FFCP PHASE1:Mm9::chr7:16842874..16842877,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:16842874..16842877,-|id=chr7:16842874..16842877,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,3.58e-22,3;CL:0002540,3.58e-22,3;CL:0000355,4.59e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6|ontology_enrichment_uberon=UBERON:0002204!3.27e-09!32;UBERON:0001474!1.49e-08!22;UBERON:0004765!1.49e-08!22;UBERON:0001434!1.49e-08!22;UBERON:0002529!1.25e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.80e-14,32;UBERON:0000383,4.69e-12,10;UBERON:0001374,2.89e-08,1;UBERON:0004252,2.89e-08,1;UBERON:0003663,2.89e-08,1;UBERON:0005090,2.89e-08,1;UBERON:0001630,2.89e-08,1;UBERON:0003661,2.89e-08,1;UBERON:0010890,2.89e-08,1;UBERON:0001383,2.89e-08,1;UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002371,1.65e-07,16|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6486070757918,14.0640362014284,15.7057123192139,65.2936951714426,39.6166381275899,20.3914348273085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,0,1.52484272487678,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,1.98914449576915,0,0,0,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0.56748166682099,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0.54390568381871,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0.206386867963223,0.740778109478847,0,0.27338845544205,0,0,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr7:16842874..16842877,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:16842874..16842877,- | |||
|id=chr7:16842874..16842877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.58e-22,3;CL:0002540,3.58e-22,3;CL:0000355,4.59e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.27e-09!32;UBERON:0001474!1.49e-08!22;UBERON:0004765!1.49e-08!22;UBERON:0001434!1.49e-08!22;UBERON:0002529!1.25e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.80e-14,32;UBERON:0000383,4.69e-12,10;UBERON:0001374,2.89e-08,1;UBERON:0004252,2.89e-08,1;UBERON:0003663,2.89e-08,1;UBERON:0005090,2.89e-08,1;UBERON:0001630,2.89e-08,1;UBERON:0003661,2.89e-08,1;UBERON:0010890,2.89e-08,1;UBERON:0001383,2.89e-08,1;UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0002371,1.65e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6486070757918,14.0640362014284,15.7057123192139,65.2936951714426,39.6166381275899,20.3914348273085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,0,1.52484272487678,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,1.98914449576915,0,0,0,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0.56748166682099,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0.54390568381871,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0.206386867963223,0.740778109478847,0,0.27338845544205,0,0,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:16842874..16842877,- | |||
}} |
Revision as of 12:33, 14 September 2013
Short description: | p@chr7:16842874..16842877, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16842874..16842877, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.58e-22 | 3 |
mesenchymal stem cell of the bone marrow | 3.58e-22 | 3 |
multi-potent skeletal muscle stem cell | 4.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.80e-14 | 32 |
musculature of body | 4.69e-12 | 10 |
biceps femoris | 2.89e-08 | 1 |
hindlimb stylopod muscle | 2.89e-08 | 1 |
hindlimb muscle | 2.89e-08 | 1 |
muscle structure | 2.89e-08 | 1 |
muscle organ | 2.89e-08 | 1 |
limb muscle | 2.89e-08 | 1 |
pelvic complex muscle | 2.89e-08 | 1 |
muscle of leg | 2.89e-08 | 1 |
skeletal muscle tissue | 4.59e-08 | 9 |
striated muscle tissue | 4.59e-08 | 9 |
muscle tissue | 4.59e-08 | 9 |
multilaminar epithelium | 4.59e-08 | 9 |
epithelial vesicle | 4.59e-08 | 9 |
musculature | 4.59e-08 | 9 |
somite | 4.59e-08 | 9 |
myotome | 4.59e-08 | 9 |
presomitic mesoderm | 4.59e-08 | 9 |
presumptive segmental plate | 4.59e-08 | 9 |
dermomyotome | 4.59e-08 | 9 |
trunk paraxial mesoderm | 4.59e-08 | 9 |
bone marrow | 1.65e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.59e-23 | 3 |
muscle cancer | 5.59e-23 | 3 |
organ system cancer | 8.07e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.