FFCP PHASE1:Hg19::chrX:99891878..99891889,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7105|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11858|TSSclassifier=S|UniProt=E7EUC3|association_with_transcript=-30bp_to_ENST00000431386_5end|description=CAGE_peak_7_at_TSPAN6_5end|id=chrX:99891878..99891889,-|ontology_enrichment_celltype=CL:0002139!4.88e-14!24;CL:0000071!1.08e-09!18;CL:0002546!1.08e-09!18;CL:0000115!1.16e-08!35|ontology_enrichment_celltype_v019=CL:0002322;1.32e-21;5!CL:0002138;5.30e-17;6!CL:0000540;2.52e-11;6!CL:0000404;2.52e-11;6!CL:0002321;5.66e-07;15|ontology_enrichment_celltype_v019_2=CL:0002322,1.11e-21,5;CL:0005020,8.00e-17,6;CL:0002138,8.00e-17,6;CL:0005022,8.00e-17,6;CL:0000540,2.94e-11,6;CL:0000031,2.94e-11,6;CL:0000404,2.94e-11,6;CL:0000047,1.87e-08,8|ontology_enrichment_development_v019=CL:0005022;5.30e-17;6!UBERON:0006241;7.95e-13;3!UBERON:0003057;7.95e-13;3!CL:0000031;2.52e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.71e-14!115;UBERON:0004111!7.72e-13!241;UBERON:0000477!3.21e-12!286;UBERON:0001049!2.41e-11!57;UBERON:0005068!2.41e-11!57;UBERON:0006241!2.41e-11!57;UBERON:0007135!2.41e-11!57;UBERON:0000025!2.82e-11!194;UBERON:0005743!5.94e-11!86;UBERON:0001017!6.90e-11!82;UBERON:0000073!2.49e-10!94;UBERON:0001016!2.49e-10!94;UBERON:0001986!1.08e-09!18;UBERON:0004638!1.08e-09!18;UBERON:0004852!1.08e-09!18;UBERON:0002616!1.17e-09!59;UBERON:0000468!1.43e-09!659;UBERON:0002346!1.44e-09!90;UBERON:0000119!1.70e-09!312;UBERON:0000483!5.26e-09!309;UBERON:0003075!7.28e-09!86;UBERON:0007284!7.28e-09!86;UBERON:0000955!7.43e-09!69;UBERON:0006238!7.43e-09!69;UBERON:0000922!2.05e-08!612;UBERON:0003080!2.51e-08!42;UBERON:0006914!9.05e-08!25;UBERON:0002780!9.97e-08!41;UBERON:0001890!9.97e-08!41;UBERON:0006240!9.97e-08!41;UBERON:0000487!1.13e-07!22;UBERON:0003056!1.89e-07!61|ontology_enrichment_uberon_v019=UBERON:0002240;7.95e-13;3!UBERON:0005174;7.95e-13;3!UBERON:0001137;7.95e-13;3!UBERON:0001473;1.10e-12;8!UBERON:0004536;1.10e-12;8!UBERON:0006558;1.10e-12;8!UBERON:0000922;2.33e-12;49!UBERON:0002465;4.34e-10;10!UBERON:0001905;3.04e-09;2!UBERON:0002757;3.04e-09;2!UBERON:0010134;3.04e-09;2!UBERON:0005408;3.04e-09;2!UBERON:0001899;3.04e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.49e-12,8;UBERON:0004536,1.49e-12,8;UBERON:0006558,1.49e-12,8;UBERON:0002240,1.53e-12,3;UBERON:0005174,1.53e-12,3;UBERON:0001137,1.53e-12,3;UBERON:0002465,5.51e-10,10;UBERON:0001905,5.31e-09,2;UBERON:0002757,5.31e-09,2;UBERON:0010134,5.31e-09,2;UBERON:0005408,5.31e-09,2;UBERON:0001899,5.31e-09,2|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0,2.19093027116212,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.825354125820202,0.208994966536811,1.29208379584664,3.20189636418039,2.67776490211736,0.805658634218294,0.760272105718513,0.732186172644509,0.367663080345869,0.81014194788176,0.892997282840798,0.22452937262617,0.450445921933289,0,1.89853131913626,0.916008719652036,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0,0,0,0.184099797284599,0,0,0,0,0,0,0,5.48881677583179,3.31324420803713,4.99633954338929,1.45125477021519,2.27088765788066,1.09493207722749,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0.219500570817251,0,0,0.185176890317059,0,0,1.44331342025273,0.34779121492523,0.587043471179108,1.29929802984966,0.462985512576611,1.14152491340759,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.517086863031111,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,1.00509759200609,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.29001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7105 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11858 | |||
