FFCP PHASE1:Mm9::chr7:133343911..133343922,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74204|HGNC=|UniProt=Q924Z6|association_with_transcript=0bp_to_ENSMUST00000009344,NM_028816,uc009jqr.1,uc009jqs.1,uc009jqu.1_5end|description=CAGE_peak_4_at_Xpo6_5end|id=chr7:133343911..133343922,-|ontology_enrichment_celltype=CL:0000540!9.00e-07!33;CL:0000047!9.00e-07!33;CL:0000031!9.00e-07!33;CL:0000404!9.00e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,7.50e-07,33;CL:0000047,7.50e-07,33;CL:0000031,7.50e-07,33;CL:0000404,7.50e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.52e-08!94;UBERON:0001017!3.55e-08!73;UBERON:0005743!3.55e-08!73;UBERON:0007811!6.39e-08!86;UBERON:0000073!7.47e-08!75;UBERON:0001016!7.47e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.52e-08,73;UBERON:0001016,3.26e-07,75;UBERON:0002020,6.31e-07,34|phase1_expression=1.44133962394315,1.39590163055744,0,0.30246421130683,0.500895729946347,0.503637815735669,1.40167584357315,2.1950964985068,6.05391505252167,5.61754863172784,1.02730780935303,0.638177271962691,1.19840510951844,1.31130603628496,0.999329285446988,0.809901069559304,0,1.41957974411207,0.822686601634433,0.84877930359606,1.02051948181284,1.88652807281682,1.56719873483361,0.159992422793407,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,1.84519436275371,0,0.577703239502549,0.166234645358492,0,3.76678467663217,0.7813353445238,2.61761871986899,9.99993529652724,9.56263678941824,2.42755176515577,0.881277725829041,0.709638518536602,1.28482726513177,0.782391344348039,1.74420125104357,2.41654801007919,1.74986909166855,0.419959264876088,1.43752564364972,2.01339127269284,3.62681071005672,3.02484419228218,0.257259436035947,1.43266719969378,0,1.82084814773638,4.7609188134483,1.90149421051854,2.37191172448392,0.889294796111139,0,0,1.4209602298922,0.299600110518405,1.15265491596466,1.34796496001021,2.16009501330705,1.05162480675691,3.42781181284564,3.53389665522582,1.46988959057945,1.43768206527355,0.919218786610021,1.10115880999389,1.27687338085188,0.921639199537461,2.37395317914349,2.01272815925301,2.6045668527838,2.51264699101243,0,1.22238598221448,3.53554302568401,2.56269025438385,1.4911955666024,0.984440513331393,0.529000920747499,0.579728977403356,0,2.03991400112325,0.539703191637817,0,0.896053774194671,0.702222100658759,0.681721290312231,0,0.70667914902068,1.97180787687353,2.56652954828636,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,0,0.34255163915718,0.776813650941515,0.29688427812965,1.04091196059682,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.376999773989026,0.494389935468748,0.433798070759735,0,0.970601099684455,0.883366073841574,0.484875253135222,1.86391761218122,1.17112318804619,2.09446706813455,1.02182822083437,0.958520996047362,0,1.52484272487678,1.3481157546434,1.37250180845588,1.00523481690292,1.39059456153821,1.27857728665165,1.0389402227978,0.811206315338788,0.712875546952214,1.11966273549084,0.252722758433675,0.210441855886474,1.56144531555244,2.29902104433473,1.26043490863744,0.90422890701429,0.816437989815934,0.512454881139399,2.06143794031403,1.55222022443409,2.58681591519411,2.64748512234947,1.58356011747554,1.53437012699302,0.278047249225598,0.696504333044333,0.823128545631774,0.59710280045548,0.702213187313235,1.54408744268829,0.852490498186778,1.24275463521301,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.771335564436891,1.39520366850245,1.07309360559848,0.467061369468678,0.493679549740441,0.32833492815819,0.810688095458557,0.877199924551994,0.219550115291051,0.134206418760372,1.05144974282064,3.19004298375782,0,0.264450566663544,0.426576501070468,2.32236671860439,0.515469845288