FFCP PHASE1:Mm9::chr8:86262303..86262320,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:86262303..86262320,+|id=chr8:86262303..86262320,+|ontology_enrichment_celltype=CL:0000049!5.60e-12!19;CL:0000553!4.45e-11!6;CL:0000556!4.45e-11!6;CL:0000988!7.75e-11!32;CL:0002032!7.75e-11!32;CL:0000037!7.75e-11!32;CL:0000566!7.75e-11!32;CL:0000837!7.75e-11!32;CL:0002320!6.36e-08!46;CL:0000134!6.36e-08!46;CL:0000050!3.04e-07!9;CL:0000763!3.51e-07!16|ontology_enrichment_celltype_v019_2=CL:0000553,4.04e-11,6;CL:0000556,4.04e-11,6;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1;CL:0000050,1.38e-07,9;CL:0000355,1.87e-07,9|ontology_enrichment_disease=DOID:0060100!4.81e-09!3;DOID:4045!4.81e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.34e-21,3;DOID:4045,3.34e-21,3;DOID:0050686,6.44e-11,6|ontology_enrichment_uberon=UBERON:0002384!6.36e-08!46;UBERON:0002371!3.51e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.56e-07,32;UBERON:0001134,1.87e-07,9;UBERON:0002036,1.87e-07,9;UBERON:0002385,1.87e-07,9;UBERON:0000486,1.87e-07,9;UBERON:0007503,1.87e-07,9;UBERON:0001015,1.87e-07,9;UBERON:0002329,1.87e-07,9;UBERON:0003082,1.87e-07,9;UBERON:0003059,1.87e-07,9;UBERON:0007282,1.87e-07,9;UBERON:0004290,1.87e-07,9;UBERON:0009618,1.87e-07,9;UBERON:0000383,9.31e-07,10|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,4.88966356305268,4.2505474417779,3.39511721438424,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.1253413780952,4.71171369576418,44.7055930903571,2.04913645487534,3.88408282424923,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,1.39951452323658,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr8:86262303..86262320,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86262303..86262320,+ | |||
|id=chr8:86262303..86262320,+ | |||
|ontology_enrichment_celltype=CL:0000049!5.60e-12!19;CL:0000553!4.45e-11!6;CL:0000556!4.45e-11!6;CL:0000988!7.75e-11!32;CL:0002032!7.75e-11!32;CL:0000037!7.75e-11!32;CL:0000566!7.75e-11!32;CL:0000837!7.75e-11!32;CL:0002320!6.36e-08!46;CL:0000134!6.36e-08!46;CL:0000050!3.04e-07!9;CL:0000763!3.51e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.04e-11,6;CL:0000556,4.04e-11,6;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1;CL:0000050,1.38e-07,9;CL:0000355,1.87e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.81e-09!3;DOID:4045!4.81e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.34e-21,3;DOID:4045,3.34e-21,3;DOID:0050686,6.44e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.36e-08!46;UBERON:0002371!3.51e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.56e-07,32;UBERON:0001134,1.87e-07,9;UBERON:0002036,1.87e-07,9;UBERON:0002385,1.87e-07,9;UBERON:0000486,1.87e-07,9;UBERON:0007503,1.87e-07,9;UBERON:0001015,1.87e-07,9;UBERON:0002329,1.87e-07,9;UBERON:0003082,1.87e-07,9;UBERON:0003059,1.87e-07,9;UBERON:0007282,1.87e-07,9;UBERON:0004290,1.87e-07,9;UBERON:0009618,1.87e-07,9;UBERON:0000383,9.31e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,4.88966356305268,4.2505474417779,3.39511721438424,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.1253413780952,4.71171369576418,44.7055930903571,2.04913645487534,3.88408282424923,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,1.39951452323658,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr8:86262303..86262320,+ | |||
}} |
Revision as of 16:13, 14 September 2013
Short description: | p@chr8:86262303..86262320, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86262303..86262320, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.04e-11 | 6 |
megakaryocyte | 4.04e-11 | 6 |
lymphocyte of B lineage | 5.62e-08 | 1 |
B cell | 5.62e-08 | 1 |
pro-B cell | 5.62e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 1.38e-07 | 9 |
multi-potent skeletal muscle stem cell | 1.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.56e-07 | 32 |
skeletal muscle tissue | 1.87e-07 | 9 |
striated muscle tissue | 1.87e-07 | 9 |
muscle tissue | 1.87e-07 | 9 |
multilaminar epithelium | 1.87e-07 | 9 |
epithelial vesicle | 1.87e-07 | 9 |
musculature | 1.87e-07 | 9 |
somite | 1.87e-07 | 9 |
myotome | 1.87e-07 | 9 |
presomitic mesoderm | 1.87e-07 | 9 |
presumptive segmental plate | 1.87e-07 | 9 |
dermomyotome | 1.87e-07 | 9 |
trunk paraxial mesoderm | 1.87e-07 | 9 |
musculature of body | 9.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.34e-21 | 3 |
muscle cancer | 3.34e-21 | 3 |
organ system cancer | 6.44e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.