FFCP PHASE1:Mm9::chr7:38376166..38376169,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:38376166..38376169,-|id=chr7:38376166..38376169,-|ontology_enrichment_celltype=CL:0000540!1.40e-24!33;CL:0000047!1.40e-24!33;CL:0000031!1.40e-24!33;CL:0000404!1.40e-24!33;CL:0000107!3.59e-24!9;CL:0000221!6.35e-24!44;CL:0000133!6.35e-24!44;CL:0002319!2.39e-22!43;CL:0000393!4.34e-20!39;CL:0000211!4.34e-20!39;CL:0000055!1.65e-18!50;CL:0002321!4.32e-13!70;CL:0000220!4.32e-13!70;CL:0000630!3.67e-08!3;CL:0002612!7.56e-08!3;CL:0000117!3.66e-07!23;CL:0000337!3.66e-07!23|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!6.42e-29!11;UBERON:0002410!3.59e-24!9;UBERON:0004121!1.43e-13!102;UBERON:0000924!1.43e-13!102;UBERON:0006601!1.43e-13!102;UBERON:0000073!2.62e-13!75;UBERON:0001016!2.62e-13!75;UBERON:0001017!5.20e-11!73;UBERON:0005743!5.20e-11!73;UBERON:0000013!2.80e-09!3;UBERON:0000011!4.53e-09!3;UBERON:0002005!5.11e-09!3;UBERON:0005428!5.11e-09!3;UBERON:0002257!7.56e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0000013,7.89e-34,3;UBERON:0000011,5.97e-33,3;UBERON:0010313,1.73e-15,3;UBERON:0002342,1.73e-15,3;UBERON:0002005,1.73e-15,3;UBERON:0005428,1.73e-15,3;UBERON:0005062,1.73e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78609863299508,0.780877488593277,2.36965737506079,2.15071918157297,4.45597348164788,1.69845918473299,4.45291771842384,4.9683495844923,2.37172666767914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr7:38376166..38376169,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:38376166..38376169,- | |||
|id=chr7:38376166..38376169,- | |||
|ontology_enrichment_celltype=CL:0000540!1.40e-24!33;CL:0000047!1.40e-24!33;CL:0000031!1.40e-24!33;CL:0000404!1.40e-24!33;CL:0000107!3.59e-24!9;CL:0000221!6.35e-24!44;CL:0000133!6.35e-24!44;CL:0002319!2.39e-22!43;CL:0000393!4.34e-20!39;CL:0000211!4.34e-20!39;CL:0000055!1.65e-18!50;CL:0002321!4.32e-13!70;CL:0000220!4.32e-13!70;CL:0000630!3.67e-08!3;CL:0002612!7.56e-08!3;CL:0000117!3.66e-07!23;CL:0000337!3.66e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.42e-29!11;UBERON:0002410!3.59e-24!9;UBERON:0004121!1.43e-13!102;UBERON:0000924!1.43e-13!102;UBERON:0006601!1.43e-13!102;UBERON:0000073!2.62e-13!75;UBERON:0001016!2.62e-13!75;UBERON:0001017!5.20e-11!73;UBERON:0005743!5.20e-11!73;UBERON:0000013!2.80e-09!3;UBERON:0000011!4.53e-09!3;UBERON:0002005!5.11e-09!3;UBERON:0005428!5.11e-09!3;UBERON:0002257!7.56e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0000013,7.89e-34,3;UBERON:0000011,5.97e-33,3;UBERON:0010313,1.73e-15,3;UBERON:0002342,1.73e-15,3;UBERON:0002005,1.73e-15,3;UBERON:0005428,1.73e-15,3;UBERON:0005062,1.73e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78609863299508,0.780877488593277,2.36965737506079,2.15071918157297,4.45597348164788,1.69845918473299,4.45291771842384,4.9683495844923,2.37172666767914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:38376166..38376169,- | |||
}} |
Revision as of 13:25, 14 September 2013
Short description: | p@chr7:38376166..38376169, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:38376166..38376169, - |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.97e-77 | 9 |
neuron | 3.59e-21 | 33 |
neuronal stem cell | 3.59e-21 | 33 |
neuroblast | 3.59e-21 | 33 |
electrically signaling cell | 3.59e-21 | 33 |
electrically responsive cell | 6.32e-18 | 39 |
electrically active cell | 6.32e-18 | 39 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
embryonic cell | 5.63e-10 | 70 |
somatic stem cell | 1.22e-07 | 91 |
multi fate stem cell | 1.22e-07 | 91 |
stem cell | 3.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.97e-77 | 9 |
peripheral nervous system | 4.29e-63 | 11 |
sympathetic nervous system | 7.89e-34 | 3 |
parasympathetic nervous system | 5.97e-33 | 3 |
neural crest-derived structure | 1.73e-15 | 3 |
neural crest | 1.73e-15 | 3 |
enteric nervous system | 1.73e-15 | 3 |
vagal neural crest | 1.73e-15 | 3 |
neural fold | 1.73e-15 | 3 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.