FFCP PHASE1:Mm9::chr8:87490682..87490709,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=83|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:87490682..87490709,+|id=chr8:87490682..87490709,+|ontology_enrichment_celltype=CL:0000128!2.15e-09!6;CL:0000126!2.15e-09!6;CL:0000127!2.15e-09!6;CL:0000333!1.27e-07!10;CL:0000095!1.27e-07!10;CL:0000243!1.27e-07!10;CL:0000123!1.27e-07!10;CL:0000125!1.27e-07!10;CL:0000030!1.27e-07!10;CL:0000339!1.27e-07!10;CL:0002453!6.14e-07!8|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!2.42e-17!7;UBERON:0006858!2.42e-17!7;UBERON:0002342!9.42e-12!10;UBERON:0005062!9.42e-12!10;UBERON:0003064!4.97e-08!14;UBERON:0005631!8.08e-08!3;UBERON:0000478!8.08e-08!3;UBERON:0000158!8.08e-08!3;UBERON:0003134!8.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.96e-56,7;UBERON:0006858,3.96e-56,7;UBERON:0003064,5.20e-28,14;UBERON:0005256,5.19e-11,45;UBERON:0003104,5.69e-08,61;UBERON:0009142,5.69e-08,61;UBERON:0005172,9.29e-08,49;UBERON:0005173,9.29e-08,49;UBERON:0002417,9.29e-08,49;UBERON:0000916,9.29e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,1.80081605225163,0,0.515672092277442,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22663208597237,1.73485326766136,11.8741536541735,12.2226213545711,15.8258772580254,6.58496759959947,3.26733137457156,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,3.52007562095566,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.50695859978048,0,0,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr8:87490682..87490709,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=83 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:87490682..87490709,+ | |||
|id=chr8:87490682..87490709,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.15e-09!6;CL:0000126!2.15e-09!6;CL:0000127!2.15e-09!6;CL:0000333!1.27e-07!10;CL:0000095!1.27e-07!10;CL:0000243!1.27e-07!10;CL:0000123!1.27e-07!10;CL:0000125!1.27e-07!10;CL:0000030!1.27e-07!10;CL:0000339!1.27e-07!10;CL:0002453!6.14e-07!8 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!2.42e-17!7;UBERON:0006858!2.42e-17!7;UBERON:0002342!9.42e-12!10;UBERON:0005062!9.42e-12!10;UBERON:0003064!4.97e-08!14;UBERON:0005631!8.08e-08!3;UBERON:0000478!8.08e-08!3;UBERON:0000158!8.08e-08!3;UBERON:0003134!8.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.96e-56,7;UBERON:0006858,3.96e-56,7;UBERON:0003064,5.20e-28,14;UBERON:0005256,5.19e-11,45;UBERON:0003104,5.69e-08,61;UBERON:0009142,5.69e-08,61;UBERON:0005172,9.29e-08,49;UBERON:0005173,9.29e-08,49;UBERON:0002417,9.29e-08,49;UBERON:0000916,9.29e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,1.80081605225163,0,0.515672092277442,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22663208597237,1.73485326766136,11.8741536541735,12.2226213545711,15.8258772580254,6.58496759959947,3.26733137457156,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,3.52007562095566,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.50695859978048,0,0,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr8:87490682..87490709,+ | |||
}} |
Revision as of 16:19, 14 September 2013
Short description: | p@chr8:87490682..87490709, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87490682..87490709, + |
Coexpression cluster: | MCL_coexpression_mm9:83 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 3.96e-56 | 7 |
adrenal/interrenal gland | 3.96e-56 | 7 |
intermediate mesoderm | 5.20e-28 | 14 |
trunk mesenchyme | 5.19e-11 | 45 |
mesenchyme | 5.69e-08 | 61 |
entire embryonic mesenchyme | 5.69e-08 | 61 |
abdomen element | 9.29e-08 | 49 |
abdominal segment element | 9.29e-08 | 49 |
abdominal segment of trunk | 9.29e-08 | 49 |
abdomen | 9.29e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.