FFCP PHASE1:Mm9::chr7:117916296..117916307,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11717|HGNC=|MCL_coexpression_id=56|UniProt=D3YVP7|association_with_transcript=0bp_to_ENSMUST00000106686_5end|description=CAGE_peak_16_at_Ampd3_5end|id=chr7:117916296..117916307,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,5.72e-17,2;CL:0000473,6.79e-11,7;CL:0002194,5.82e-09,4;CL:0000766,5.82e-09,4;CL:0000234,5.82e-09,4;CL:0000576,5.82e-09,4;CL:0000235,5.82e-09,4;CL:0000864,5.82e-09,4;CL:0002009,5.82e-09,4;CL:0000040,5.82e-09,4;CL:0000559,5.82e-09,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003975!1.09e-08!5;UBERON:0005795!1.01e-07!4;UBERON:0000995!1.01e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.08e-25,3;UBERON:0000478,3.08e-25,3;UBERON:0000158,3.08e-25,3;UBERON:0005795,2.70e-19,4;UBERON:0000995,2.70e-19,4;UBERON:0001987,1.55e-17,2;UBERON:0003124,1.55e-17,2;UBERON:0004340,1.55e-17,2;UBERON:0003975,1.42e-15,5;UBERON:0003134,5.80e-10,8;UBERON:0006834,1.19e-09,1;UBERON:0000305,2.09e-09,1;UBERON:0001153,2.52e-09,1;UBERON:0001045,2.52e-09,1;UBERON:0004175,6.44e-09,9;UBERON:0000474,6.44e-09,9;UBERON:0003100,2.16e-07,11|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,1.72269589234506,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,1.71920063963254,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0.502666365318702,1.97755974187499,0.722996784599558,0,0,0.662524555381181,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0,1.50791283939272,3.26343410291226,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6511103096065,2.54198485036584,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,3.75364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,1.39120701372253|short_description=p16@Ampd3}} | ||
|EntrezGene=11717 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=D3YVP7 | |||
|association_with_transcript=0bp_to_ENSMUST00000106686_5end | |||
|description=CAGE_peak_16_at_Ampd3_5end | |||
|id=chr7:117916296..117916307,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,5.72e-17,2;CL:0000473,6.79e-11,7;CL:0002194,5.82e-09,4;CL:0000766,5.82e-09,4;CL:0000234,5.82e-09,4;CL:0000576,5.82e-09,4;CL:0000235,5.82e-09,4;CL:0000864,5.82e-09,4;CL:0002009,5.82e-09,4;CL:0000040,5.82e-09,4;CL:0000559,5.82e-09,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!1.09e-08!5;UBERON:0005795!1.01e-07!4;UBERON:0000995!1.01e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.08e-25,3;UBERON:0000478,3.08e-25,3;UBERON:0000158,3.08e-25,3;UBERON:0005795,2.70e-19,4;UBERON:0000995,2.70e-19,4;UBERON:0001987,1.55e-17,2;UBERON:0003124,1.55e-17,2;UBERON:0004340,1.55e-17,2;UBERON:0003975,1.42e-15,5;UBERON:0003134,5.80e-10,8;UBERON:0006834,1.19e-09,1;UBERON:0000305,2.09e-09,1;UBERON:0001153,2.52e-09,1;UBERON:0001045,2.52e-09,1;UBERON:0004175,6.44e-09,9;UBERON:0000474,6.44e-09,9;UBERON:0003100,2.16e-07,11 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.22940928106717,1.72269589234506,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,1.71920063963254,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0.502666365318702,1.97755974187499,0.722996784599558,0,0,0.662524555381181,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0,1.50791283939272,3.26343410291226,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6511103096065,2.54198485036584,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,3.75364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,1.39120701372253 | |||
|short_description=p16@Ampd3 | |||
}} |
Revision as of 11:28, 14 September 2013
Short description: | p16@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Ampd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000106686_5end |
EntrezGene: | Ampd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 5.72e-17 | 2 |
defensive cell | 6.79e-11 | 7 |
monopoietic cell | 5.82e-09 | 4 |
myeloid leukocyte | 5.82e-09 | 4 |
phagocyte | 5.82e-09 | 4 |
monocyte | 5.82e-09 | 4 |
macrophage | 5.82e-09 | 4 |
tissue-resident macrophage | 5.82e-09 | 4 |
macrophage dendritic cell progenitor | 5.82e-09 | 4 |
monoblast | 5.82e-09 | 4 |
promonocyte | 5.82e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.08e-25 | 3 |
extraembryonic structure | 3.08e-25 | 3 |
membranous layer | 3.08e-25 | 3 |
embryonic uterus | 2.70e-19 | 4 |
uterus | 2.70e-19 | 4 |
placenta | 1.55e-17 | 2 |
chorion | 1.55e-17 | 2 |
allantois | 1.55e-17 | 2 |
internal female genitalia | 1.42e-15 | 5 |
female reproductive organ | 5.80e-10 | 8 |
uterus or analog | 1.19e-09 | 1 |
amnion | 2.09e-09 | 1 |
caecum | 2.52e-09 | 1 |
midgut | 2.52e-09 | 1 |
internal genitalia | 6.44e-09 | 9 |
female reproductive system | 6.44e-09 | 9 |
female organism | 2.16e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.