FFCP PHASE1:Mm9::chr6:145024586..145024608,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=3551|UniProt=P24288,Q3TJN1|association_with_transcript=68bp_to_NM_007532,uc009eqt.2,uc009equ.2_5end|description=CAGE_peak_6_at_Bcat1_5end|id=chr6:145024586..145024608,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!9.11e-07!13;UBERON:0004708!9.11e-07!13;UBERON:0002101!9.11e-07!13;UBERON:0004357!9.11e-07!13;UBERON:0009872!9.11e-07!13;UBERON:0004347!9.11e-07!13;UBERON:0005732!9.11e-07!13;UBERON:0005733!9.11e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000026,4.06e-09,12;UBERON:0004708,4.06e-09,12;UBERON:0002101,4.06e-09,12;UBERON:0004357,4.06e-09,12;UBERON:0004347,4.06e-09,12;UBERON:0005732,4.06e-09,12;UBERON:0005733,4.06e-09,12;UBERON:0002102,1.40e-08,7;UBERON:0004710,1.40e-08,7;UBERON:0005419,1.40e-08,7;UBERON:0005417,1.40e-08,7;UBERON:0005729,1.40e-08,7;UBERON:0010707,3.28e-08,13;UBERON:0003975,6.46e-08,5;UBERON:0000474,1.13e-07,9;UBERON:0010708,2.59e-07,8;UBERON:0005795,9.93e-07,4;UBERON:0000995,9.93e-07,4|phase1_expression=0,0,0,0,0,0,0,0,21.8222519335083,0.70219357896598,26.8812210114043,3.03134204182278,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0.765389611359628,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,1.39986421625363,0,0.167782606057736,0,0,2.82985379639542,1.43266719969378,0,0.404632921719196,0.528990979272033,0,3.04960078862219,7.11435836888911,0.449949858640699,1.97773272513395,0,0.599200221036809,0,0.103689612308478,0.135005938331691,0.630974884054146,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0.883885756421003,0.854230084794618,0.186399445825301,2.19605960666234,0.68014404096107,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0.517875767294343,0.445326417194474,1.73485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,2.22475470960936,0.289198713839823,0.884610551949874,2.42650274921114,1.98757366614354,1.93950101254089,0,0.292780797011547,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0.521472960576829,0.255715457330331,0,0.486723789203273,0.305518091550949,0.622034853050465,0.252722758433675,0,2.34216797332867,2.5289231487682,3.24111833649629,1.9591626318643,1.49680298132921,1.66547836370305,2.34254311399322,0,1.94011193639558,1.89106080167819,1.93546236580344,3.28793598641362,2.50242524303038,3.1342694986995,2.26360350048738,1.19420560091096,0,0,0,0.207125772535502,1.17263029990548,0,1.18372367792605,0,0.154267112887378,0,0.536546802799238,0,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0.213288250535234,0.696710015581316,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,0.685491075658373,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,1.91893192373483,2.04098346193787,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0.863088412352432,0,0,0,0,0,0,0,0,0.184753190166605,1.51593129416388,0.814824882210129,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.481651769963376,0.234423373184406,2.29508923527346,0.252470927204373,0,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0,0,0.321321316421807,8.94222536812092,0.712262414669021,0.81443479676788,14.0224604526655,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,1.05418608574999,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,19.0084083531605,6.99045833850607,0,0.32977250588296,0.322928853391811,1.14594557363496,0.477489376012546,0.820704498725306,0,0.18542530201051,0,0,1.11116716421827,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0.474503990371703,0.609958401380546,1.29606408986162,1.46361807210128,0.87345025498471,0.944050424693745,0.330613822901344,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.352071715937262,0.39061315453185,0,0,0,0.316011120628178,0.405450430580328,0.513554785824136,0.389762468933385,0,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.116876902181569,0,14.2071010159401,26.4655876997953,10.4088462145729,0,33.2197981548592,71.9785883370352,3.42989406526505,0,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0,0,0,2.80225838477277,1.19707462020309,0.682934423016537,1.70174701947806,2.72497111416377,0.919217542250071,0.222246727801615,1.64828045791115,1.28367683836726,1.26348605881899,0.760437899670719,1.5090107310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| ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=3551 | |||
|UniProt=P24288,Q3TJN1 | |||
|association_with_transcript=68bp_to_NM_007532,uc009eqt.2,uc009equ.2_5end | |||
|description=CAGE_peak_6_at_Bcat1_5end | |||
