FFCP PHASE1:Mm9::chr9:108551765..108551833,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:108551765..108551833,+|id=chr9:108551765..108551833,+|ontology_enrichment_celltype=CL:0000988!4.51e-07!32;CL:0002032!4.51e-07!32;CL:0000037!4.51e-07!32;CL:0000566!4.51e-07!32;CL:0000837!4.51e-07!32;CL:0000838!8.80e-07!12|ontology_enrichment_celltype_v019_2=CL:0000034,6.33e-09,97;CL:0000988,3.22e-08,32;CL:0002032,3.22e-08,32;CL:0000037,3.22e-08,32;CL:0000837,3.22e-08,32;CL:0000723,7.91e-08,91;CL:0000048,7.91e-08,91;CL:0000838,8.05e-08,12;CL:0000084,5.47e-07,11;CL:0000827,5.47e-07,11;CL:0000542,6.49e-07,13;CL:0000051,6.49e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.60148847104794,2.09385244583617,0.909998478779072,3.32710632437513,3.00537437967808,1.00727563147134,2.33612640595526,18.9811285459117,3.23814060948833,3.7450324211519,1.54096171402954,0.957265907944037,14.5520620441525,12.5011175459166,0.666219523631325,0.607425802169478,0.699561878128147,1.57731082679119,1.91960207048034,2.97072756258621,2.29616883407888,1.88652807281682,1.56719873483361,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,1.71021077510736,0.756090389279792,2.21730510655305,5.08024538767705,1.84519436275371,15.8481681015439,3.75507105676657,1.82858109894342,3.06254034393554,19.2524550138978,26.5654017138092,18.3233310390829,79.9994823722179,23.9065919735456,14.5653105909346,1.38486499773135,1.62203089951223,1.28482726513177,3.12956537739216,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,13.2548258785612,12.3311564141929,6.38578218370682,0.257259436035947,0,0,0,0,0,1.69422266034566,0,0.449949858640699,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0.662605622854841,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.893811366596314,1.38245879930619,0,0.640413505216868,0.52091337055676,1.3959149950069,2.8138130501584,1.37518422999129,0.294628585473668,0.142371680799103,0.372798891650601,0.37863096666592,0.226714680320357,11.5945795480671,1.72084775396277,2.03991400112325,0.539703191637817,0,0.448026887097336,1.68533304158102,1.02258193546835,0.259786004602869,0.70667914902068,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.68510327831436,0.776813650941515,1.03909497345377,0.693941307064543,0,0.461230994512117,0.904335843315735,0.940709657085638,0.753999547978053,0.494389935468748,1.59059292611903,0.884610551949874,0.323533699894818,0.220841518460394,0,0,2.34224637609238,2.72280718857492,0,3.11519323715393,4.79922184794726,3.30382590389968,2.09706895166752,0.457500602818626,0.879580464790051,1.21677024134594,2.04572365864264,2.0778804455956,1.78465389374533,0.305518091550949,1.99051152976149,2.27450482590307,2.10441855886474,0.650602214813519,0.229902104433473,2.16074555766419,0.753524089178575,0.612328492361951,1.66547836370305,0.843315521037559,1.55222022443409,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,0,0,0.59710280045548,0.702213187313235,2.57347907114715,3.12579849335152,0,0.469052119962192,0.720248245844059,0.946978942340841,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.891756905004413,1.31579988682799,0.878200461164203,1.47627060636409,2.52347938276953,1.02904612379284,1.65209391491899,0.793351699990633,0.853153002140936,0.464473343720877,0.902072229254653,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,1.29682829924817,0.995706366271836,0.758671603812327,0.342745537829186,0,0.610953983535943,1.55161989734101,0.210407459670956,0.569128834118316,0.295220295959204,1.09899109488962,1.23397163921801,1.1858105083486,0.333690211432188,0,0.449724224769707,0.202860121388503,0.964708639009667,0.763877555344259,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0.757736633841335,0.717589654087649,3.37710464954357,1.66277871149944,0.947457058852424,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.478364305972461,0.163863314715738,1.03610989119537,1.44649058581512,0,0,0,2.20749397043786,1.60550589987792,1.28932855251423,0,1.26235463602186,1.89304931649754,1.17131623288992,1.29254038639679,1.67278158566786,1.55959071857676,1.69845918473299,1.61924280669958,0.292255857911312,2.37172666767914,2.24924921495265,0.99358059645788,0.35613120733451,0.488660878060728,0.989820737835213,0,0.242780636154981,2.41858845571801,0.565815239267694,0.295301892880773,0.307435147943927,0,1.09060118843252,0,0.316036757935816,0,0,6.80879211507576,0.720244376125241,0.517434735131018,1.71469628025274,1.59606210278046,2.85390108163313,2.46823530903181,3.65357938937519,0.469343416127421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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:108551765..108551833,+ | |||
