FFCP PHASE1:Mm9::chr7:126904457..126904477,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20216|HGNC=|MCL_coexpression_id=1216|UniProt=Q3UNX5|association_with_transcript=19bp_to_ENSMUST00000063770,ENSMUST00000106529_5end|description=CAGE_peak_1_at_Acsm3_5end|id=chr7:126904457..126904477,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.98e-14!25;UBERON:0002330!2.98e-14!25;UBERON:0004119!3.08e-14!130;UBERON:0000925!3.08e-14!130;UBERON:0006595!3.08e-14!130;UBERON:0001007!3.53e-14!128;UBERON:0001555!3.53e-14!128;UBERON:0007026!3.53e-14!128;UBERON:0009854!4.75e-14!23;UBERON:0009856!4.75e-14!23;UBERON:0002107!1.85e-13!22;UBERON:0007499!1.85e-13!22;UBERON:0006925!1.85e-13!22;UBERON:0009497!1.85e-13!22;UBERON:0000015!1.85e-13!22;UBERON:0002423!1.85e-13!22;UBERON:0006235!1.85e-13!22;UBERON:0008835!1.85e-13!22;UBERON:0003894!1.85e-13!22;UBERON:0004161!1.85e-13!22;UBERON:0008836!1.85e-13!22;UBERON:0004921!2.44e-13!126;UBERON:0004185!2.44e-13!126;UBERON:0005409!1.80e-12!59;UBERON:0005172!2.65e-11!49;UBERON:0005173!2.65e-11!49;UBERON:0002417!2.65e-11!49;UBERON:0000916!2.65e-11!49;UBERON:0000160!1.44e-10!43;UBERON:0000466!4.71e-10!79;UBERON:0005256!1.14e-08!47;UBERON:0009569!1.84e-08!66;UBERON:0005177!6.44e-08!85|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.92e-15,25;UBERON:0002330,5.92e-15,25;UBERON:0009854,1.05e-14,23;UBERON:0009856,1.05e-14,23;UBERON:0002107,4.70e-14,22;UBERON:0007499,4.70e-14,22;UBERON:0006925,4.70e-14,22;UBERON:0009497,4.70e-14,22;UBERON:0000015,4.70e-14,22;UBERON:0002423,4.70e-14,22;UBERON:0006235,4.70e-14,22;UBERON:0008835,4.70e-14,22;UBERON:0003894,4.70e-14,22;UBERON:0004161,4.70e-14,22;UBERON:0008836,4.70e-14,22;UBERON:0005409,8.44e-12,47;UBERON:0001007,4.40e-11,116;UBERON:0001555,4.40e-11,116;UBERON:0007026,4.40e-11,116;UBERON:0004119,6.88e-11,118;UBERON:0000925,6.88e-11,118;UBERON:0006595,6.88e-11,118;UBERON:0000160,2.52e-10,31;UBERON:0004921,2.71e-10,114;UBERON:0005256,7.71e-10,45;UBERON:0005172,1.19e-09,49;UBERON:0005173,1.19e-09,49;UBERON:0002417,1.19e-09,49;UBERON:0000916,1.19e-09,49;UBERON:0005177,1.78e-07,79;UBERON:0003104,3.40e-07,61;UBERON:0009142,3.40e-07,61|phase1_expression=0,0,1.81999695755814,2.41971369045464,4.50806156951712,3.18970616632591,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,7.51964387129011,7.11168771308227,2.29692785646008,3.4460959692726,2.37018355954478,30.9738173713889,17.1380488236753,5.98672378769323,0,0,0,23.6858328196045,23.4390849955474,25.7253388890585,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,27.8269909153611,68.8339101585109,33.9985666853875,82.574588320586,88.369592772883,132.167931693714,41.4311039388668,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,85.0669903906997,0.517875767294343,13.5082346548991,0.693941307064543,4.56698217468212,3.92046345335299,5.72746034099966,7.2904998424137,12.4409925416379,0.494389935468748,385.935683619244,0,0.161766849947409,1.32504911076236,0.484875253135222,18.6391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0.712875546952214,2.73695335342205,3.0326731012041,9.89076722666428,0,0,0,0.452114453507145,0,0,0,0.776110112217047,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.486412857275134,0.584799949701329,1.3173006917463,2.28150911892632,0,0,1.65209391491899,4.23120906661671,0.639864751605702,4.87697010906921,6.44337306610467,7.26060688644033,9.33987784148455,3.61428689613862,1.89811624617805,2.47048432086016,3.51869292320377,5.37182474511107,4.67913809085888,1.79763881730844,19.0201483889731,21.5072575114717,0,0.228497025219458,1.1270773567308,0.610953983535943,1.16371492300575,0.771494018793504,1.07502113111237,3.24742325555125,5.02395929092399,7.52722699922983,117.988145580685,0.667380422864376,1.17935397067922,3.14806957338795,6.28866376304359,9.88826354984909,18.5876871800436,39.7020669682119,50.9104612073611,38.1640364331433,53.1942364151212,62.1475382606401,63.0316099691412,99.0109201552678,124.143010157163,161.618579656728,2.03228509183265,0,0,0.169745085775188,0,0,0.714130922658041,0.390267295715598,0,0.221464689648775,0.797273843287435,1.3109065177259,1.72684981865896,0.867894