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FFCP PHASE1:Mm9::chr6:4697170..4697184,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20392|HGNC=|UniProt=D3Z572|association_with_transcript=-13bp_to_ENSMUST00000090686_5end|description=CAGE_peak_2_at_Sgce_5end|id=chr6:4697170..4697184,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!6.66e-21!122;UBERON:0000025!1.09e-19!114;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0001049!2.53e-09!52;UBERON:0005068!2.53e-09!52;UBERON:0006241!2.53e-09!52;UBERON:0007135!2.53e-09!52;UBERON:0000477!5.41e-09!154;UBERON:0000955!7.15e-09!50;UBERON:0006238!7.15e-09!50;UBERON:0000033!1.29e-08!63;UBERON:0002616!1.37e-08!49;UBERON:0000073!1.62e-08!75;UBERON:0001016!1.62e-08!75;UBERON:0001017!2.35e-08!73;UBERON:0005743!2.35e-08!73;UBERON:0004121!2.78e-08!102;UBERON:0000924!2.78e-08!102;UBERON:0006601!2.78e-08!102;UBERON:0003080!4.73e-07!40;UBERON:0002780!9.44e-07!39;UBERON:0001890!9.44e-07!39;UBERON:0006240!9.44e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.64e-18,122;UBERON:0000025,6.41e-18,114;UBERON:0010314,1.85e-11,92;UBERON:0000073,2.61e-09,54;UBERON:0001049,4.00e-09,52;UBERON:0005068,4.00e-09,52;UBERON:0006241,4.00e-09,52;UBERON:0007135,4.00e-09,52;UBERON:0001017,2.49e-08,73;UBERON:0001016,2.54e-08,75;UBERON:0000955,3.05e-08,47;UBERON:0006238,3.05e-08,47;UBERON:0002616,6.54e-08,46;UBERON:0002346,7.32e-08,64;UBERON:0003075,7.32e-08,64;UBERON:0007284,7.32e-08,64|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,6.9950082541465,2.9367480345869,0.782391344348039,1.30815093828268,1.31811709640683,2.52758868796568,1.25987779462826,0,0.167782606057736,0,0,1.28629718017973,2.29226751951005,2.06268836910977,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,1.99955689082663,1.76694832761291,0.857435594504678,0.958454710182364,0,0,2.55374676170375,2.91852413186863,0.923204014111357,0.914876436024097,1.04182674111352,1.11673199600552,1.12552522006336,1.83357897332172,1.17851434189467,1.28134512719193,0.372798891650601,0.757261933331841,1.5870027622425,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.983110940922263,5.28333999991979,4.67614808285164,3.5333957451034,0.704217098883403,1.28326477414318,0,0,0,0,0,0.79928715803342,0.517875767294343,1.03909497345377,1.04091196059682,0.913396434936424,2.53677046981664,1.20578112442098,0.587943535678524,1.63366568728578,3.46072954828123,1.44599356919912,0.884610551949874,0.808834249737046,1.10420759230197,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0.11981512450592,0,0.254140454146129,1.79748767285787,3.66000482254901,2.01046963380583,2.25971616249959,2.55715457330331,2.49345653471472,2.10913641988085,1.01839363850316,1.61729061793121,1.0108910337347,0.631325567659422,0.650602214813519,0.229902104433473,0.540186389416048,0.753524089178575,1.2246569847239,1.66547836370305,0.937017245597288,1.29351685369508,0.215567992932842,0.567318240503458,1.40760899331159,0.43839146485515,0.834141747676794,1.0447564995665,0.823128545631774,0.796137067273973,0,0,0,1.03562886267751,0.703578179943289,1.98068267607116,2.13070262026689,1.77087808572663,1.54267112887378,3.0229412817553,1.3413670069981,1.98501082024188,1.31647879930784,1.64167464079095,1.4592385718254,0.584799949701329,0.878200461164203,0.939444931322602,2.3131894342054,0.514523061896422,0,0,0,0,0.128867461322093,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,1.59165177632921,1.16978452271472,2.69645822596266,0.432276099749388,0.398282546508734,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.822074982615345,0.738050739898011,0.784993639206874,0.616985819609003,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0.608580364165509,1.20588579876208,1.52775511068852,1.72617682470486,0.972811360650212,3.56929837144506,2.87536413054709,1.86070473834252,3.74445