FFCP PHASE1:Mm9::chr8:26707568..26707599,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=6|UniProt=|association_with_transcript=84bp_to_ENSMUST00000059474_5end|description=CAGE_peak_1_at_ENSMUST00000059474_5end|id=chr8:26707568..26707599,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002320,2.87e-08,46;CL:0000134,2.87e-08,46;CL:0000223,4.45e-08,20;CL:0000988,8.04e-07,32;CL:0002032,8.04e-07,32;CL:0000037,8.04e-07,32;CL:0000837,8.04e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!1.31e-10!69;UBERON:0003104!1.18e-09!131;UBERON:0009142!1.18e-09!131;UBERON:0000490!5.46e-09!66;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0000077!3.45e-08!97;UBERON:0001007!4.26e-08!128;UBERON:0001555!4.26e-08!128;UBERON:0007026!4.26e-08!128;UBERON:0004921!6.36e-08!126;UBERON:0004185!6.36e-08!126;UBERON:0003929!7.03e-08!55;UBERON:0001041!8.67e-08!92;UBERON:0000926!1.32e-07!193;UBERON:0004120!1.32e-07!193;UBERON:0006603!1.32e-07!193;UBERON:0005256!2.56e-07!47;UBERON:0000466!6.26e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.94e-11,69;UBERON:0002384,2.87e-08,46;UBERON:0000490,4.26e-08,66;UBERON:0003929,7.97e-08,55|phase1_expression=0.640595388419176,1.39590163055744,0.909998478779072,1.20985684522732,1.50268718983904,1.34303417529512,0.934450562382103,3.87369970324729,0.422366166455,1.17032263160997,0,0.159544317990673,6.16322627752341,3.2345548895029,0.666219523631325,0.809901069559304,0,0.473193248037357,1.91960207048034,1.69755860719212,0.510259740906419,0.794327609607082,0.261199789138935,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,1.14014051673824,0.504060259519861,0.886922042621219,0.635030673459631,2.46025915033828,0,2.59966457776147,1.16364251750945,1.83752420636132,15.9042019680025,8.5946887897618,7.32933241563318,38.2350467220159,10.2456822743767,12.1377588257788,0.503587271902309,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,3.85899993932794,5.07753499407941,8.73843877770406,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0.294628585473668,0,0,0.075726193333184,0.226714680320357,1.73918693221007,0,2.03991400112325,1.07940638327563,1.29955283489534,2.68816132258401,0.421333260395256,0.340860645156116,1.29893002301434,0,0.14084341977668,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,0.91347103775248,0.517875767294343,0.29688427812965,0.867426633830679,0.304465478312141,0.691846491768175,0.301445281105245,0.823120949949934,0.376999773989026,3.46072954828123,1.15679485535929,2.65383165584962,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,4.79922184794726,1.52484272487678,0,0,0,0,0.767146371990992,0,0.486723789203273,0.305518091550949,1.24406970610093,0.758168275301024,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0.939444931322602,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.49095073923223,0.126473074248515,0,0.156998727841375,0.616985819609003,0.592905254174298,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,1.01850340712568,1.43848068725405,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,1.5601883655728,2.02063102357689,0.538192240565737,0.964887042726734,1.47802552133284,0,0.488894929326078,0,0.469380496577004,1.17254380209271,1.19021820443007,2.53673742215138,1.10344600874334,0.8858587585951,0.956728611944923,1.63863314715738,1.55416483679306,1.44649058581512,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0.117211686592203,0,1.26235463602186,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0,0.292255857911312,0,0,1.27746076687442,0.178065603667255,0.81443479676788,0.329940245945071,2.65490276679926,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0.516856586336442,1.09060118843252,0,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.493647061806363,0.913394847343798,0.23467170806371,1.0591603543191,0.220528398054962,0.98931751764888,0.645857706783622,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0.185194527369712,0.376736914009382,0.4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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt= | |||
|association_with_transcript=84bp_to_ENSMUST00000059474_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000059474_5end | |||
|id=chr8:26707568..26707599,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.87e-08,46;CL:0000134,2.87e-08,46;CL:0000223,4.45e-08,20;CL:0000988,8.04e-07,32;CL:0002032,8.04e-07,32;CL:0000037,8.04e-07,32;CL:0000837,8.04e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.31e-10!69;UBERON:0003104!1.18e-09!131;UBERON:0009142!1.18e-09!131;UBERON:0000490!5.46e-09!66;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0000077!3.45e-08!97;UBERON:0001007!4.26e-08!128;UBERON:0001555!4.26e-08!128;UBERON:0007026!4.26e-08!128;UBERON:0004921!6.36e-08!126;UBERON:0004185!6.36e-08!126;UBERON:0003929!7.03e-08!55;UBERON:0001041!8.67e-08!92;UBERON:0000926!1.32e-07!193;UBERON:0004120!1.32e-07!193;UBERON:0006603!1.32e-07!193;UBERON:0005256!2.56e-07!47;UBERON:0000466!6.26e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.94e-11,69;UBERON:0002384,2.87e-08,46;UBERON:0000490,4.26e-08,66;UBERON:0003929,7.97e-08,55 | |||