351489069,0,0,1.47529281905711,4.96686143348518,0,0,0,8.83648245215305,0,0,0,0,0,0,0,0,0,0,3.40656204499845,2.84904965867608,2.60619134965722,0,1.32745138339963,2.91336763385978,2.11626489875326,3.39489143560617,2.36241514304618,3.68922177532713,1.29214146584111,1.45413491791002,1.42598951353889,3.47640433729398,0,5.15677716240934,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,1.98475558249466,5.7710188529518,1.45317984026315,3.5584625707612,9.31104283224465,11.4898629821543,2.91480836629851,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,33.413471630529,1.73984796469624,10.3692928234693,15.8767851008048,20.2815647134035,29.2605835419878,14.969942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| ||
|EntrezGene=20216 | |||
|HGNC= | |||
|MCL_coexpression_id=1216 | |||
|UniProt=Q3UNX5 | |||
|association_with_transcript=19bp_to_ENSMUST00000063770,ENSMUST00000106529_5end | |||
|description=CAGE_peak_1_at_Acsm3_5end | |||
|id=chr7:126904457..126904477,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.98e-14!25;UBERON:0002330!2.98e-14!25;UBERON:0004119!3.08e-14!130;UBERON:0000925!3.08e-14!130;UBERON:0006595!3.08e-14!130;UBERON:0001007!3.53e-14!128;UBERON:0001555!3.53e-14!128;UBERON:0007026!3.53e-14!128;UBERON:0009854!4.75e-14!23;UBERON:0009856!4.75e-14!23;UBERON:0002107!1.85e-13!22;UBERON:0007499!1.85e-13!22;UBERON:0006925!1.85e-13!22;UBERON:0009497!1.85e-13!22;UBERON:0000015!1.85e-13!22;UBERON:0002423!1.85e-13!22;UBERON:0006235!1.85e-13!22;UBERON:0008835!1.85e-13!22;UBERON:0003894!1.85e-13!22;UBERON:0004161!1.85e-13!22;UBERON:0008836!1.85e-13!22;UBERON:0004921!2.44e-13!126;UBERON:0004185!2.44e-13!126;UBERON:0005409!1.80e-12!59;UBERON:0005172!2.65e-11!49;UBERON:0005173!2.65e-11!49;UBERON:0002417!2.65e-11!49;UBERON:0000916!2.65e-11!49;UBERON:0000160!1.44e-10!43;UBERON:0000466!4.71e-10!79;UBERON:0005256!1.14e-08!47;UBERON:0009569!1.84e-08!66;UBERON:0005177!6.44e-08!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.92e-15,25;UBERON:0002330,5.92e-15,25;UBERON:0009854,1.05e-14,23;UBERON:0009856,1.05e-14,23;UBERON:0002107,4.70e-14,22;UBERON:0007499,4.70e-14,22;UBERON:0006925,4.70e-14,22;UBERON:0009497,4.70e-14,22;UBERON:0000015,4.70e-14,22;UBERON:0002423,4.70e-14,22;UBERON:0006235,4.70e-14,22;UBERON:0008835,4.70e-14,22;UBERON:0003894,4.70e-14,22;UBERON:0004161,4.70e-14,22;UBERON:0008836,4.70e-14,22;UBERON:0005409,8.44e-12,47;UBERON:0001007,4.40e-11,116;UBERON:0001555,4.40e-11,116;UBERON:0007026,4.40e-11,116;UBERON:0004119,6.88e-11,118;UBERON:0000925,6.88e-11,118;UBERON:0006595,6.88e-11,118;UBERON:0000160,2.52e-10,31;UBERON:0004921,2.71e-10,114;UBERON:0005256,7.71e-10,45;UBERON:0005172,1.19e-09,49;UBERON:0005173,1.19e-09,49;UBERON:0002417,1.19e-09,49;UBERON:0000916,1.19e-09,49;UBERON:0005177,1.78e-07,79;UBERON:0003104,3.40e-07,61;UBERON:0009142,3.40e-07,61 | |||
|phase1_expression=0,0,1.81999695755814,2.41971369045464,4.50806156951712,3.18970616632591,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,7.51964387129011,7.11168771308227,2.29692785646008,3.4460959692726,2.37018355954478,30.9738173713889,17.1380488236753,5.98672378769323,0,0,0,23.6858328196045,23.4390849955474,25.7253388890585,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,27.8269909153611,68.8339101585109,33.9985666853875,82.574588320586,88.369592772883,132.167931693714,41.4311039388668,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,85.0669903906997,0.517875767294343,13.5082346548991,0.693941307064543,4.56698217468212,3.92046345335299,5.72746034099966,7.2904998424137,12.4409925416379,0.494389935468748,385.935683619244,0,0.161766849947409,1.32504911076236,0.484875253135222,18.6391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0,0.712875546952214,2.73695335342205,3.0326731012041,9.89076722666428,0,0,0,0.452114453507145,0,0,0,0.776110112217047,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.486412857275134,0.584799949701329,1.3173006917463,2.28150911892632,0,0,1.65209391491899,4.23120906661671,0.639864751605702,4.87697010906921,6.44337306610467,7.26060688644033,9.33987784148455,3.61428689613862,1.89811624617805,2.47048432086016