207737473,1.26289438973556,0.538192240565737,0.964887042726734,3.14080423283228,1.51593129416388,0.651859905768103,0.848725428875941,0.938760993154008,1.50755631697634,0.476087281772027,1.75620283072019,2.83743259391144,3.76489972402917,3.02964060449226,2.29408640602033,2.76295970985433,3.18227928879325,0,0,0,0.827810238914197,2.56880943980467,3.98519734413491,0,0.757412781613119,0.315508219416257,1.56175497718655,1.29254038639679,0.716906393857656,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,1.18586333383957,1.60660658210904,3.26462195979018,1.42452482933804,1.14020871547503,2.8044920905331,0,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,1.84461088766356,0.516856586336442,0.727067458955011,2.49548164869305,1.8962205476149,1.05418608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|EntrezGene=20392
|HGNC=
|UniProt=D3Z572
|association_with_transcript=-13bp_to_ENSMUST00000090686_5end
|description=CAGE_peak_2_at_Sgce_5end
|id=chr6:4697170..4697184,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!6.66e-21!122;UBERON:0000025!1.09e-19!114;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0001049!2.53e-09!52;UBERON:0005068!2.53e-09!52;UBERON:0006241!2.53e-09!52;UBERON:0007135!2.53e-09!52;UBERON:0000477!5.41e-09!154;UBERON:0000955!7.15e-09!50;UBERON:0006238!7.15e-09!50;UBERON:0000033!1.29e-08!63;UBERON:0002616!1.37e-08!49;UBERON:0000073!1.62e-08!75;UBERON:0001016!1.62e-08!75;UBERON:0001017!2.35e-08!73;UBERON:0005743!2.35e-08!73;UBERON:0004121!2.78e-08!102;UBERON:0000924!2.78e-08!102;UBERON:0006601!2.78e-08!102;UBERON:0003080!4.73e-07!40;UBERON:0002780!9.44e-07!39;UBERON:0001890!9.44e-07!39;UBERON:0006240!9.44e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.64e-18,122;UBERON:0000025,6.41e-18,114;UBERON:0010314,1.85e-11,92;UBERON:0000073,2.61e-09,54;UBERON:0001049,4.00e-09,52;UBERON:0005068,4.00e-09,52;UBERON:0006241,4.00e-09,52;UBERON:0007135,4.00e-09,52;UBERON:0001017,2.49e-08,73;UBERON:0001016,2.54e-08,75;UBERON:0000955,3.05e-08,47;UBERON:0006238,3.05e-08,47;UBERON:0002616,6.54e-08,46;UBERON:0002346,7.32e-08,64;UBERON:0003075,7.32e-08,64;UBERON:0007284,7.32e-08,64
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,6.9950082541465,2.9367480345869,0.782391344348039,1.30815093828268,1.31811709640683,2.52758868796568,1.25987779462826,0,0.167782606057736,0,0,1.28629718017973,2.29226751951005,2.06268836910977,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,1.99955689082663,1.76694832761291,0.857435594504678,0.958454710182364,0,0,2.55374676170375,2.91852413186863,0.923204014111357,0.914876436024097,1.04182674111352,1.11673199600552,1.12552522006336,1.83357897332172,1.17851434189467,1.28134512719193,0.372798891650601,0.757261933331841,1.5870027622425,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.983110940922263,5.28333999991979,4.67614808285164,3.5333957451034,0.704217098883403,1.28326477414318,0,0,0,0,0,0.79928715803342,0.517875767294343,1.03909497345377,1.04091196059682,0.913396434936424,2.53677046981664,1.20578112442098,0.587943535678524,1.63366568728578,3.46072954828123,1.44599356919912,0.884610551949874,0.808834249737046,1.10420759230197,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0.11981512450592,0,0.254140454146129,1.79748767285787,3.66000482254901,2.01046963380583,2.25971616249959,2.55715457330331,2.49345653471472,2.10913641988085,1.01839363850316,1.61729061793121,1.0108910337347,0.631325567659422,0.650602214813519,0.229902104433473,0.540186389416048,0.753524089178575,1.2246569847239,1.66547836370305,0.937017245597288,1.29351685369508,0.215567992932842,0.567318240503458,1.40760899331159,0.43839146485515,0.834141747676794,1.0447564995665,0.823128545631774,0.796137067273973,0,0,0,1.03562886267751,0.703578179943289,1.98068267607116,2.13070262026689,1.77087808572663,1.54267