FFCP PHASE1:Mm9::chr8:85982251..85982264,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100505320,56367|HGNC=|MCL_coexpression_id=727|UniProt=Q78YZ6|association_with_transcript=25bp_to_ENSMUST00000081506,NM_001039137,uc009mkh.1_5end|description=CAGE_peak_2_at_LOC100505320_5end,CAGE_peak_2_at_Scoc_5end|id=chr8:85982251..85982264,-|ontology_enrichment_celltype=CL:0002563!2.85e-07!9;CL:0002251!2.85e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,6.87e-10,9;CL:0002251,6.87e-10,9;CL:0000075,5.15e-08,7;CL:0000239,3.18e-07,6;CL:0000677,3.18e-07,6;CL:0000584,3.18e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.67e-13!43;UBERON:0005409!1.91e-12!59;UBERON:0000344!1.22e-11!15;UBERON:0001242!5.66e-10!13;UBERON:0000060!5.66e-10!13;UBERON:0001262!5.66e-10!13;UBERON:0004786!5.66e-10!13;UBERON:0002113!1.28e-08!14;UBERON:0003918!1.28e-08!14;UBERON:0005095!1.28e-08!14;UBERON:0007687!1.28e-08!14;UBERON:0000485!1.67e-08!11;UBERON:0006554!3.11e-08!16;UBERON:0001008!1.87e-07!17;UBERON:0003350!2.85e-07!9;UBERON:0004808!2.85e-07!9;UBERON:0001277!2.85e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.24e-31,31;UBERON:0005409,2.99e-27,47;UBERON:0000344,3.00e-16,15;UBERON:0001242,8.07e-14,13;UBERON:0001262,8.07e-14,13;UBERON:0004786,8.07e-14,13;UBERON:0000485,1.11e-11,11;UBERON:0002113,8.97e-11,14;UBERON:0003918,8.97e-11,14;UBERON:0011143,8.97e-11,14;UBERON:0005095,8.97e-11,14;UBERON:0007687,8.97e-11,14;UBERON:0003350,6.87e-10,9;UBERON:0004808,6.87e-10,9;UBERON:0001277,6.87e-10,9;UBERON:0006554,5.40e-09,18;UBERON:0001007,6.61e-09,116;UBERON:0001555,6.61e-09,116;UBERON:0007026,6.61e-09,116;UBERON:0004119,1.47e-08,118;UBERON:0000925,1.47e-08,118;UBERON:0006595,1.47e-08,118;UBERON:0004923,1.64e-08,24;UBERON:0001008,2.45e-08,19;UBERON:0004921,9.80e-08,114|phase1_expression=8.0074423552397,10.1202868215415,8.18998630901165,8.77146212789807,7.01254021924886,2.51818907867835,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,29.7585906395736,18.1233332043064,14.3557991028755,18.0920038386811,9.48073423817912,3.80046838912748,3.02436155711917,4.6563407237614,0,0,0,2.88851619751275,7.31432439577366,4.69589519403449,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,2.95771181531029,0,0,0,0,0,0,9.1347103775248,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,30.654846625031,0,0,0,0.149790639404823,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0,1.01839363850316,0.622034853050465,6.82351447770922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.880812665778,17.7181879664575,0,0,4.76809606891745,13.9161631990106,15.5664630691409,18.6421113590308,53.6217839545298,18.2815839743652,20.6094871216221,24.8695590051439,28.0748285451533,51.2327062932906,46.2535426731846,42.2179499299258,1.32767530667157,1.25673363870702,5.63538678365402,8.96065842519383,9.11576689687841,8.6968416663995,22.2592610677386,33.9503340353085,50.0825941813986,40.5976669302724,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,1.01847051465113,2.58159273117352,3.1826188913945,1.42826184531608,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0,0,1.50791283939272,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,3.6179961043551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,49.8432230637045,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.406638934253697,1.40406943068342,1.04544148007234,2.18362563746178,2.15782954215713,1.48776220305605,4.4498510137285,0,0,0,0,0,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,1.23621034343337,1.92551525755089,1.01078884705519,1.2673964994512,0.943131706930381,0.655490552289177,0.768301828858431,0.746661096422973,0.476293691283074,0.927074607558844,0.38581844092741,0.824171801606613,1.32479028120958,0.342869252385415,2.30718548007139,1.43061713968393,0.726732083161643,1.2234219453993,0.761531471025089,1.82927972872773,0.789209134313529,0.814824683075171,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,0.929621047115796,0.964533054905707,0,1.63752125911786,1.28922632428979,0,0,0|short_description=p2@LOC100505320,p2@Scoc}} | ||
|EntrezGene=100505320,56367 | |||
|HGNC= | |||
|MCL_coexpression_id=727 | |||
|UniProt=Q78YZ6 | |||
|association_with_transcript=25bp_to_ENSMUST00000081506,NM_001039137,uc009mkh.1_5end | |||
|description=CAGE_peak_2_at_LOC100505320_5end,CAGE_peak_2_at_Scoc_5end | |||
|id=chr8:85982251..85982264,- | |||