,3.51869292320377,5.37182474511107,4.67913809085888,1.79763881730844,19.0201483889731,21.5072575114717,0,0.228497025219458,1.1270773567308,0.610953983535943,1.16371492300575,0.771494018793504,1.07502113111237,3.24742325555125,5.02395929092399,7.52722699922983,117.988145580685,0.667380422864376,1.17935397067922,3.14806957338795,6.28866376304359,9.88826354984909,18.5876871800436,39.7020669682119,50.9104612073611,38.1640364331433,53.1942364151212,62.1475382606401,63.0316099691412,99.0109201552678,124.143010157163,161.618579656728,2.03228509183265,0,0,0.169745085775188,0,0,0.714130922658041,0.390267295715598,0,0.221464689648775,0.797273843287435,1.3109065177259,1.72684981865896,0.867894351489069,0,0,1.47529281905711,4.96686143348518,0,0,0,8.83648245215305,0,0,0,0,0,0,0,0,0,0,3.40656204499845,2.84904965867608,2.60619134965722,0,1.32745138339963,2.91336763385978,2.11626489875326,3.39489143560617,2.36241514304618,3.68922177532713,1.29214146584111,1.45413491791002,1.42598951353889,3.47640433729398,0,5.15677716240934,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,1.98475558249466,5.7710188529518,1.45317984026315,3.5584625707612,9.31104283224465,11.4898629821543,2.91480836629851,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,33.413471630529,1.73984796469624,10.3692928234693,15.8767851008048,20.2815647134035,29.2605835419878,14.9699424487151,14.8776220305605,14.9200886930897,10.3691978633434,25.474911836564,1.12738587736838,2.99033092087958,1.65458490457098,1.75006069509643,1.6790777052105,1.18269287843545,2.46450201156083,3.1249052362548,0.838874755405687,0.483168241652012,3.16833006883652,1.89606672376907,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0.292373642219257,0.192423683280659,0.350630706544707,0,0,0,0,10.2390484837061,0.93841237725591,1.28206136987086,2.14368379079066,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.682934423016537,1.70174701947806,2.93458427679175,3.49302666055027,3.55594764482584,3.5025959730612,5.45562656306086,3.53776096469316,4.05566879824384,3.58390048633545,3.183811253976,3.3293079250532,2.75690250986944,3.33405583898152,2.0859178670074,3.27945674788299,2.06042950401653,3.97437084362873,4.11443102862498,2.8396128985494,3.33810665926249,3.19762116591123,3.48204707536723,2.5384382367503,4.20734337607377,4.99832451731901,2.98769050460896,6.73370725989286,1.89816028998679,2.46261205938909,3.6830793885272,2.94379998253335,3.47231899766054,0,6.55008503647143,8.80971321598023,1.14772999241306,2.42650561031467,0.463735671240843 | |||
|short_description=p1@Acsm3 | |||
}} |
Revision as of 11:37, 14 September 2013
Short description: | p1@Acsm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acsm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1216 |
Association with transcript: | 19bp_to_ENSMUST00000063770, ENSMUST00000106529_5end |
EntrezGene: | Acsm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.92e-15 | 25 |
exocrine system | 5.92e-15 | 25 |
digestive tract diverticulum | 1.05e-14 | 23 |
sac | 1.05e-14 | 23 |
liver | 4.70e-14 | 22 |
epithelial sac | 4.70e-14 | 22 |
digestive gland | 4.70e-14 | 22 |
epithelium of foregut-midgut junction | 4.70e-14 | 22 |
anatomical boundary | 4.70e-14 | 22 |
hepatobiliary system | 4.70e-14 | 22 |
foregut-midgut junction | 4.70e-14 | 22 |
hepatic diverticulum | 4.70e-14 | 22 |
liver primordium | 4.70e-14 | 22 |
septum transversum | 4.70e-14 | 22 |
liver bud | 4.70e-14 | 22 |
gastrointestinal system | 8.44e-12 | 47 |
digestive system | 4.40e-11 | 116 |
digestive tract | 4.40e-11 | 116 |
primitive gut | 4.40e-11 | 116 |
endoderm-derived structure | 6.88e-11 | 118 |
endoderm | 6.88e-11 | 118 |
presumptive endoderm | 6.88e-11 | 118 |
intestine | 2.52e-10 | 31 |
subdivision of digestive tract | 2.71e-10 | 114 |
trunk mesenchyme | 7.71e-10 | 45 |
abdomen element | 1.19e-09 | 49 |
abdominal segment element | 1.19e-09 | 49 |
abdominal segment of trunk | 1.19e-09 | 49 |
abdomen | 1.19e-09 | 49 |
trunk region element | 1.78e-07 | 79 |
mesenchyme | 3.40e-07 | 61 |
entire embryonic mesenchyme | 3.40e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.