|TSSclassifier=S | |||
|UniProt=E7EUC3 | |||
|association_with_transcript=-30bp_to_ENST00000431386_5end | |||
|description=CAGE_peak_7_at_TSPAN6_5end | |||
|id=chrX:99891878..99891889,- | |||
|ontology_enrichment_celltype=CL:0002139!4.88e-14!24;CL:0000071!1.08e-09!18;CL:0002546!1.08e-09!18;CL:0000115!1.16e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.32e-21;5!CL:0002138;5.30e-17;6!CL:0000540;2.52e-11;6!CL:0000404;2.52e-11;6!CL:0002321;5.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.11e-21,5;CL:0005020,8.00e-17,6;CL:0002138,8.00e-17,6;CL:0005022,8.00e-17,6;CL:0000540,2.94e-11,6;CL:0000031,2.94e-11,6;CL:0000404,2.94e-11,6;CL:0000047,1.87e-08,8 | |||
|ontology_enrichment_development_v019=CL:0005022;5.30e-17;6!UBERON:0006241;7.95e-13;3!UBERON:0003057;7.95e-13;3!CL:0000031;2.52e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.71e-14!115;UBERON:0004111!7.72e-13!241;UBERON:0000477!3.21e-12!286;UBERON:0001049!2.41e-11!57;UBERON:0005068!2.41e-11!57;UBERON:0006241!2.41e-11!57;UBERON:0007135!2.41e-11!57;UBERON:0000025!2.82e-11!194;UBERON:0005743!5.94e-11!86;UBERON:0001017!6.90e-11!82;UBERON:0000073!2.49e-10!94;UBERON:0001016!2.49e-10!94;UBERON:0001986!1.08e-09!18;UBERON:0004638!1.08e-09!18;UBERON:0004852!1.08e-09!18;UBERON:0002616!1.17e-09!59;UBERON:0000468!1.43e-09!659;UBERON:0002346!1.44e-09!90;UBERON:0000119!1.70e-09!312;UBERON:0000483!5.26e-09!309;UBERON:0003075!7.28e-09!86;UBERON:0007284!7.28e-09!86;UBERON:0000955!7.43e-09!69;UBERON:0006238!7.43e-09!69;UBERON:0000922!2.05e-08!612;UBERON:0003080!2.51e-08!42;UBERON:0006914!9.05e-08!25;UBERON:0002780!9.97e-08!41;UBERON:0001890!9.97e-08!41;UBERON:0006240!9.97e-08!41;UBERON:0000487!1.13e-07!22;UBERON:0003056!1.89e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.95e-13;3!UBERON:0005174;7.95e-13;3!UBERON:0001137;7.95e-13;3!UBERON:0001473;1.10e-12;8!UBERON:0004536;1.10e-12;8!UBERON:0006558;1.10e-12;8!UBERON:0000922;2.33e-12;49!UBERON:0002465;4.34e-10;10!UBERON:0001905;3.04e-09;2!UBERON:0002757;3.04e-09;2!UBERON:0010134;3.04e-09;2!UBERON:0005408;3.04e-09;2!UBERON:0001899;3.04e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.49e-12,8;UBERON:0004536,1.49e-12,8;UBERON:0006558,1.49e-12,8;UBERON:0002240,1.53e-12,3;UBERON:0005174,1.53e-12,3;UBERON:0001137,1.53e-12,3;UBERON:0002465,5.51e-10,10;UBERON:0001905,5.31e-09,2;UBERON:0002757,5.31e-09,2;UBERON:0010134,5.31e-09,2;UBERON:0005408,5.31e-09,2;UBERON:0001899,5.31e-09,2 | |||
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| |||
|short_description=p7@TSPAN6 | |||
}} |
Revision as of 12:43, 14 September 2013
Short description: | p7@TSPAN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TSPAN6_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000431386_5end |
EntrezGene: | TSPAN6 |
HGNC: | 11858 |
UniProt: | E7EUC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.11e-21 | 5 |
lymphangioblast | 8.00e-17 | 6 |
endothelial cell of lymphatic vessel | 8.00e-17 | 6 |
vascular lymphangioblast | 8.00e-17 | 6 |
neuron | 2.94e-11 | 6 |
neuroblast | 2.94e-11 | 6 |
electrically signaling cell | 2.94e-11 | 6 |
neuronal stem cell | 1.87e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.49e-12 | 8 |
lymph vasculature | 1.49e-12 | 8 |
lymphatic part of lymphoid system | 1.49e-12 | 8 |
spinal cord | 1.53e-12 | 3 |
dorsal region element | 1.53e-12 | 3 |
dorsum | 1.53e-12 | 3 |
lymphoid system | 5.51e-10 | 10 |
pineal body | 5.31e-09 | 2 |
regional part of epithalamus | 5.31e-09 | 2 |
secretory circumventricular organ | 5.31e-09 | 2 |
circumventricular organ | 5.31e-09 | 2 |
epithalamus | 5.31e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.