FFCP PHASE1:Mm9::chr8:96910078..96910106,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64209|HGNC=|MCL_coexpression_id=0|UniProt=Q9JJK5|association_with_transcript=-231bp_to_ENSMUST00000161576_5end|description=CAGE_peak_4_at_Herpud1_5end|id=chr8:96910078..96910106,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!2.90e-09!3;UBERON:0006555!2.90e-09!3;UBERON:0005103!2.90e-09!3;UBERON:0000083!2.90e-09!3;UBERON:0009201!2.90e-09!3;UBERON:0004819!2.90e-09!3;UBERON:0006553!2.90e-09!3;UBERON:0003074!2.90e-09!3;UBERON:0003060!2.90e-09!3;UBERON:0002113!2.65e-07!14;UBERON:0003918!2.65e-07!14;UBERON:0005095!2.65e-07!14;UBERON:0007687!2.65e-07!14;UBERON:0000080!3.67e-07!4;UBERON:0005904!3.67e-07!4;UBERON:0006947!3.67e-07!4;UBERON:0002120!3.67e-07!4;UBERON:0004054!3.67e-07!4;UBERON:0004875!3.67e-07!4;UBERON:0004876!3.67e-07!4;UBERON:0005721!3.67e-07!4;UBERON:0005754!3.67e-07!4;UBERON:0007297!3.67e-07!4;UBERON:0003135!3.79e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1607143746326,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.16266542671934,0,0,0,0,0,0,0,0,0,0,9.24889425724386,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,598.64190088261,0,0,0,0,0,0,0,0,0,106.283072309152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Herpud1}} | ||
|EntrezGene=64209 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9JJK5 | |||
|association_with_transcript=-231bp_to_ENSMUST00000161576_5end | |||
|description=CAGE_peak_4_at_Herpud1_5end | |||
|id=chr8:96910078..96910106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.90e-09!3;UBERON:0006555!2.90e-09!3;UBERON:0005103!2.90e-09!3;UBERON:0000083!2.90e-09!3;UBERON:0009201!2.90e-09!3;UBERON:0004819!2.90e-09!3;UBERON:0006553!2.90e-09!3;UBERON:0003074!2.90e-09!3;UBERON:0003060!2.90e-09!3;UBERON:0002113!2.65e-07!14;UBERON:0003918!2.65e-07!14;UBERON:0005095!2.65e-07!14;UBERON:0007687!2.65e-07!14;UBERON:0000080!3.67e-07!4;UBERON:0005904!3.67e-07!4;UBERON:0006947!3.67e-07!4;UBERON:0002120!3.67e-07!4;UBERON:0004054!3.67e-07!4;UBERON:0004875!3.67e-07!4;UBERON:0004876!3.67e-07!4;UBERON:0005721!3.67e-07!4;UBERON:0005754!3.67e-07!4;UBERON:0007297!3.67e-07!4;UBERON:0003135!3.79e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1607143746326,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.16266542671934,0,0,0,0,0,0,0,0,0,0,9.24889425724386,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,598.64190088261,0,0,0,0,0,0,0,0,0,106.283072309152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Herpud1 | |||
}} |
Revision as of 16:31, 14 September 2013
Short description: | p4@Herpud1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Herpud1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -231bp_to_ENSMUST00000161576_5end |
EntrezGene: | Herpud1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.62e-09 | 15 |
male organism | 5.75e-09 | 16 |
male reproductive system | 5.75e-09 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.