FFCP PHASE1:Mm9::chr6:86535959..86535964,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=397|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86535959..86535964,-|id=chr6:86535959..86535964,-|ontology_enrichment_celltype=CL:0000239!3.16e-17!6;CL:0000677!3.16e-17!6;CL:0000212!3.16e-17!6;CL:0000584!3.16e-17!6;CL:0002563!3.63e-16!9;CL:0002251!3.63e-16!9;CL:0000066!3.53e-15!25;CL:0000075!9.59e-15!7;CL:0000473!1.81e-13!3;CL:0000627!1.81e-13!3;CL:0000682!1.81e-13!3;CL:0002076!1.69e-09!15;CL:0000223!2.13e-09!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-10,6;CL:0000677,1.07e-10,6;CL:0000584,1.07e-10,6;CL:0000075,2.61e-09,7;CL:0002563,1.89e-07,9;CL:0002251,1.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.34e-21!15;UBERON:0003350!3.63e-16!9;UBERON:0004808!3.63e-16!9;UBERON:0001277!3.63e-16!9;UBERON:0001242!5.61e-15!13;UBERON:0000060!5.61e-15!13;UBERON:0001262!5.61e-15!13;UBERON:0004786!5.61e-15!13;UBERON:0002465!1.12e-13!3;UBERON:0000485!3.87e-13!11;UBERON:0004923!5.45e-13!24;UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000160!6.00e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.73e-30,2;UBERON:0001961,1.73e-30,2;UBERON:0001744,1.73e-30,2;UBERON:0000344,1.13e-24,15;UBERON:0002465,1.01e-20,3;UBERON:0003199,4.83e-16,1;UBERON:0004923,1.23e-15,24;UBERON:0001242,9.78e-11,13;UBERON:0001262,9.78e-11,13;UBERON:0004786,9.78e-11,13;UBERON:0003350,1.89e-07,9;UBERON:0004808,1.89e-07,9;UBERON:0001277,1.89e-07,9|phase1_expression=0,2.79180326111489,5.0049916332849,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,6.19405058881359,0.57423196411502,1.29228598847722,0.861884930743556,0,0,1.10865255327652,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:86535959..86535964,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=397 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:86535959..86535964,- | |||
|id=chr6:86535959..86535964,- | |||
|ontology_enrichment_celltype=CL:0000239!3.16e-17!6;CL:0000677!3.16e-17!6;CL:0000212!3.16e-17!6;CL:0000584!3.16e-17!6;CL:0002563!3.63e-16!9;CL:0002251!3.63e-16!9;CL:0000066!3.53e-15!25;CL:0000075!9.59e-15!7;CL:0000473!1.81e-13!3;CL:0000627!1.81e-13!3;CL:0000682!1.81e-13!3;CL:0002076!1.69e-09!15;CL:0000223!2.13e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-10,6;CL:0000677,1.07e-10,6;CL:0000584,1.07e-10,6;CL:0000075,2.61e-09,7;CL:0002563,1.89e-07,9;CL:0002251,1.89e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.34e-21!15;UBERON:0003350!3.63e-16!9;UBERON:0004808!3.63e-16!9;UBERON:0001277!3.63e-16!9;UBERON:0001242!5.61e-15!13;UBERON:0000060!5.61e-15!13;UBERON:0001262!5.61e-15!13;UBERON:0004786!5.61e-15!13;UBERON:0002465!1.12e-13!3;UBERON:0000485!3.87e-13!11;UBERON:0004923!5.45e-13!24;UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000160!6.00e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.73e-30,2;UBERON:0001961,1.73e-30,2;UBERON:0001744,1.73e-30,2;UBERON:0000344,1.13e-24,15;UBERON:0002465,1.01e-20,3;UBERON:0003199,4.83e-16,1;UBERON:0004923,1.23e-15,24;UBERON:0001242,9.78e-11,13;UBERON:0001262,9.78e-11,13;UBERON:0004786,9.78e-11,13;UBERON:0003350,1.89e-07,9;UBERON:0004808,1.89e-07,9;UBERON:0001277,1.89e-07,9 | |||
|phase1_expression=0,2.79180326111489,5.0049916332849,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,6.19405058881359,0.57423196411502,1.29228598847722,0.861884930743556,0,0,1.10865255327652,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:86535959..86535964,- | |||
}} |
Revision as of 10:50, 14 September 2013
Short description: | p@chr6:86535959..86535964, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86535959..86535964, - |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.07e-10 | 6 |
gut absorptive cell | 1.07e-10 | 6 |
enterocyte | 1.07e-10 | 6 |
columnar/cuboidal epithelial cell | 2.61e-09 | 7 |
intestinal epithelial cell | 1.89e-07 | 9 |
epithelial cell of alimentary canal | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.73e-30 | 2 |
mucosa-associated lymphoid tissue | 1.73e-30 | 2 |
lymphoid tissue | 1.73e-30 | 2 |
mucosa | 1.13e-24 | 15 |
lymphoid system | 1.01e-20 | 3 |
egg chamber | 4.83e-16 | 1 |
organ component layer | 1.23e-15 | 24 |
intestinal mucosa | 9.78e-11 | 13 |
wall of intestine | 9.78e-11 | 13 |
gastrointestinal system mucosa | 9.78e-11 | 13 |
epithelium of mucosa | 1.89e-07 | 9 |
gastrointestinal system epithelium | 1.89e-07 | 9 |
intestinal epithelium | 1.89e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.