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FFCP PHASE1:Mm9::chr7:17428435..17428452,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=101540|HGNC=|MCL_coexpression_id=1721|UniProt=Q8BZ03|association_with_transcript=21bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end|description=CAGE_peak_4_at_Prkd2_5end|id=chr7:17428435..17428452,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!5.02e-09!41;UBERON:0001004!1.01e-08!42;UBERON:0000926!8.75e-08!193;UBERON:0004120!8.75e-08!193;UBERON:0006603!8.75e-08!193;UBERON:0004177!2.51e-07!29;UBERON:0003081!6.16e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.01e-10,41;UBERON:0001004,3.93e-10,42;UBERON:0004177,2.82e-09,29;UBERON:0005057,2.82e-09,29;UBERON:0003081,3.18e-08,87;UBERON:0002370,3.57e-08,23;UBERON:0000974,3.57e-08,23;UBERON:0004807,3.57e-08,23;UBERON:0005058,3.57e-08,23;UBERON:0003351,3.57e-08,23;UBERON:0009113,3.57e-08,23;UBERON:0003295,3.57e-08,23;UBERON:0009722,3.57e-08,23;UBERON:0005562,3.57e-08,23;UBERON:0007690,3.57e-08,23;UBERON:0000077,1.29e-07,35;UBERON:0006562,1.75e-07,24;UBERON:0003408,1.75e-07,24;UBERON:0001557,1.75e-07,24;UBERON:0001042,1.75e-07,24;UBERON:0008814,1.75e-07,24;UBERON:0009145,1.75e-07,24|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,6.32704284863724,7.74337971834167,14.7460651582856,0.171217968225505,0.239316476986009,7.36163138704185,8.74204024189974,0.666219523631325,1.41732687172878,0,5.52058789376916,4.9361196098066,2.97072756258621,2.29616883407888,0.893618560807968,0,0.95995453676044,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,4.71171369576418,3.52938892818609,3.41522742479223,2.91306211818692,1.25896817975577,1.01376931219515,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,3.02008690903925,10.1550699881588,8.73843877770406,0.257259436035947,0,0,0.202316460859598,0,0,4.06613438482959,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,1.14260393761521,1.10434270475807,0.244981598429908,0,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,1.04182674111352,0,0,0,0,0.427115042397309,0.745597783301202,0.075726193333184,0.151143120213571,11.5945795480671,2.58127163094416,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,1.37020655662872,17.6077760880077,1.48442139064825,1.21439728736295,1.21786191324856,0.691846491768175,0.452167921657868,0.940709657085638,1.0053327306374,0.494389935468748,4.19338135067744,0.884610551949874,1.7794353494215,1.54589062922275,0.484875253135222,0,0.292780797011547,0.209446706813455,1.27728527604296,1.55759661857696,0,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0,0,0.162241263067758,3.05518091550949,2.36373244159177,2.27450482590307,0.420883711772948,1.30120442962704,0.689706313300419,0.540186389416048,0.753524089178575,0.816437989815934,0.2562274405697,0.937017245597288,1.03481348295606,0.431135985865684,1.51284864134255,1.05570674498369,2.41115305670332,3.61461423993277,4.179025998266,2.46938563689532,0.796137067273973,0,0,0,0.828503090142008,2.11073453982987,1.08037236876609,2.84093682702252,2.55793501271625,0.771335564436891,2.09280550275367,1.60964040839772,4.08678698285093,2.13927804887525,7.05920095540109,5.59374785866405,3.21639972335731,5.92785311285837,4.83143107537338,0.210289948564127,0.514523061896422,1.65209391491899,0.264450566663544,0.426576501070468,0.464473343720877,1.03093969057675,1.61346819698674,0.889512175379481,0.951128130562796,0.474529061544512,0.494096864172033,1.25667604400135,1.98956472041151,0.779856348476481,0,0.648414149624083,0.597423819763102,2.0863469104839,1.14248512609729,0,1.4255592949172,1.93952487167626,1.96380295692892,2.27651533647326,2.06654207171443,2.19798218977925,0.987177311374404,1.1858105083486,0.500535317148282,0.393117990226406,0,0.405720242777006,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,1.09824565275233,2.87536413054709,0.372140947668503,0.936113019343682,2.02063102357689,0.538192240565737,0.482443521363367,5.35784251483154,0.568474235311454,1.46668478797823,2.20668611507745,1.64283173801951,3.35012514883632,4.52282917683426,6.04914308359176,5.99013547603526,4.65075848262427,4.30527875375215,7.70157579163969,4.14443956478149,6.50920763616802,0,0,1.96705709207614,1.37968373152366,0.642202359951168,0.234423373184406,0.491804836130026,2.7771801992481,0.631016438832513,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,1.18586333383957,0.321321316421807,1.84522110770749,1.95872164033