FFCP PHASE1:Hg19::chrX:41554895..41554940,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=4490|TSSclassifier=N|UniProt=|association_with_transcript=8bp_to_AB464544,CU676634,DQ893098,DQ896370_5end|description=CAGE_peak_3_at_GPR34_5end|id=chrX:41554895..41554940,+|ontology_enrichment_celltype=CL:0000839!8.64e-09!70;CL:0000557!1.38e-08!71;CL:0000766!1.59e-08!76;CL:0002619!9.72e-08!3;CL:0002274!3.30e-07!5;CL:0000457!3.30e-07!5;CL:0002191!3.30e-07!5;CL:0000097!3.30e-07!5;CL:0000831!3.30e-07!5;CL:0002028!3.30e-07!5;CL:0000235!6.56e-07!10|ontology_enrichment_celltype_v019=CL:0002619;1.49e-40;3!CL:0000235;9.85e-21;6|ontology_enrichment_celltype_v019_2=CL:0002619,1.31e-40,3;CL:0000235,1.09e-20,6;CL:0000839,2.85e-09,66;CL:0000557,3.98e-09,67;CL:0000766,1.84e-08,72;CL:0002194,9.92e-08,59;CL:0000576,9.92e-08,59;CL:0000040,9.92e-08,59;CL:0000559,9.92e-08,59;CL:0002009,1.81e-07,61|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.71e-41!115;UBERON:0001049!3.94e-24!57;UBERON:0005068!3.94e-24!57;UBERON:0006241!3.94e-24!57;UBERON:0007135!3.94e-24!57;UBERON:0001017!5.49e-20!82;UBERON:0005743!1.33e-18!86;UBERON:0002616!8.90e-18!59;UBERON:0000955!2.37e-16!69;UBERON:0006238!2.37e-16!69;UBERON:0003080!2.59e-16!42;UBERON:0000073!6.40e-16!94;UBERON:0001016!6.40e-16!94;UBERON:0003075!2.91e-15!86;UBERON:0007284!2.91e-15!86;UBERON:0002780!4.81e-15!41;UBERON:0001890!4.81e-15!41;UBERON:0006240!4.81e-15!41;UBERON:0002346!3.48e-14!90;UBERON:0001893!1.36e-13!34;UBERON:0002791!1.25e-12!33;UBERON:0002020!2.85e-12!34;UBERON:0003528!2.85e-12!34;UBERON:0001869!2.30e-11!32;UBERON:0002619!3.41e-10!22;UBERON:0001950!1.45e-09!20;UBERON:0003056!1.86e-09!61;UBERON:0003076!3.45e-09!15;UBERON:0003057!3.45e-09!15;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0002298!1.46e-08!8;UBERON:0002390!4.16e-08!102;UBERON:0003061!4.16e-08!102;UBERON:0000153!7.86e-08!129;UBERON:0007811!7.86e-08!129;UBERON:0002193!1.57e-07!112;UBERON:0000062!1.62e-07!511;UBERON:0000033!3.07e-07!123;UBERON:0002240!3.19e-07!3;UBERON:0002371!5.41e-07!80|ontology_enrichment_uberon_v019=UBERON:0000029;1.07e-14;1!UBERON:0002171;2.10e-14;1!UBERON:0006518;2.10e-14;1!UBERON:0008949;2.10e-14;1!UBERON:0000101;2.10e-14;1!UBERON:0002167;2.10e-14;1|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.36e-15,1;UBERON:0002171,1.61e-14,1;UBERON:0006518,1.61e-14,1;UBERON:0008949,1.61e-14,1;UBERON:0000101,1.61e-14,1;UBERON:0002167,1.61e-14,1;UBERON:0002405,2.31e-08,93;UBERON:0002371,5.45e-08,76;UBERON:0001474,2.28e-07,82;UBERON:0002193,4.26e-07,108|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,3.58264758783879,1.6194683300949,3.60605794687861,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.419317291016752,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,3.60998579454227,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51579964002488,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4490 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=8bp_to_AB464544,CU676634,DQ893098,DQ896370_5end | |||
|description=CAGE_peak_3_at_GPR34_5end | |||
|id=chrX:41554895..41554940,+ | |||
