FFCP PHASE1:Mm9::chr9:65271051..65271063,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330962|HGNC=|MCL_coexpression_id=58|UniProt=Q80WK2|association_with_transcript=-471bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end|description=CAGE_peak_10_at_Ostb_5end|id=chr9:65271051..65271063,-|ontology_enrichment_celltype=CL:0002563!1.64e-13!9;CL:0002251!1.64e-13!9;CL:0000239!1.73e-10!6;CL:0000677!1.73e-10!6;CL:0000212!1.73e-10!6;CL:0000584!1.73e-10!6;CL:0000066!4.54e-10!25;CL:0000075!7.80e-09!7;CL:0000223!1.38e-07!20;CL:0002076!2.74e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.37e-18,6;CL:0000677,1.37e-18,6;CL:0000584,1.37e-18,6;CL:0000075,7.46e-16,7;CL:0002563,3.37e-12,9;CL:0002251,3.37e-12,9;CL:0000066,3.40e-11,25;CL:0000682,3.66e-11,3;CL:0002076,4.53e-07,15;CL:0000223,8.21e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.67e-22!15;UBERON:0000160!6.91e-21!43;UBERON:0001242!2.55e-19!13;UBERON:0000060!2.55e-19!13;UBERON:0001262!2.55e-19!13;UBERON:0004786!2.55e-19!13;UBERON:0005409!1.50e-15!59;UBERON:0004923!4.39e-14!24;UBERON:0003350!1.64e-13!9;UBERON:0004808!1.64e-13!9;UBERON:0001277!1.64e-13!9;UBERON:0000485!1.13e-10!11;UBERON:0001007!4.26e-09!128;UBERON:0001555!4.26e-09!128;UBERON:0007026!4.26e-09!128;UBERON:0004119!8.34e-09!130;UBERON:0000925!8.34e-09!130;UBERON:0006595!8.34e-09!130;UBERON:0004921!9.12e-08!126;UBERON:0004185!9.12e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.54e-24,15;UBERON:0000160,2.76e-22,31;UBERON:0001242,1.89e-18,13;UBERON:0001262,1.89e-18,13;UBERON:0004786,1.89e-18,13;UBERON:0005409,1.81e-15,47;UBERON:0004923,3.78e-14,24;UBERON:0003350,3.37e-12,9;UBERON:0004808,3.37e-12,9;UBERON:0001277,3.37e-12,9;UBERON:0000485,7.20e-10,11;UBERON:0002108,6.79e-08,4;UBERON:0001962,1.45e-07,2;UBERON:0001961,1.45e-07,2;UBERON:0001744,1.45e-07,2;UBERON:0001007,1.55e-07,116;UBERON:0001555,1.55e-07,116;UBERON:0007026,1.55e-07,116;UBERON:0004119,2.46e-07,118;UBERON:0000925,2.46e-07,118;UBERON:0006595,2.46e-07,118|phase1_expression=0,11.8651638597383,9.09998478779072,1.20985684522732,1.00179145989269,3.02182689441402,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,4.81759490241057,9.76194338995534,16.3689558540448,11.4199753323521,3.04037471130198,0.756090389279792,11.3082560434205,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.85115396664481,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0,3.29397909448022,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,1.08069024937347,1.59313018603494,0,0.228497025219458,0,0,0.387904974335251,0.911765658574141,1.89709611372772,4.13308414342886,2.82597710114475,4.07210640941942,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,1.5601883655728,0.505157755894224,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p10@Ostb}} | ||
|EntrezGene=330962 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=Q80WK2 | |||
|association_with_transcript=-471bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |||
|description=CAGE_peak_10_at_Ostb_5end | |||
|id=chr9:65271051..65271063,- | |||