|ontology_enrichment_celltype=CL:0002563!2.85e-07!9;CL:0002251!2.85e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.87e-10,9;CL:0002251,6.87e-10,9;CL:0000075,5.15e-08,7;CL:0000239,3.18e-07,6;CL:0000677,3.18e-07,6;CL:0000584,3.18e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.67e-13!43;UBERON:0005409!1.91e-12!59;UBERON:0000344!1.22e-11!15;UBERON:0001242!5.66e-10!13;UBERON:0000060!5.66e-10!13;UBERON:0001262!5.66e-10!13;UBERON:0004786!5.66e-10!13;UBERON:0002113!1.28e-08!14;UBERON:0003918!1.28e-08!14;UBERON:0005095!1.28e-08!14;UBERON:0007687!1.28e-08!14;UBERON:0000485!1.67e-08!11;UBERON:0006554!3.11e-08!16;UBERON:0001008!1.87e-07!17;UBERON:0003350!2.85e-07!9;UBERON:0004808!2.85e-07!9;UBERON:0001277!2.85e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.24e-31,31;UBERON:0005409,2.99e-27,47;UBERON:0000344,3.00e-16,15;UBERON:0001242,8.07e-14,13;UBERON:0001262,8.07e-14,13;UBERON:0004786,8.07e-14,13;UBERON:0000485,1.11e-11,11;UBERON:0002113,8.97e-11,14;UBERON:0003918,8.97e-11,14;UBERON:0011143,8.97e-11,14;UBERON:0005095,8.97e-11,14;UBERON:0007687,8.97e-11,14;UBERON:0003350,6.87e-10,9;UBERON:0004808,6.87e-10,9;UBERON:0001277,6.87e-10,9;UBERON:0006554,5.40e-09,18;UBERON:0001007,6.61e-09,116;UBERON:0001555,6.61e-09,116;UBERON:0007026,6.61e-09,116;UBERON:0004119,1.47e-08,118;UBERON:0000925,1.47e-08,118;UBERON:0006595,1.47e-08,118;UBERON:0004923,1.64e-08,24;UBERON:0001008,2.45e-08,19;UBERON:0004921,9.80e-08,114 | |||
|phase1_expression=8.0074423552397,10.1202868215415,8.18998630901165,8.77146212789807,7.01254021924886,2.51818907867835,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,29.7585906395736,18.1233332043064,14.3557991028755,18.0920038386811,9.48073423817912,3.80046838912748,3.02436155711917,4.6563407237614,0,0,0,2.88851619751275,7.31432439577366,4.69589519403449,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,2.95771181531029,0,0,0,0,0,0,9.1347103775248,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,30.654846625031,0,0,0,0.149790639404823,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0,1.01839363850316,0.622034853050465,6.82351447770922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.880812665778,17.7181879664575,0,0,4.76809606891745,13.9161631990106,15.5664630691409,18.6421113590308,53.6217839545298,18.2815839743652,20.6094871216221,24.8695590051439,28.0748285451533,51.2327062932906,46.2535426731846,42.2179499299258,1.32767530667157,1.25673363870702,5.63538678365402,8.96065842519383,9.11576689687841,8.6968416663995,22.2592610677386,33.9503340353085,50.0825941813986,40.5976669302724,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,1.01847051465113,2.58159273117352,3.1826188913945,1.42826184531608,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0,0,1.50791283939272,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,3.6179961043551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,49.8432230637045,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.406638934253697,1.40406943068342,1.04544148007234,2.18362563746178,2.15782954215713,1.48776220305605,4.4498510137285,0,0,0,0,0,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,1.23621034343337,1.92551525755089,1.01078884705519,1.2673964994512,0.943131706930381,0.655490552289177,0.768301828858431,0.746661096422973,0.476293691283074,0.927074607558844,0.38581844092741,0.824171801606613,1.32479028120958,0.342869252385415,2.30718548007139,1.43061713968393,0.726732083161643,1.2234219453993,0.761531471025089,1.82927972872773,0.789209134313529,0.814824683075171,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,0.929621047115796,0.964533054905707,0,1.63752125911786,1.28922632428979,0,0,0 | |||
|short_description=p2@LOC100505320,p2@Scoc | |||
}} |
Revision as of 16:12, 14 September 2013
Short description: | p2@LOC100505320, p2@Scoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100505320_5end, CAGE_peak_2_at_Scoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:727 |
Association with transcript: | 25bp_to_ENSMUST00000081506, NM_001039137, uc009mkh.1_5end |
EntrezGene: | 100505320,56367 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.87e-10 | 9 |
epithelial cell of alimentary canal | 6.87e-10 | 9 |
columnar/cuboidal epithelial cell | 5.15e-08 | 7 |
brush border epithelial cell | 3.18e-07 | 6 |
gut absorptive cell | 3.18e-07 | 6 |
enterocyte | 3.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.24e-31 | 31 |
gastrointestinal system | 2.99e-27 | 47 |
mucosa | 3.00e-16 | 15 |
intestinal mucosa | 8.07e-14 | 13 |
wall of intestine | 8.07e-14 | 13 |
gastrointestinal system mucosa | 8.07e-14 | 13 |
simple columnar epithelium | 1.11e-11 | 11 |
kidney | 8.97e-11 | 14 |
kidney mesenchyme | 8.97e-11 | 14 |
upper urinary tract | 8.97e-11 | 14 |
kidney rudiment | 8.97e-11 | 14 |
kidney field | 8.97e-11 | 14 |
epithelium of mucosa | 6.87e-10 | 9 |
gastrointestinal system epithelium | 6.87e-10 | 9 |
intestinal epithelium | 6.87e-10 | 9 |
urinary system structure | 5.40e-09 | 18 |
digestive system | 6.61e-09 | 116 |
digestive tract | 6.61e-09 | 116 |
primitive gut | 6.61e-09 | 116 |
endoderm-derived structure | 1.47e-08 | 118 |
endoderm | 1.47e-08 | 118 |
presumptive endoderm | 1.47e-08 | 118 |
organ component layer | 1.64e-08 | 24 |
renal system | 2.45e-08 | 19 |
subdivision of digestive tract | 9.80e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.