FFCP PHASE1:Mm9::chr9:107509004..107509019,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20347|HGNC=|UniProt=|association_with_transcript=-17bp_to_ENSMUST00000073448,uc009rmh.1_5end|description=CAGE_peak_5_at_Sema3b_5end|id=chr9:107509004..107509019,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,0.697950815278722,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.304130793658544,0.183546752161682,3.9119567217402,2.18025156380447,1.97717564461025,2.91644848611425,0.839918529752175,4.31257693094915,0,0,0,0,0,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0.186399445825301,1.96888102666279,0.604572480854284,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0,0.461230994512117,0,0,0,2.47194967734374,0.289198713839823,0,3.07357014900077,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.746441823660558,1.0108910337347,0,0,0.689706313300419,0.360124259610698,0.90422890701429,0.884474488967262,0.768682321709099,0.468508622798644,0.258703370739016,0.646703978798527,0,0.527853372491847,0.657587197282725,1.11218899690239,2.43776516565517,2.46938563689532,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0,0.329119699826961,1.31333971263276,0.972825714550269,1.16959989940266,3.07370161407471,2.81833479396781,0,0.205809224758569,0.660837565967596,6.08236303326152,0,0.232236671860439,1.28867461322093,5.64713868945359,6.67134131534611,7.22857379227725,0.474529061544512,0.658795818896044,1.75934646160189,1.39269530428806,2.53453313254856,1.79763881730844,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0,0.581857461502877,0.350679099451593,1.45444035385792,1.32849133181642,1.8839847340965,1.48076596706161,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.502518772325447,1.19021820443007,0.195133647857799,0.788175720530955,0.8858587585951,1.2756381492599,1.47476983244164,1.20879487306127,1.3018415272336,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,1.00988370881749,1.57754109708128,0.390438744296638,0.215423397732799,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0.63549621259146,0.882113592219848,0,0.322928853391811,0.301564624640779,0.358117032009409,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0,0.432021363287205,0,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,1.42576470620972,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,2.31827512838629,1.12609485270709,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,1.70174701947806,0.628839487883947,0,2.44471400581777,1.03017528619447,0.64183841918363,0.758091635291392,1.77435509923168,1.50901073108861,1.40462261204824,1.98477972455095,1.66562859971278,0.476293691283074,1.15884325944855,1.92909220463705,1.64834360321323,1.17759136107518,1.71434626192708,1.77475806159337,2.86123427936785,1.16277133305863,1.69396884747595,1.4384483341585,2.0122077016005,0.789209134313529,1.90125759384206,1.68342681497322,1.54225523561426,2.9551344712669,0.409231043169689,1.54936841185966,1.35034627686799,0.749431733813838,1.16965804222704,1.50409737833809,1.53030665655075,2.8676884485537,1.39120701372253|short_description=p5@Sema3b}} | ||
|EntrezGene=20347 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENSMUST00000073448,uc009rmh.1_5end | |||
|description=CAGE_peak_5_at_Sema3b_5end | |||
|id=chr9:107509004..107509019,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,0.697950815278722,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.304130793658544,0.183546752161682,3.9119567217402,2.18025156380447,1.97717564461025,2.91644848611425,0.839918529752175,4.31257693094915,0,0,0,0,0,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0.186399445825301,1.96888102666279,0.604572480854284,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0,0.461230994512117,0,0,0,2.47194967734374,0.289198713839823,0,3.07357014900077,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0.746441823660558,1.0108910337347,0,0,0.689706313300419,0.360124259610698,0.90422890701429,0.884474488967262,0.768682321709099,0.468508622798644,0.258703370739016,0.646703978798527,0,0.527853372491847,0.657587197282725,1.11218899690239,2.43776516565517,2.46938563689532,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0,0.329119699826961,1.31333971263276,0.972825714550269,1.16959989940266,3.07370161407471,2.81833479396781,0,0.205809224758569,0.660837565967596,6.08236303326152,0,0.232236671860439,1.28867461322093,5.64713868945359,6.67134131534611,7.22857379227725,0.474529061544512,0.658795818896044,1.75934646160189,1.39269530428806,2.53453313254856,1.79763881730844,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0,0.581857461502877,0.350679099451593,1.45444035385792,1.32849133181642,1.8839847340965,1.48076596706161,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0.502518772325447,1.19021820443007,0.195133647857799,0.788175720530955,0.8858587585951,1.2756381492599,1.47476983244164,1.20879487306127,1.3018415272336,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,1.00988370881749,1.57754109708128,0.390438744296638,0.215423397732799,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.321321316421807,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0.63549621259146,0.882113592219848,0,0.322928853391811,0.301564624640779,0.358117032009409,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0,0.432021363287205,0,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,1.42576470620972,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,2.31827512838629,1.12609485270709,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,1.70174701947806,0.628839487883947,0,2.44471400581777,1.03017528619447,0.64183841918363,0.758091635291392,1.77435509923168,1.50901073108861,1.40462261204824,1.98477972455095,1.66562859971278,0.476293691283074,1.15884325944855,1.92909220463705,1.64834360321323,1.17759136107518,1.71434626192708,1.77475806159337,2.86123427936785,1.16277133305863,1.69396884747595,1.4384483341585,2.0122077016005,0.789209134313529,1.90125759384206,1.68342681497322,1.54225523561426,2.9551344712669,0.409231043169689,1.54936841185966,1.35034627686799,0.749431733813838,1.16965804222704,1.50409737833809,1.53030665655075,2.8676884485537,1.39120701372253 | |||
|short_description=p5@Sema3b | |||
}} | |||
Revision as of 16:46, 14 September 2013
| Short description: | p5@Sema3b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Sema3b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -17bp_to_ENSMUST00000073448, uc009rmh.1_5end |
| EntrezGene: | Sema3b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