|ontology_enrichment_celltype=CL:0002563!1.64e-13!9;CL:0002251!1.64e-13!9;CL:0000239!1.73e-10!6;CL:0000677!1.73e-10!6;CL:0000212!1.73e-10!6;CL:0000584!1.73e-10!6;CL:0000066!4.54e-10!25;CL:0000075!7.80e-09!7;CL:0000223!1.38e-07!20;CL:0002076!2.74e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.37e-18,6;CL:0000677,1.37e-18,6;CL:0000584,1.37e-18,6;CL:0000075,7.46e-16,7;CL:0002563,3.37e-12,9;CL:0002251,3.37e-12,9;CL:0000066,3.40e-11,25;CL:0000682,3.66e-11,3;CL:0002076,4.53e-07,15;CL:0000223,8.21e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.67e-22!15;UBERON:0000160!6.91e-21!43;UBERON:0001242!2.55e-19!13;UBERON:0000060!2.55e-19!13;UBERON:0001262!2.55e-19!13;UBERON:0004786!2.55e-19!13;UBERON:0005409!1.50e-15!59;UBERON:0004923!4.39e-14!24;UBERON:0003350!1.64e-13!9;UBERON:0004808!1.64e-13!9;UBERON:0001277!1.64e-13!9;UBERON:0000485!1.13e-10!11;UBERON:0001007!4.26e-09!128;UBERON:0001555!4.26e-09!128;UBERON:0007026!4.26e-09!128;UBERON:0004119!8.34e-09!130;UBERON:0000925!8.34e-09!130;UBERON:0006595!8.34e-09!130;UBERON:0004921!9.12e-08!126;UBERON:0004185!9.12e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.54e-24,15;UBERON:0000160,2.76e-22,31;UBERON:0001242,1.89e-18,13;UBERON:0001262,1.89e-18,13;UBERON:0004786,1.89e-18,13;UBERON:0005409,1.81e-15,47;UBERON:0004923,3.78e-14,24;UBERON:0003350,3.37e-12,9;UBERON:0004808,3.37e-12,9;UBERON:0001277,3.37e-12,9;UBERON:0000485,7.20e-10,11;UBERON:0002108,6.79e-08,4;UBERON:0001962,1.45e-07,2;UBERON:0001961,1.45e-07,2;UBERON:0001744,1.45e-07,2;UBERON:0001007,1.55e-07,116;UBERON:0001555,1.55e-07,116;UBERON:0007026,1.55e-07,116;UBERON:0004119,2.46e-07,118;UBERON:0000925,2.46e-07,118;UBERON:0006595,2.46e-07,118 | |||
|phase1_expression=0,11.8651638597383,9.09998478779072,1.20985684522732,1.00179145989269,3.02182689441402,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,3.83981814704176,4.81759490241057,9.76194338995534,16.3689558540448,11.4199753323521,3.04037471130198,0.756090389279792,11.3082560434205,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.85115396664481,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0,3.29397909448022,0.754005626400808,1.1937388322469,0.58489226135736,0.898819408654221,1.08069024937347,1.59313018603494,0,0.228497025219458,0,0,0.387904974335251,0.911765658574141,1.89709611372772,4.13308414342886,2.82597710114475,4.07210640941942,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,1.5601883655728,0.505157755894224,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Ostb | |||
}} |
Revision as of 18:32, 14 September 2013
Short description: | p10@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -471bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.37e-18 | 6 |
gut absorptive cell | 1.37e-18 | 6 |
enterocyte | 1.37e-18 | 6 |
columnar/cuboidal epithelial cell | 7.46e-16 | 7 |
intestinal epithelial cell | 3.37e-12 | 9 |
epithelial cell of alimentary canal | 3.37e-12 | 9 |
epithelial cell | 3.40e-11 | 25 |
M cell of gut | 3.66e-11 | 3 |
endo-epithelial cell | 4.53e-07 | 15 |
endodermal cell | 8.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.54e-24 | 15 |
intestine | 2.76e-22 | 31 |
intestinal mucosa | 1.89e-18 | 13 |
wall of intestine | 1.89e-18 | 13 |
gastrointestinal system mucosa | 1.89e-18 | 13 |
gastrointestinal system | 1.81e-15 | 47 |
organ component layer | 3.78e-14 | 24 |
epithelium of mucosa | 3.37e-12 | 9 |
gastrointestinal system epithelium | 3.37e-12 | 9 |
intestinal epithelium | 3.37e-12 | 9 |
simple columnar epithelium | 7.20e-10 | 11 |
small intestine | 6.79e-08 | 4 |
gut-associated lymphoid tissue | 1.45e-07 | 2 |
mucosa-associated lymphoid tissue | 1.45e-07 | 2 |
lymphoid tissue | 1.45e-07 | 2 |
digestive system | 1.55e-07 | 116 |
digestive tract | 1.55e-07 | 116 |
primitive gut | 1.55e-07 | 116 |
endoderm-derived structure | 2.46e-07 | 118 |
endoderm | 2.46e-07 | 118 |
presumptive endoderm | 2.46e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.