|ontology_enrichment_celltype=CL:0000839!8.64e-09!70;CL:0000557!1.38e-08!71;CL:0000766!1.59e-08!76;CL:0002619!9.72e-08!3;CL:0002274!3.30e-07!5;CL:0000457!3.30e-07!5;CL:0002191!3.30e-07!5;CL:0000097!3.30e-07!5;CL:0000831!3.30e-07!5;CL:0002028!3.30e-07!5;CL:0000235!6.56e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.49e-40;3!CL:0000235;9.85e-21;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.31e-40,3;CL:0000235,1.09e-20,6;CL:0000839,2.85e-09,66;CL:0000557,3.98e-09,67;CL:0000766,1.84e-08,72;CL:0002194,9.92e-08,59;CL:0000576,9.92e-08,59;CL:0000040,9.92e-08,59;CL:0000559,9.92e-08,59;CL:0002009,1.81e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-41!115;UBERON:0001049!3.94e-24!57;UBERON:0005068!3.94e-24!57;UBERON:0006241!3.94e-24!57;UBERON:0007135!3.94e-24!57;UBERON:0001017!5.49e-20!82;UBERON:0005743!1.33e-18!86;UBERON:0002616!8.90e-18!59;UBERON:0000955!2.37e-16!69;UBERON:0006238!2.37e-16!69;UBERON:0003080!2.59e-16!42;UBERON:0000073!6.40e-16!94;UBERON:0001016!6.40e-16!94;UBERON:0003075!2.91e-15!86;UBERON:0007284!2.91e-15!86;UBERON:0002780!4.81e-15!41;UBERON:0001890!4.81e-15!41;UBERON:0006240!4.81e-15!41;UBERON:0002346!3.48e-14!90;UBERON:0001893!1.36e-13!34;UBERON:0002791!1.25e-12!33;UBERON:0002020!2.85e-12!34;UBERON:0003528!2.85e-12!34;UBERON:0001869!2.30e-11!32;UBERON:0002619!3.41e-10!22;UBERON:0001950!1.45e-09!20;UBERON:0003056!1.86e-09!61;UBERON:0003076!3.45e-09!15;UBERON:0003057!3.45e-09!15;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0002298!1.46e-08!8;UBERON:0002390!4.16e-08!102;UBERON:0003061!4.16e-08!102;UBERON:0000153!7.86e-08!129;UBERON:0007811!7.86e-08!129;UBERON:0002193!1.57e-07!112;UBERON:0000062!1.62e-07!511;UBERON:0000033!3.07e-07!123;UBERON:0002240!3.19e-07!3;UBERON:0002371!5.41e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.07e-14;1!UBERON:0002171;2.10e-14;1!UBERON:0006518;2.10e-14;1!UBERON:0008949;2.10e-14;1!UBERON:0000101;2.10e-14;1!UBERON:0002167;2.10e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.36e-15,1;UBERON:0002171,1.61e-14,1;UBERON:0006518,1.61e-14,1;UBERON:0008949,1.61e-14,1;UBERON:0000101,1.61e-14,1;UBERON:0002167,1.61e-14,1;UBERON:0002405,2.31e-08,93;UBERON:0002371,5.45e-08,76;UBERON:0001474,2.28e-07,82;UBERON:0002193,4.26e-07,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,3.58264758783879,1.6194683300949,3.60605794687861,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.419317291016752,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,3.60998579454227,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51579964002488,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.52893040697076,0,0,0.747511887973863,0,1.65695622138878,2.48083010905975,0,0,0,0.544017803369474,2.0055191521816,0.612691153526923,0.655745261419609,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0.785233868459781,0.594092800654172,0.8453114551668,0,0.657887425858975,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0.829169439458779,0.310298987585686,0.852935927603924,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p3@GPR34 | |||
}} |
Revision as of 11:53, 14 September 2013
Short description: | p3@GPR34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GPR34_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_AB464544, CU676634, DQ893098, DQ896370_5end |
EntrezGene: | GPR34 |
HGNC: | 4490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.31e-40 | 3 |
macrophage | 1.09e-20 | 6 |
myeloid lineage restricted progenitor cell | 2.85e-09 | 66 |
granulocyte monocyte progenitor cell | 3.98e-09 | 67 |
myeloid leukocyte | 1.84e-08 | 72 |
monopoietic cell | 9.92e-08 | 59 |
monocyte | 9.92e-08 | 59 |
monoblast | 9.92e-08 | 59 |
promonocyte | 9.92e-08 | 59 |
macrophage dendritic cell progenitor | 1.81e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.36e-15 | 1 |
lower lobe of right lung | 1.61e-14 | 1 |
right lung lobe | 1.61e-14 | 1 |
lower lobe of lung | 1.61e-14 | 1 |
lobe of lung | 1.61e-14 | 1 |
right lung | 1.61e-14 | 1 |
immune system | 2.31e-08 | 93 |
bone marrow | 5.45e-08 | 76 |
bone element | 2.28e-07 | 82 |
hemolymphoid system | 4.26e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.