|phase1_expression=0.640595388419176,1.39590163055744,0.909998478779072,1.20985684522732,1.50268718983904,1.34303417529512,0.934450562382103,3.87369970324729,0.422366166455,1.17032263160997,0,0.159544317990673,6.16322627752341,3.2345548895029,0.666219523631325,0.809901069559304,0,0.473193248037357,1.91960207048034,1.69755860719212,0.510259740906419,0.794327609607082,0.261199789138935,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,1.14014051673824,0.504060259519861,0.886922042621219,0.635030673459631,2.46025915033828,0,2.59966457776147,1.16364251750945,1.83752420636132,15.9042019680025,8.5946887897618,7.32933241563318,38.2350467220159,10.2456822743767,12.1377588257788,0.503587271902309,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,3.85899993932794,5.07753499407941,8.73843877770406,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0.294628585473668,0,0,0.075726193333184,0.226714680320357,1.73918693221007,0,2.03991400112325,1.07940638327563,1.29955283489534,2.68816132258401,0.421333260395256,0.340860645156116,1.29893002301434,0,0.14084341977668,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,0.91347103775248,0.517875767294343,0.29688427812965,0.867426633830679,0.304465478312141,0.691846491768175,0.301445281105245,0.823120949949934,0.376999773989026,3.46072954828123,1.15679485535929,2.65383165584962,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,4.79922184794726,1.52484272487678,0,0,0,0,0.767146371990992,0,0.486723789203273,0.305518091550949,1.24406970610093,0.758168275301024,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0.939444931322602,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.49095073923223,0.126473074248515,0,0.156998727841375,0.616985819609003,0.592905254174298,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,1.01850340712568,1.43848068725405,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,1.5601883655728,2.02063102357689,0.538192240565737,0.964887042726734,1.47802552133284,0,0.488894929326078,0,0.469380496577004,1.17254380209271,1.19021820443007,2.53673742215138,1.10344600874334,0.8858587585951,0.956728611944923,1.63863314715738,1.55416483679306,1.44649058581512,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0.117211686592203,0,1.26235463602186,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0,0.292255857911312,0,0,1.27746076687442,0.178065603667255,0.81443479676788,0.329940245945071,2.65490276679926,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0.516856586336442,1.09060118843252,0,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.493647061806363,0.913394847343798,0.23467170806371,1.0591603543191,0.220528398054962,0.98931751764888,0.645857706783622,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0.185194527369712,0.376736914009382,0.410082683163076,0.686334519619568,1.01987057996313,1.39951452323658,0.967399816630967,0,0,0.406638934253697,0,0.418176592028937,0.218362563746178,0.404593039154462,0.495920734352016,1.04702376793612,0.648074866458964,1.24267862617385,0,0.299033092087958,0,0.194451188344048,0.258319646955462,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0.537080087002444,0.198681354781265,1.08175904567972,0.147689527174577,1.11063094942962,0.914481679859998,0.604957110821043,0.38983152295901,1.44317762460494,1.05189211963412,0.906921534460845,0,0,0.167884616364078,1.35232715822533,0.187682475451182,1.28206136987086,0.428736758158132,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0,0,0.233931608445408,0.859484216193193,0.382576664137687,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000059474 | |||
}} |
Revision as of 15:25, 14 September 2013
Short description: | p1@ENSMUST00000059474 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000059474_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 84bp_to_ENSMUST00000059474_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.87e-08 | 46 |
mesenchymal cell | 2.87e-08 | 46 |
endodermal cell | 4.45e-08 | 20 |
hematopoietic cell | 8.04e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.04e-07 | 32 |
hematopoietic stem cell | 8.04e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.04e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.94e-11 | 69 |
connective tissue | 2.87e-08 | 46 |
unilaminar epithelium | 4.26e-08 | 66 |
gut epithelium | 7.97e-08 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.