373,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.13800740571849,1.25673363870702,0,1.83286195060783,0.581857461502877,0.841629838683823,0.822074982615345,0.590440591918409,0.627994911365499,0.370191491765402,0.889357881261447,1.33476084572875,1.96558995113203,0.224862112384854,0.811440485554012,1.20588579876208,1.01850340712568,0.287696137450811,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0,0.252578877947112,0.358794827043824,0.964887042726734,0.369506380333209,1.51593129416388,1.62964976442026,1.52770577197669,0.469380496577004,0.837531287209079,0,0.975668239288994,1.57635144106191,0.8858587585951,1.43509291791738,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.642202359951168,0.937693492737625,1.3114795630134,0.252470927204373,1.26203287766503,0.390438744296638,1.72338718186239,1.19484398976276,0.891194696329576,1.69845918473299,2.42886421004937,0.876767573733936,1.58115111178609,1.92792789853084,0.851640511249612,0.712262414669021,0.651547837414304,1.48473110675282,0,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.72706745895501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| ||
|EntrezGene=74204 | |||
|HGNC= | |||
|UniProt=Q924Z6 | |||
|association_with_transcript=0bp_to_ENSMUST00000009344,NM_028816,uc009jqr.1,uc009jqs.1,uc009jqu.1_5end | |||
|description=CAGE_peak_4_at_Xpo6_5end | |||
|id=chr7:133343911..133343922,- | |||
|ontology_enrichment_celltype=CL:0000540!9.00e-07!33;CL:0000047!9.00e-07!33;CL:0000031!9.00e-07!33;CL:0000404!9.00e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.50e-07,33;CL:0000047,7.50e-07,33;CL:0000031,7.50e-07,33;CL:0000404,7.50e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.52e-08!94;UBERON:0001017!3.55e-08!73;UBERON:0005743!3.55e-08!73;UBERON:0007811!6.39e-08!86;UBERON:0000073!7.47e-08!75;UBERON:0001016!7.47e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.52e-08,73;UBERON:0001016,3.26e-07,75;UBERON:0002020,6.31e-07,34 | |||
|phase1_expression=1.44133962394315,1.39590163055744,0,0.30246421130683,0.500895729946347,0.503637815735669,1.40167584357315,2.1950964985068,6.05391505252167,5.61754863172784,1.02730780935303,0.638177271962691,1.19840510951844,1.31130603628496,0.999329285446988,0.809901069559304,0,1.41957974411207,0.822686601634433,0.84877930359606,1.02051948181284,1.88652807281682,1.56719873483361,0.159992422793407,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,1.84519436275371,0,0.577703239502549,0.166234645358492,0,3.76678467663217,0.7813353445238,2.61761871986899,9.99993529652724,9.56263678941824,2.42755176515577,0.881277725829041,0.709638518536602,1.28482726513177,0.782391344348039,1.74420125104357,2.41654801007919,1.74986909166855,0.419959264876088,1.43752564364972,2.01339127269284,3.62681071005672,3.02484419228218,0.257259436035947,1.43266719969378,0,1.82084814773638,4.7609188134483,1.90149421051854,2.37191172448392,0.889294796111139,0,0,1.4209602298922,0.299600110518405,1.15265491596466,1.34796496001021,2.16009501330705,1.05162480675691,3.42781181284564,3.53389665522582,1.46988959057945,1.43768206527355,0.919218786610021,1.10115880999389,1.27687338085188,0.921639199537461,2.37395317914349,2.01272815925301,2.6045668527838,2.51264699101243,0,1.22238598221448,3.53554302568401,2.56269025438385,1.4911955666024,0.984440513331393,0.529000920747499,0.579728977403356,0,2.03991400112325,0.539703191637817,0,0.896053774194671,0.702222100658759,0.681721290312231,0,0.70667914902068,1.97180787687353,2.56652954828636,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,0,0.34255163915718,0.776813650941515,0.29688427812965,1.04091196059682,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