FFCP PHASE1:Mm9::chr7:29157359..29157390,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=101497|HGNC=|UniProt=E9QKB6|association_with_transcript=-107bp_to_ENSMUST00000094644_5end|description=CAGE_peak_5_at_Plekhg2_5end|id=chr7:29157359..29157390,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,1.27e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.98e-07,23;UBERON:0000974,2.98e-07,23;UBERON:0004807,2.98e-07,23;UBERON:0005058,2.98e-07,23;UBERON:0003351,2.98e-07,23;UBERON:0009113,2.98e-07,23;UBERON:0003295,2.98e-07,23;UBERON:0009722,2.98e-07,23;UBERON:0005562,2.98e-07,23;UBERON:0007690,2.98e-07,23;UBERON:0000072,5.82e-07,27|phase1_expression=1.12104192973356,1.39590163055744,2.27499619694768,0.90739263392049,2.00358291978539,0.671517087647559,0.233612640595526,3.87369970324729,0.281577444303333,1.17032263160997,0.171217968225505,0.638177271962691,3.0816131387617,4.89554253546385,0.333109761815663,0.404950534779652,0,4.41647031501533,2.05671650408608,2.12194825899015,0.765389611359628,0.496454756004426,0,1.11994695955385,1.60586496747019,2.8711598205751,1.29228598847722,0.215471232685889,0.950117097281869,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0,0,0,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,1.6366586336825,0.709638518536602,0.917733760808408,3.12956537739216,4.57852828398938,4.61340983742391,5.8328969722285,1.95980990275508,5.75010257459886,1.17447824240415,3.62681071005672,0.672187598284928,1.54355661621568,1.71920063963254,1.54701627683233,1.01158230429799,0,1.26766280701236,3.38844532069132,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,2.09720077362883,3.84218305321555,1.97010263386108,1.4850653216486,1.89292465216244,0.285650984403804,0.441737081903227,1.22490799214954,1.15014565221884,0,0,0.127687338085188,0.153606533256243,0.923204014111357,0.365950574409639,1.04182674111352,0,0,0,0,0,0,0.681535739998656,0.906858721281426,1.44932244350839,0,0,0,0,0,0.280888840263504,1.36344258062446,0.779358013808606,1.06001872353102,3.52108549441701,2.56652954828636,0,0,1.94841936910093,1.52015919285059,0.505524445014783,0.34255163915718,0.776813650941515,0.742210695324124,0.520455980298408,0.304465478312141,0.922461989024234,0.904335843315735,1.05829836422134,0,2.22475470960936,0.722996784599558,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0,0,0,1.00523481690292,0,0,0,0.162241263067758,1.73126918545538,1.24406970610093,0.252722758433675,0,0.910843100738926,1.37941262660084,0.900310649026746,2.26057226753573,0.884474488967262,2.17793324484245,0.937017245597288,0.258703370739016,4.095791865724,2.45837904218165,3.16712023495108,1.09597866213787,0.278047249225598,1.0447564995665,0.411564272815887,1.59227413454795,0,0.257347907114715,0,1.24275463521301,0.938104239924385,1.08037236876609,2.13070262026689,0.787056926989615,0.771335564436891,0.930135779001631,1.3413670069981,0.583826711835847,0.16455984991348,0.32833492815819,0.648550476366846,1.02339991197733,0.219550115291051,0.671032093801859,0.630869845692382,1.54356918568927,1.32167513193519,0.793351699990633,2.13288250535234,1.16118335930219,0.644337306610467,0.80673409849337,0.22237804384487,0.951128130562796,0.949058123089023,1.4822905925161,0.754005626400808,0.397912944082302,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.948339504765408,1.48523066392647,3.38123207019241,1.83286195060783,1.55161989734101,1.19230893813542,1.07502113111237,0.738050739898011,0.156998727841375,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.763877555344259,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.947457058852424,0.977789858652155,1.01847051465113,0.469380496