112887378,3.0229412817553,1.3413670069981,1.98501082024188,1.31647879930784,1.64167464079095,1.4592385718254,0.584799949701329,0.878200461164203,0.939444931322602,2.3131894342054,0.514523061896422,0,0,0,0,0.128867461322093,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,1.59165177632921,1.16978452271472,2.69645822596266,0.432276099749388,0.398282546508734,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.420814919341911,0.822074982615345,0.738050739898011,0.784993639206874,0.616985819609003,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0.608580364165509,1.20588579876208,1.52775511068852,1.72617682470486,0.972811360650212,3.56929837144506,2.87536413054709,1.86070473834252,3.74445207737473,1.26289438973556,0.538192240565737,0.964887042726734,3.14080423283228,1.51593129416388,0.651859905768103,0.848725428875941,0.938760993154008,1.50755631697634,0.476087281772027,1.75620283072019,2.83743259391144,3.76489972402917,3.02964060449226,2.29408640602033,2.76295970985433,3.18227928879325,0,0,0,0.827810238914197,2.56880943980467,3.98519734413491,0,0.757412781613119,0.315508219416257,1.56175497718655,1.29254038639679,0.716906393857656,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,1.18586333383957,1.60660658210904,3.26462195979018,1.42452482933804,1.14020871547503,2.8044920905331,0,1.21390318077491,1.209294227859,0.943025398779491,0.295301892880773,1.84461088766356,0.516856586336442,0.727067458955011,2.49548164869305,1.8962205476149,1.05418608574999,1.03135543248187,2.7235168460303,0.36012218806262,1.4229455216103,1.28602221018955,1.59606210278046,1.78368817602071,1.15184314421485,1.8267896946876,0.23467170806371,1.0591603543191,0.661585194164886,0.32977250588296,0.807322133479528,0.542816324353403,0.596861720015682,0.164140899745061,0,2.41052892613663,0.170870880797853,0.412773735926445,0.555583582109135,0,0.820165366326151,0.228778173206523,1.35982743995084,0.979660166265606,1.10559979043539,2.86401185404534,0.316335993581135,1.42323626988794,0.86404272657441,0.627264888043406,0.87345025498471,2.42755823492677,1.98368293740806,2.35580347785627,0.388844919875379,1.24267862617385,0.56369293868419,0.448549638131936,0.992750942742586,0.583353565032143,0.904118764344118,0.675824501963113,1.99507305697782,1.17183946359555,0.943734099831398,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.649604114888975,0,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0,0.906921534460845,0.443971906748129,0.448569283047378,0.503653849092235,2.89784391048286,2.064507229963,1.83151624267265,0.857473516316263,1.50471631210609,3.3885110557024,2.76195141904306,2.86447756719698,0.859265911718438,2.74033007908257,1.5107877947794,0.675022500231806,2.70192721934532,1.81256963593682,2.07104124700728,0.415149390336707,0.399024873401031,0.512200817262403,0.729320151204882,0.20961316262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|short_description=p2@Sgce
}}

Revision as of 10:03, 14 September 2013

Short description:p2@Sgce
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sgce_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000090686_5end
EntrezGene:Sgce
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sgce

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit4.64e-18122
tube6.41e-18114
structure with developmental contribution from neural crest1.85e-1192
regional part of nervous system2.61e-0954
neural tube4.00e-0952
neural rod4.00e-0952
future spinal cord4.00e-0952
neural keel4.00e-0952
central nervous system2.49e-0873
nervous system2.54e-0875
brain3.05e-0847
future brain3.05e-0847
regional part of brain6.54e-0846
neurectoderm7.32e-0864
neural plate7.32e-0864
presumptive neural plate7.32e-0864







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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