.376999773989026,0.494389935468748,0.433798070759735,0,0.970601099684455,0.883366073841574,0.484875253135222,1.86391761218122,1.17112318804619,2.09446706813455,1.02182822083437,0.958520996047362,0,1.52484272487678,1.3481157546434,1.37250180845588,1.00523481690292,1.39059456153821,1.27857728665165,1.0389402227978,0.811206315338788,0.712875546952214,1.11966273549084,0.252722758433675,0.210441855886474,1.56144531555244,2.29902104433473,1.26043490863744,0.90422890701429,0.816437989815934,0.512454881139399,2.06143794031403,1.55222022443409,2.58681591519411,2.64748512234947,1.58356011747554,1.53437012699302,0.278047249225598,0.696504333044333,0.823128545631774,0.59710280045548,0.702213187313235,1.54408744268829,0.852490498186778,1.24275463521301,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.771335564436891,1.39520366850245,1.07309360559848,0.467061369468678,0.493679549740441,0.32833492815819,0.810688095458557,0.877199924551994,0.219550115291051,0.134206418760372,1.05144974282064,3.19004298375782,0,0.264450566663544,0.426576501070468,2.32236671860439,0.515469845288373,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,1.13800740571849,1.25673363870702,0,1.83286195060783,0.581857461502877,0.841629838683823,0.822074982615345,0.590440591918409,0.627994911365499,0.370191491765402,0.889357881261447,1.33476084572875,1.96558995113203,0.224862112384854,0.811440485554012,1.20588579876208,1.01850340712568,0.287696137450811,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0,0.252578877947112,0.358794827043824,0.964887042726734,0.369506380333209,1.51593129416388,1.62964976442026,1.52770577197669,0.469380496577004,0.837531287209079,0,0.975668239288994,1.57635144106191,0.8858587585951,1.43509291791738,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.642202359951168,0.937693492737625,1.3114795630134,0.252470927204373,1.26203287766503,0.390438744296638,1.72338718186239,1.19484398976276,0.891194696329576,1.69845918473299,2.42886421004937,0.876767573733936,1.58115111178609,1.92792789853084,0.851640511249612,0.712262414669021,0.651547837414304,1.48473110675282,0,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0.776152102696527,1.71469628025274,1.95074257006501,0.891844088010353,1.81003922662333,1.2178597964584,0.469343416127421,1.0591603543191,0.441056796109924,0.32977250588296,1.29171541356724,1.02531972377865,0.716234064018819,0.984845398470368,1.1659233465194,1.48340241608408,1.19609616558497,1.65109494370578,2.77791791054568,0.376736914009382,0.546776910884101,0,2.03974115992626,3.07893195112048,1.93479963326193,0,1.42351197111511,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.809186078308924,0.743881101528023,0.523511883968059,0.259229946583586,0.621339313086926,6.20062232552609,1.19613236835183,1.32366792365678,0.194451188344048,1.03327858782185,0.168956125490778,0.234714477291508,0.651021924219751,1.25831213310853,2.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| |||
|short_description=p4@Xpo6 | |||
}} | |||
Revision as of 11:44, 14 September 2013
| Short description: | p4@Xpo6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Xpo6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000009344, NM_028816, uc009jqr.1, uc009jqs.1, uc009jqu.1_5end |
| EntrezGene: | Xpo6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 7.50e-07 | 33 |
| neuronal stem cell | 7.50e-07 | 33 |
| neuroblast | 7.50e-07 | 33 |
| electrically signaling cell | 7.50e-07 | 33 |
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 7.52e-08 | 73 |
| nervous system | 3.26e-07 | 75 |
| gray matter | 6.31e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
