FFCP PHASE1:Mm9::chr6:82983194..82983205,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:82983194..82983205,-|id=chr6:82983194..82983205,-|ontology_enrichment_celltype=CL:0000333!2.96e-09!10;CL:0000095!2.96e-09!10;CL:0000243!2.96e-09!10;CL:0000123!2.96e-09!10;CL:0000125!2.96e-09!10;CL:0000030!2.96e-09!10;CL:0000339!2.96e-09!10;CL:0002092!3.36e-09!3;CL:0002540!3.36e-09!3;CL:0002453!1.71e-08!8;CL:0000128!9.89e-08!6;CL:0000126!9.89e-08!6;CL:0000127!9.89e-08!6;CL:0000219!1.06e-07!54;CL:0002604!8.43e-07!2;CL:0002605!8.43e-07!2|ontology_enrichment_celltype_v019_2=CL:0002092,6.64e-38,3;CL:0002540,6.64e-38,3;CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0000128,1.37e-19,6;CL:0000126,1.37e-19,6;CL:0000127,1.37e-19,6;CL:0002453,6.82e-15,8;CL:0000333,4.61e-12,10;CL:0000095,4.61e-12,10;CL:0000243,4.61e-12,10;CL:0000123,4.61e-12,10;CL:0000125,4.61e-12,10;CL:0000030,4.61e-12,10;CL:0000339,4.61e-12,10;CL:0000219,1.59e-11,54;CL:0002603,2.03e-07,2;CL:0000708,2.35e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!2.20e-08!5;UBERON:0002472!2.20e-08!5;UBERON:0008784!2.20e-08!5;UBERON:0006058!2.20e-08!5;UBERON:0004709!2.20e-08!5;UBERON:0005420!2.20e-08!5;UBERON:0006057!2.20e-08!5;UBERON:0000978!2.20e-08!5;UBERON:0002103!2.20e-08!5;UBERON:0000376!2.20e-08!5;UBERON:0000154!2.20e-08!5;UBERON:0005730!2.20e-08!5;UBERON:0002204!9.92e-08!32;UBERON:0002529!5.56e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0002371,1.01e-07,16;UBERON:0003210,2.35e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.96222640742402,19.3323840806335,13.9989527333484,0.55994568650145,0,0,0,0,0,0,0.515672092277442,0,0,0,1.0165335962074,0,6.74924787961049,6.92206453796882,7.104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr6:82983194..82983205,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:82983194..82983205,- | |||
|id=chr6:82983194..82983205,- | |||
|ontology_enrichment_celltype=CL:0000333!2.96e-09!10;CL:0000095!2.96e-09!10;CL:0000243!2.96e-09!10;CL:0000123!2.96e-09!10;CL:0000125!2.96e-09!10;CL:0000030!2.96e-09!10;CL:0000339!2.96e-09!10;CL:0002092!3.36e-09!3;CL:0002540!3.36e-09!3;CL:0002453!1.71e-08!8;CL:0000128!9.89e-08!6;CL:0000126!9.89e-08!6;CL:0000127!9.89e-08!6;CL:0000219!1.06e-07!54;CL:0002604!8.43e-07!2;CL:0002605!8.43e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,6.64e-38,3;CL:0002540,6.64e-38,3;CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0000128,1.37e-19,6;CL:0000126,1.37e-19,6;CL:0000127,1.37e-19,6;CL:0002453,6.82e-15,8;CL:0000333,4.61e-12,10;CL:0000095,4.61e-12,10;CL:0000243,4.61e-12,10;CL:0000123,4.61e-12,10;CL:0000125,4.61e-12,10;CL:0000030,4.61e-12,10;CL:0000339,4.61e-12,10;CL:0000219,1.59e-11,54;CL:0002603,2.03e-07,2;CL:0000708,2.35e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!2.20e-08!5;UBERON:0002472!2.20e-08!5;UBERON:0008784!2.20e-08!5;UBERON:0006058!2.20e-08!5;UBERON:0004709!2.20e-08!5;UBERON:0005420!2.20e-08!5;UBERON:0006057!2.20e-08!5;UBERON:0000978!2.20e-08!5;UBERON:0002103!2.20e-08!5;UBERON:0000376!2.20e-08!5;UBERON:0000154!2.20e-08!5;UBERON:0005730!2.20e-08!5;UBERON:0002204!9.92e-08!32;UBERON:0002529!5.56e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0002371,1.01e-07,16;UBERON:0003210,2.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.96222640742402,19.3323840806335,13.9989527333484,0.55994568650145,0,0,0,0,0,0,0.515672092277442,0,0,0,1.0165335962074,0,6.74924787961049,6.92206453796882,7.104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr6:82983194..82983205,- | |||
}} |
Revision as of 10:42, 14 September 2013
Short description: | p@chr6:82983194..82983205, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:82983194..82983205, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 6.64e-38 | 3 |
mesenchymal stem cell of the bone marrow | 6.64e-38 | 3 |
astrocyte of the cerebral cortex | 1.78e-26 | 2 |
astrocyte of the hippocampus | 1.78e-26 | 2 |
oligodendrocyte | 1.37e-19 | 6 |
macroglial cell | 1.37e-19 | 6 |
astrocyte | 1.37e-19 | 6 |
oligodendrocyte precursor cell | 6.82e-15 | 8 |
migratory neural crest cell | 4.61e-12 | 10 |
neuron associated cell | 4.61e-12 | 10 |
glial cell (sensu Vertebrata) | 4.61e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 4.61e-12 | 10 |
glial cell | 4.61e-12 | 10 |
glioblast | 4.61e-12 | 10 |
glioblast (sensu Vertebrata) | 4.61e-12 | 10 |
motile cell | 1.59e-11 | 54 |
astrocyte of the cerebellum | 2.03e-07 | 2 |
leptomeningeal cell | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.72e-08 | 7 |
lobe parts of cerebral cortex | 2.72e-08 | 7 |
hippocampal formation | 2.72e-08 | 7 |
limbic system | 2.72e-08 | 7 |
limbic lobe | 2.72e-08 | 7 |
bone marrow | 1.01e-07 | 16 |
blood-cerebrospinal fluid barrier | 2.35e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.