981,1.79175655288934,1.64970122972535,0,0.971122544619926,0.906970670894253,1.13163047853539,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.712994756769443,2.52829406348653,0,3.09406629744561,1.02131881726136,0,1.4229455216103,1.50035924522115,0.709360934569094,1.07021290561242,1.15184314421485,1.8267896946876,0.469343416127421,0.847328283455281,0.220528398054962,1.6488625294148,2.42196640043858,1.5078231232039,1.55184047204077,0.492422699235184,1.45740418314925,0.556275906031529,2.56306321196779,2.27025554759545,2.40752885580625,1.13021074202815,2.59719032669948,1.14389086603261,6.62915876976036,5.73800954526998,5.11339903076368,2.86401185404534,0.949007980743406,2.23651413839534,2.05210147561422,1.04544148007234,0.655087691238533,1.48350781023303,0.991841468704031,0.523511883968059,0.129614973291793,0.621339313086926,0,0.448549638131936,0.165458490457098,0.972255941720238,0.645799117388655,0.506868376472335,1.40828686374905,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,9.16432249821717,1.41907650703115,2.87590680061516,3.63778304337826,4.65469408735452,7.9472541912506,6.73094517311826,8.27061352177632,8.6831146955407,8.23033511873998,8.87270429204197,9.84324595471499,11.5454209968395,13.6745975552436,0.680191150845634,0,0,0.167884616364078,1.54551675225752,2.25218970541418,1.64836461840539,0.643105137237198,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.726511433089237,1.19707462020309,1.19513524027894,1.45864030240976,1.67690530102386,2.5738091183002,1.77797382241292,1.85431551515005,3.20919209591815,1.51618327058278,2.78827229879264,1.50901073108861,1.40462261204824,2.56100609619477,2.35485422718014,3.33405583898152,0.927074607558844,1.92909220463705,1.23625770240992,2.20798380201596,3.42869252385415,1.59728225543404,1.66905332963125,2.76158191601424,1.78807822789128,1.60767754994185,1.46342378298218,1.8414879800649,1.90125759384206,1.12228454331548,0.711810108745045,2.06859412988683,0.818462086339379,3.71848418846318,1.73615949883027,1.99848462350357,1.87145286756327,1.28922632428979,1.53030665655075,2.20591419119516,2.08681052058379|short_description=p4@Prkd2}}
|EntrezGene=101540
|HGNC=
|MCL_coexpression_id=1721
|UniProt=Q8BZ03
|association_with_transcript=21bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end
|description=CAGE_peak_4_at_Prkd2_5end
|id=chr7:17428435..17428452,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!5.02e-09!41;UBERON:0001004!1.01e-08!42;UBERON:0000926!8.75e-08!193;UBERON:0004120!8.75e-08!193;UBERON:0006603!8.75e-08!193;UBERON:0004177!2.51e-07!29;UBERON:0003081!6.16e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.01e-10,41;UBERON:0001004,3.93e-10,42;UBERON:0004177,2.82e-09,29;UBERON:0005057,2.82e-09,29;UBERON:0003081,3.18e-08,87;UBERON:0002370,3.57e-08,23;UBERON:0000974,3.57e-08,23;UBERON:0004807,3.57e-08,23;UBERON:0005058,3.57e-08,23;UBERON:0003351,3.57e-08,23;UBERON:0009113,3.57e-08,23;UBERON:0003295,3.57e-08,23;UBERON:0009722,3.57e-08,23;UBERON:0005562,3.57e-08,23;UBERON:0007690,3.57e-08,23;UBERON:0000077,1.29e-07,35;UBERON:0006562,1.75e-07,24;UBERON:0003408,1.75e-07,24;UBERON:0001557,1.75e-07,24;UBERON:0001042,1.75e-07,24;UBERON:0008814,1.75e-07,24;UBERON:0009145,1.75e-07,24
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,6.32704284863724,7.74337971834167,14.7460651582856,0.171217968225505,0.239316476986009,7.36163138704185,8.74204024189974,0.666219523631325,1.41732687172878,0,5.52058789376916,4.9361196098066,2.97072756258621,2.29616883407888,0.893618560807968,0,0.95995453676044,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,4.71171369576418,3.52938892818609,3.41522742479223,2.91306211818692,1.25896817975577,1.01376931219515,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,3.02008690903925,10.1550699881588,8.73843877770406,0.257259436035947,0,0,0.202316460859598,0,0,4.06613438482959,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,1.14260393761521,1.10434270475807,0.244981598429908,0,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,1.04182674111352,0,0,0,0,0.427115042397309,0.745597783301202,0.075726193333184,0.151143120213571,11.5945795480671,2.58127163094416,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,1.37020655662872,17.6077760880077,1.48442139064825,1.21439728736295,1.21786191324856,0.691846491768175,0.452167921657868,0.940709657085638,1.0053327306374,0.494389935468748,4.19338135067744,0.884610551949874