|id=chr6:145024586..145024608,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!9.11e-07!13;UBERON:0004708!9.11e-07!13;UBERON:0002101!9.11e-07!13;UBERON:0004357!9.11e-07!13;UBERON:0009872!9.11e-07!13;UBERON:0004347!9.11e-07!13;UBERON:0005732!9.11e-07!13;UBERON:0005733!9.11e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,4.06e-09,12;UBERON:0004708,4.06e-09,12;UBERON:0002101,4.06e-09,12;UBERON:0004357,4.06e-09,12;UBERON:0004347,4.06e-09,12;UBERON:0005732,4.06e-09,12;UBERON:0005733,4.06e-09,12;UBERON:0002102,1.40e-08,7;UBERON:0004710,1.40e-08,7;UBERON:0005419,1.40e-08,7;UBERON:0005417,1.40e-08,7;UBERON:0005729,1.40e-08,7;UBERON:0010707,3.28e-08,13;UBERON:0003975,6.46e-08,5;UBERON:0000474,1.13e-07,9;UBERON:0010708,2.59e-07,8;UBERON:0005795,9.93e-07,4;UBERON:0000995,9.93e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,21.8222519335083,0.70219357896598,26.8812210114043,3.03134204182278,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0.765389611359628,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,1.39986421625363,0,0.167782606057736,0,0,2.82985379639542,1.43266719969378,0,0.404632921719196,0.528990979272033,0,3.04960078862219,7.11435836888911,0.449949858640699,1.97773272513395,0,0.599200221036809,0,0.103689612308478,0.135005938331691,0.630974884054146,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0.883885756421003,0.854230084794618,0.186399445825301,2.19605960666234,0.68014404096107,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0.517875767294343,0.445326417194474,1.73485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,2.22475470960936,0.289198713839823,0.884610551949874,2.42650274921114,1.98757366614354,1.93950101254089,0,0.292780797011547,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0.521472960576829,0.255715457330331,0,0.486723789203273,0.305518091550949,0.622034853050465,0.252722758433675,0,2.34216797332867,2.5289231487682,3.24111833649629,1.9591626318643,1.49680298132921,1.66547836370305,2.34254311399322,0,1.94011193639558,1.89106080167819,1.93546236580344,3.28793598641362,2.50242524303038,3.1342694986995,2.26360350048738,1.19420560091096,0,0,0,0.207125772535502,1.17263029990548,0,1.18372367792605,0,0.154267112887378,0,0.536546802799238,0,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0.213288250535234,0.696710015581316,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,0.685491075658373,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,1.91893192373483,2.04098346193787,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0.863088412352432,0,0,0,0,0,0,0,0,0.184753190166605,1.51593129416388,0.814824882210129,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.481651769963376,0.234423373184406,2.29508923527346,0.252470927204373,0,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0,0,0.321321316421807,8.94222536812092,0.712262414669021,0.81443479676788,14.0224604526655,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,1.05418608574999,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,19.0084083531605,6.99045833850607,0,0.32977250588296,0.322928853391811,1.14594557363496,0.477489376012546,0.820704498725306,0,0.18542530201051,0,0,1.11116716421827,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.414599921413271,0,0.474503990371703,0.609958401380546,1.29606408986162,1.46361807210128,0.87345025498471,0.944050424693745,0.330613822901344,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0.352071715937262,0.39061315453185,0,0,0,0.316011120628178,0.405450430580328,0.513554785824136,0.389762468933385,0,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.116876902181569,0,14.2071010159401,26.4655876997953,10.4088462145729,0,33.2197981548592,71.9785883370352,3.42989406526505,0,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0,0,0,2.80225838477277,1.19707462020309,0.682934423016537,1.70174701947806,2.72497111416377,0.919217542250071,0.222246727801615,1.64828045791115,1.28367683836726,1.26348605881899,0.760437899670719,1.50901073108861,0.655490552289177,1.02440243847791,0.918967503289812,1.42888107384922,0.695305955669133,1.35036454324594,1.64834360321323,1.61918812147837,1.02860775715625,1.24233064311536,1.90748951957857,1.30811774969096,0.658765662907314,1.09998990259179,1.09756783723664,1.05227884575137,1.35804113845862,1.68342681497322,0.830445126869219,0.689531376628944,0.818462086339379,1.08455788830176,0.385813221962283,0.999242311751784,0.701794825336225,0.644613162144895,1.91288332068843,1.54413993383661,2.08681052058379 | |||
|short_description=p6@Bcat1 | |||
}} |
Revision as of 09:21, 14 September 2013
Short description: | p6@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3551 |
Association with transcript: | 68bp_to_NM_007532, uc009eqt.2, uc009equ.2_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 4.06e-09 | 12 |
paired limb/fin | 4.06e-09 | 12 |
limb | 4.06e-09 | 12 |
paired limb/fin bud | 4.06e-09 | 12 |
limb bud | 4.06e-09 | 12 |
limb/fin field | 4.06e-09 | 12 |
limb field | 4.06e-09 | 12 |
forelimb | 1.40e-08 | 7 |
pectoral appendage | 1.40e-08 | 7 |
pectoral appendage bud | 1.40e-08 | 7 |
forelimb bud | 1.40e-08 | 7 |
forelimb/pectoral fin field | 1.40e-08 | 7 |
appendage girdle complex | 3.28e-08 | 13 |
internal female genitalia | 6.46e-08 | 5 |
female reproductive system | 1.13e-07 | 9 |
pectoral complex | 2.59e-07 | 8 |
embryonic uterus | 9.93e-07 | 4 |
uterus | 9.93e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.