799490123,4.66369338607761,0,0.512612642393558,2.06386867963222,0.555583582109135,0.376736914009382,0.410082683163076,0,0,0,0.138199973804424,2.86401185404534,1.26534397432454,1.01659733563424,1.62008011232702,0.836353184057875,1.09181281873089,1.48350781023303,2.0663363931334,2.35580347785627,5.57344385154709,0,0,1.64468200648377,1.15820943319968,1.55560950675238,0.774958940866387,1.18269287843545,0.234714477291508,0.2604087696879,0.314578033277133,0,0,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.830298780673413,0,1.02440163452481,0.243106717068294,0.838452650511929,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.861532034334199,0,0.231768651889711,0.77163688185482,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.182927972872773,0,0,0,0.711810108745045,0.689531376628944,1.22769312950907,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,1.07435527024149,0,0.220591419119515,0
|short_description=p6@Shroom3
}}

Revision as of 08:21, 14 September 2013

Short description:p6@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Shroom3_5end
Coexpression cluster:MCL_coexpression_mm9:2433
Association with transcript: -18bp_to_ENSMUST00000113051_5end
EntrezGene:Shroom3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D910.07
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I313.88
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell3.10e-119
epithelial cell of alimentary canal3.10e-119
brush border epithelial cell5.32e-086
gut absorptive cell5.32e-086
enterocyte5.32e-086







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