577004,3.01511263395268,1.19021820443007,0.780534591431195,2.83743259391144,0.8858587585951,2.87018583583477,1.3109065177259,0.863424909329478,1.44649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,0.716906393857656,1.11399337041197,1.98153571552183,2.02405350837447,1.75353514746787,1.18586333383957,0,0.99358059645788,1.95872164033981,2.76907830901079,2.47455184458803,1.32745138339963,0.971122544619926,0,0.377210159511796,0,0,0,1.09060118843252,0.356497378384721,0.316036757935816,0,1.03135543248187,0,2.52085531643834,1.81102157295856,1.07168517515796,1.59606210278046,1.42695054081656,1.48094118541909,0.608929898229199,0.938686832254841,1.69465656691056,0.220528398054962,0.49465875882444,1.45317984026315,1.14594557363496,0.954978752025092,0.328281799490123,1.1659233465194,0.18542530201051,0.854354403989263,1.23832120777933,0.370389054739423,0.565105371014073,0.27338845544205,1.37266903923914,0.339956859987711,0.279902904647316,0.1381999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| ||
|EntrezGene=101497 | |||
|HGNC= | |||
|UniProt=E9QKB6 | |||
|association_with_transcript=-107bp_to_ENSMUST00000094644_5end | |||
|description=CAGE_peak_5_at_Plekhg2_5end | |||
|id=chr7:29157359..29157390,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.27e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.98e-07,23;UBERON:0000974,2.98e-07,23;UBERON:0004807,2.98e-07,23;UBERON:0005058,2.98e-07,23;UBERON:0003351,2.98e-07,23;UBERON:0009113,2.98e-07,23;UBERON:0003295,2.98e-07,23;UBERON:0009722,2.98e-07,23;UBERON:0005562,2.98e-07,23;UBERON:0007690,2.98e-07,23;UBERON:0000072,5.82e-07,27 | |||
|phase1_expression=1.12104192973356,1.39590163055744,2.27499619694768,0.90739263392049,2.00358291978539,0.671517087647559,0.233612640595526,3.87369970324729,0.281577444303333,1.17032263160997,0.171217968225505,0.638177271962691,3.0816131387617,4.89554253546385,0.333109761815663,0.404950534779652,0,4.41647031501533,2.05671650408608,2.12194825899015,0.765389611359628,0.496454756004426,0,1.11994695955385,1.60586496747019,2.8711598205751,1.29228598847722,0.215471232685889,0.950117097281869,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0,0,0,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,1.6366586336825,0.709638518536602,0.917733760808408,3.12956537739216,4.57852828398938,4.61340983742391,5.8328969722285,1.95980990275508,5.75010257459886,1.17447824240415,3.62681071005672,0.672187598284928,1.54355661621568,1.71920063963254,1.54701627683233,1.01158230429799,0,1.26766280701236,3.38844532069132,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,2.09720077362883,3.84218305321555,1.97010263386108,1.4850653216486,1.89292465216244,0.285650984403804,0.441737081903227,1.22490799214954,1.15014565221884,0,0,0.127687338085188,0.153606533256243,0.923204014111357,0.365950574409639,1.04182674111352,0,0,0,0,0,0,0.681535739998656,0.906858721281426,1.44932244350839,0,0,0,0,0,0.280888840263504,1.36344258062446,0.779358013808606,1.06001872353102,3.52108549441701,2.56652954828636,0,0,1.94841936910093,1.52015919285059,0.505524445014783,0.34255163915718,0.776813650941515,0.742210695324124,0.520455980298408,0.304465478312141,0.922461989024234,0.904335843315735,1.05829836422134,0,2.22475470960936,0.722996784599558,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0,0,0,1.00523481690292,0,0,0,0.162241263067758,1.73126918545538,1.24406970610093,0.252722758433675,0,0.910843100738926,1.37941262660084,0.900310649026746,2.26057226753573,0.884474488967262,2.17793324484245,0.937017245597288,0.258703370739016,4.095791865724,2.45837904218165,3.16712023495108,1.09597866213787,0.278047249225598