,1.7794353494215,1.54589062922275,0.484875253135222,0,0.292780797011547,0.209446706813455,1.27728527604296,1.55759661857696,0,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0,0,0.162241263067758,3.05518091550949,2.36373244159177,2.27450482590307,0.420883711772948,1.30120442962704,0.689706313300419,0.540186389416048,0.753524089178575,0.816437989815934,0.2562274405697,0.937017245597288,1.03481348295606,0.431135985865684,1.51284864134255,1.05570674498369,2.41115305670332,3.61461423993277,4.179025998266,2.46938563689532,0.796137067273973,0,0,0,0.828503090142008,2.11073453982987,1.08037236876609,2.84093682702252,2.55793501271625,0.771335564436891,2.09280550275367,1.60964040839772,4.08678698285093,2.13927804887525,7.05920095540109,5.59374785866405,3.21639972335731,5.92785311285837,4.83143107537338,0.210289948564127,0.514523061896422,1.65209391491899,0.264450566663544,0.426576501070468,0.464473343720877,1.03093969057675,1.61346819698674,0.889512175379481,0.951128130562796,0.474529061544512,0.494096864172033,1.25667604400135,1.98956472041151,0.779856348476481,0,0.648414149624083,0.597423819763102,2.0863469104839,1.14248512609729,0,1.4255592949172,1.93952487167626,1.96380295692892,2.27651533647326,2.06654207171443,2.19798218977925,0.987177311374404,1.1858105083486,0.500535317148282,0.393117990226406,0,0.405720242777006,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,1.09824565275233,2.87536413054709,0.372140947668503,0.936113019343682,2.02063102357689,0.538192240565737,0.482443521363367,5.35784251483154,0.568474235311454,1.46668478797823,2.20668611507745,1.64283173801951,3.35012514883632,4.52282917683426,6.04914308359176,5.99013547603526,4.65075848262427,4.30527875375215,7.70157579163969,4.14443956478149,6.50920763616802,0,0,1.96705709207614,1.37968373152366,0.642202359951168,0.234423373184406,0.491804836130026,2.7771801992481,0.631016438832513,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,1.18586333383957,0.321321316421807,1.84522110770749,1.95872164033981,1.79175655288934,1.64970122972535,0,0.971122544619926,0.906970670894253,1.13163047853539,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.712994756769443,2.52829406348653,0,3.09406629744561,1.02131881726136,0,1.4229455216103,1.50035924522115,0.709360934569094,1.07021290561242,1.15184314421485,1.8267896946876,0.469343416127421,0.847328283455281,0.220528398054962,1.6488625294148,2.42196640043858,1.5078231232039,1.55184047204077,0.492422699235184,1.45740418314925,0.556275906031529,2.56306321196779,2.27025554759545,2.40752885580625,1.13021074202815,2.59719032669948,1.14389086603261,6.62915876976036,5.73800954526998,5.11339903076368,2.86401185404534,0.949007980743406,2.23651413839534,2.05210147561422,1.04544148007234,0.655087691238533,1.48350781023303,0.991841468704031,0.523511883968059,0.129614973291793,0.621339313086926,0,0.448549638131936,0.165458490457098,0.972255941720238,0.645799117388655,0.506868376472335,1.40828686374905,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,9.16432249821717,1.41907650703115,2.87590680061516,3.63778304337826,4.65469408735452,7.9472541912506,6.73094517311826,8.27061352177632,8.6831146955407,8.23033511873998,8.87270429204197,9.84324595471499,11.5454209968395,13.6745975552436,0.680191150845634,0,0,0.167884616364078,1.54551675225752,2.25218970541418,1.64836461840539,0.643105137237198,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0.726511433089237,1.19707462020309,1.1951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|short_description=p4@Prkd2
}}

Revision as of 12:35, 14 September 2013

Short description:p4@Prkd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Prkd2_5end
Coexpression cluster:MCL_coexpression_mm9:1721
Association with transcript: 21bp_to_ENSMUST00000086104, NM_178900, uc009fih.1_5end
EntrezGene:Prkd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Prkd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H917.61
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E34.09
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G15.59
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C48.68
thymus, neonate N07.CNhs11211.713-19D38.23
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A29.84
thymus, neonate N25.CNhs11125.1362-25G711.55
thymus, neonate N30.CNhs11132.1393-42G213.67
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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