|id=chr9:108551765..108551833,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.51e-07!32;CL:0002032!4.51e-07!32;CL:0000037!4.51e-07!32;CL:0000566!4.51e-07!32;CL:0000837!4.51e-07!32;CL:0000838!8.80e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.33e-09,97;CL:0000988,3.22e-08,32;CL:0002032,3.22e-08,32;CL:0000037,3.22e-08,32;CL:0000837,3.22e-08,32;CL:0000723,7.91e-08,91;CL:0000048,7.91e-08,91;CL:0000838,8.05e-08,12;CL:0000084,5.47e-07,11;CL:0000827,5.47e-07,11;CL:0000542,6.49e-07,13;CL:0000051,6.49e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.60148847104794,2.09385244583617,0.909998478779072,3.32710632437513,3.00537437967808,1.00727563147134,2.33612640595526,18.9811285459117,3.23814060948833,3.7450324211519,1.54096171402954,0.957265907944037,14.5520620441525,12.5011175459166,0.666219523631325,0.607425802169478,0.699561878128147,1.57731082679119,1.91960207048034,2.97072756258621,2.29616883407888,1.88652807281682,1.56719873483361,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,1.71021077510736,0.756090389279792,2.21730510655305,5.08024538767705,1.84519436275371,15.8481681015439,3.75507105676657,1.82858109894342,3.06254034393554,19.2524550138978,26.5654017138092,18.3233310390829,79.9994823722179,23.9065919735456,14.5653105909346,1.38486499773135,1.62203089951223,1.28482726513177,3.12956537739216,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,13.2548258785612,12.3311564141929,6.38578218370682,0.257259436035947,0,0,0,0,0,1.69422266034566,0,0.449949858640699,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0.662605622854841,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.893811366596314,1.38245879930619,0,0.640413505216868,0.52091337055676,1.3959149950069,2.8138130501584,1.37518422999129,0.294628585473668,0.142371680799103,0.372798891650601,0.37863096666592,0.226714680320357,11.5945795480671,1.72084775396277,2.03991400112325,0.539703191637817,0,0.448026887097336,1.68533304158102,1.02258193546835,0.259786004602869,0.70667914902068,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,0.68510327831436,0.776813650941515,1.03909497345377,0.693941307064543,0,0.461230994512117,0.904335843315735,0.940709657085638,0.753999547978053,0.494389935468748,1.59059292611903,0.884610551949874,0.323533699894818,0.220841518460394,0,0,2.34224637609238,2.72280718857492,0,3.11519323715393,4.79922184794726,3.30382590389968,2.09706895166752,0.457500602818626,0.879580464790051,1.21677024134594,2.04572365864264,2.0778804455956,1.78465389374533,0.305518091550949,1.99051152976149,2.27450482590307,2.10441855886474,0.650602214813519,0.229902104433473,2.16074555766419,0.753524089178575,0.612328492361951,1.66547836370305,0.843315521037559,1.55222022443409,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,0,0,0.59710280045548,0.702213187313235,2.57347907114715,3.12579849335152,0,0.469052119962192,0.720248245844059,0.946978942340841,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.891756905004413,1.31579988682799,0.878200461164203,1.47627060636409,2.52347938276953,1.02904612379284,1.65209391491899,0.793351699990633,0.853153002140936,0.464473343720877,0.902072229254653,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,1.29682829924817,0.995706366271836,0.758671603812327,0.342745537829186,0,0.610953983535943,1.55161989734101,0.210407459670956,0.569128834118316,0.295220295959204,1.09899109488962,1.23397163921801,1.1858105083486,0.333690211432188,0,0.449724224769707,0.202860121388503,0.964708639009667,0.763877555344259,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0.757736633841335,0.717589654087649,3.37710464954357,1.66277871149944,0.947457058852424,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.478364305972461,0.163863314715738,1.03610989119537,1.44649058581512,0,0,0,2.20749397043786,1.60550589987792,1.28932855251423,0,1.26235463602186,1.89304931649754,1.17131623288992,1.29254038639679,1.67278158566786,1.55959071857676,1.69845918473299,1.61924280669958,0.292255857911312,2.37172666767914,2.24924921495265,0.99358059645788,0.35613120733451,0.488660878060728,0.989820737835213,0,0.242780636154981,2.41858845571801,0.565815239267694,0.295301892880773,0.307435147943927,0,1.09060118843252,0,0.316036757935816,0,0,6.80879211507576,0.720244376125241,0.517434735131018,1.71469628025274,1.59606210278046,2.85390108163313,2.46823530903181,3.65357938937519,0.469343416127421,0.847328283455281,1.32317038832977,0.49465875882444,0.484393280087717,0.482503399425247,0.238744688006273,0,1.1659233465194,0.927126510052548,1.02522528478712,0.82554747185289,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,4.75939603982795,5.318155188299,4.00779924032829,0,0.316335993581135,0.406638934253697,0.86404272657441,1.04544148007234,0.218362563746178,0.539457385539283,0.247960367176008,1.30877970992015,0.518459893167171,0.621339313086926,6.76431526421028,0.149516546043979,0.330916980914195,0.194451188344048,0.774958940866387,1.18269287843545,0.58678619322877,1.0416350787516,0.943734099831398,11.1128695579963,7.20075015644664,0,1.01362607645082,0.205421914329655,0.51968329191118,0.716106782669926,1.19208812868759,0.961563596159751,0.7384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| |||
|short_description=p@chr9:108551765..108551833,+ | |||
}} | |||
Revision as of 16:50, 14 September 2013
| Short description: | p@chr9:108551765..108551833, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr9:108551765..108551833, + |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 6.33e-09 | 97 |
| hematopoietic cell | 3.22e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 3.22e-08 | 32 |
| hematopoietic stem cell | 3.22e-08 | 32 |
| hematopoietic multipotent progenitor cell | 3.22e-08 | 32 |
| somatic stem cell | 7.91e-08 | 91 |
| multi fate stem cell | 7.91e-08 | 91 |
| lymphoid lineage restricted progenitor cell | 8.05e-08 | 12 |
| T cell | 5.47e-07 | 11 |
| pro-T cell | 5.47e-07 | 11 |
| lymphocyte | 6.49e-07 | 13 |
| common lymphoid progenitor | 6.49e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