,1.0447564995665,0.411564272815887,1.59227413454795,0,0.257347907114715,0,1.24275463521301,0.938104239924385,1.08037236876609,2.13070262026689,0.787056926989615,0.771335564436891,0.930135779001631,1.3413670069981,0.583826711835847,0.16455984991348,0.32833492815819,0.648550476366846,1.02339991197733,0.219550115291051,0.671032093801859,0.630869845692382,1.54356918568927,1.32167513193519,0.793351699990633,2.13288250535234,1.16118335930219,0.644337306610467,0.80673409849337,0.22237804384487,0.951128130562796,0.949058123089023,1.4822905925161,0.754005626400808,0.397912944082302,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.948339504765408,1.48523066392647,3.38123207019241,1.83286195060783,1.55161989734101,1.19230893813542,1.07502113111237,0.738050739898011,0.156998727841375,0.493588655687202,0,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.763877555344259,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.947457058852424,0.977789858652155,1.01847051465113,0.469380496577004,3.01511263395268,1.19021820443007,0.780534591431195,2.83743259391144,0.8858587585951,2.87018583583477,1.3109065177259,0.863424909329478,1.44649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,0.716906393857656,1.11399337041197,1.98153571552183,2.02405350837447,1.75353514746787,1.18586333383957,0,0.99358059645788,1.95872164033981,2.76907830901079,2.47455184458803,1.32745138339963,0.971122544619926,0,0.377210159511796,0,0,0,1.09060118843252,0.356497378384721,0.316036757935816,0,1.03135543248187,0,2.52085531643834,1.81102157295856,1.07168517515796,1.59606210278046,1.42695054081656,1.48094118541909,0.608929898229199,0.938686832254841,1.69465656691056,0.220528398054962,0.49465875882444,1.45317984026315,1.14594557363496,0.954978752025092,0.328281799490123,1.1659233465194,0.18542530201051,0.854354403989263,1.23832120777933,0.370389054739423,0.565105371014073,0.27338845544205,1.37266903923914,0.339956859987711,0.279902904647316,0.138199973804424,0.954670618015114,1.58167996790568,0.609958401380546,0.756037385752609,1.04544148007234,0.87345025498471,1.34864346384821,0.826534557253359,0.26175594198403,1.29614973291793,0.621339313086926,0,0.747582730219894,0.827292452285488,1.36115831840833,0.516639293910924,0.675824501963113,0.821500670520278,0.911430693907651,1.78260885523708,0.241584120826006,0.864090018773596,4.10814456816632,1.21635129174099,0.821687657318618,1.42912905275575,2.8644271306797,3.17890167650024,2.64429988943931,2.51072196196781,2.82706059854813,2.89585865288999,2.21817607301049,5.55509920216589,4.81059208201647,4.44132228289962,0.226730383615211,0.665957860122194,1.16628013592318,0.83942308182039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| |||
|short_description=p5@Plekhg2 | |||
}} | |||
Revision as of 13:03, 14 September 2013
| Short description: | p5@Plekhg2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Plekhg2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -107bp_to_ENSMUST00000094644_5end |
| EntrezGene: | Plekhg2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| oligodendrocyte precursor cell | 1.27e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| thymus | 2.98e-07 | 23 |
| neck | 2.98e-07 | 23 |
| respiratory system epithelium | 2.98e-07 | 23 |
| hemolymphoid system gland | 2.98e-07 | 23 |
| pharyngeal epithelium | 2.98e-07 | 23 |
| thymic region | 2.98e-07 | 23 |
| pharyngeal gland | 2.98e-07 | 23 |
| entire pharyngeal arch endoderm | 2.98e-07 | 23 |
| thymus primordium | 2.98e-07 | 23 |
| early pharyngeal endoderm | 2.98e-07 | 23 |
| segment of respiratory tract | 5.82e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
