FFCP PHASE1:Mm9::chr9:96688333..96688374,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1881|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:96688333..96688374,-|id=chr9:96688333..96688374,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,5.43e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.85e-25!43;UBERON:0005409!9.00e-22!59;UBERON:0000344!3.56e-09!15;UBERON:0004119!1.13e-07!130;UBERON:0000925!1.13e-07!130;UBERON:0006595!1.13e-07!130;UBERON:0001007!1.98e-07!128;UBERON:0001555!1.98e-07!128;UBERON:0007026!1.98e-07!128;UBERON:0001242!3.09e-07!13;UBERON:0000060!3.09e-07!13;UBERON:0001262!3.09e-07!13;UBERON:0004786!3.09e-07!13;UBERON:0002108!5.79e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.97e-35,31;UBERON:0005409,4.90e-24,47;UBERON:0000344,1.74e-10,15;UBERON:0002113,2.16e-09,14;UBERON:0003918,2.16e-09,14;UBERON:0011143,2.16e-09,14;UBERON:0005095,2.16e-09,14;UBERON:0007687,2.16e-09,14;UBERON:0001007,1.15e-08,116;UBERON:0001555,1.15e-08,116;UBERON:0007026,1.15e-08,116;UBERON:0004119,1.97e-08,118;UBERON:0000925,1.97e-08,118;UBERON:0006595,1.97e-08,118;UBERON:0001242,3.28e-07,13;UBERON:0001262,3.28e-07,13;UBERON:0004786,3.28e-07,13;UBERON:0004921,4.21e-07,114;UBERON:0006554,4.49e-07,18|phase1_expression=0,0,0,0.30246421130683,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,2.55987876469451,2.2940928106717,0,0,0.430942465371778,2.66032787238923,2.52030129759931,0.443461021310609,0,0,0,17.6199488048278,11.6364251750945,17.7627339948261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90895623329899,0,0,0.515469845288373,2.8235693447268,2.00140239460383,3.23383564391351,2.37264530772256,1.64698954724011,4.02136334080431,3.78017296878187,3.31438948102504,3.59527763461689,4.75503709724327,4.97853183135918,0,0.228497025219458,0,2.8511185898344,3.29719228184964,2.87556861550306,4.11037491307672,20.0749801252259,20.5668333472201,15.3012483263033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0.432021363287205,0,0.87345025498471,0,0.0826534557253359,0,6.35113369129785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,1.68914227906064,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.115884325944855,0,0,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr9:96688333..96688374,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1881 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:96688333..96688374,- | |||
|id=chr9:96688333..96688374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,5.43e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.85e-25!43;UBERON:0005409!9.00e-22!59;UBERON:0000344!3.56e-09!15;UBERON:0004119!1.13e-07!130;UBERON:0000925!1.13e-07!130;UBERON:0006595!1.13e-07!130;UBERON:0001007!1.98e-07!128;UBERON:0001555!1.98e-07!128;UBERON:0007026!1.98e-07!128;UBERON:0001242!3.09e-07!13;UBERON:0000060!3.09e-07!13;UBERON:0001262!3.09e-07!13;UBERON:0004786!3.09e-07!13;UBERON:0002108!5.79e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.97e-35,31;UBERON:0005409,4.90e-24,47;UBERON:0000344,1.74e-10,15;UBERON:0002113,2.16e-09,14;UBERON:0003918,2.16e-09,14;UBERON:0011143,2.16e-09,14;UBERON:0005095,2.16e-09,14;UBERON:0007687,2.16e-09,14;UBERON:0001007,1.15e-08,116;UBERON:0001555,1.15e-08,116;UBERON:0007026,1.15e-08,116;UBERON:0004119,1.97e-08,118;UBERON:0000925,1.97e-08,118;UBERON:0006595,1.97e-08,118;UBERON:0001242,3.28e-07,13;UBERON:0001262,3.28e-07,13;UBERON:0004786,3.28e-07,13;UBERON:0004921,4.21e-07,114;UBERON:0006554,4.49e-07,18 | |||
|phase1_expression=0,0,0,0.30246421130683,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,2.55987876469451,2.2940928106717,0,0,0.430942465371778,2.66032787238923,2.52030129759931,0.443461021310609,0,0,0,17.6199488048278,11.6364251750945,17.7627339948261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90895623329899,0,0,0.515469845288373,2.8235693447268,2.00140239460383,3.23383564391351,2.37264530772256,1.64698954724011,4.02136334080431,3.78017296878187,3.31438948102504,3.59527763461689,4.75503709724327,4.97853183135918,0,0.228497025219458,0,2.8511185898344,3.29719228184964,2.87556861550306,4.11037491307672,20.0749801252259,20.5668333472201,15.3012483263033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0.432021363287205,0,0.87345025498471,0,0.0826534557253359,0,6.35113369129785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,1.68914227906064,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.115884325944855,0,0,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:96688333..96688374,- | |||
}} |
Revision as of 19:03, 14 September 2013
Short description: | p@chr9:96688333..96688374, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:96688333..96688374, - |
Coexpression cluster: | MCL_coexpression_mm9:1881 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 5.43e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.97e-35 | 31 |
gastrointestinal system | 4.90e-24 | 47 |
mucosa | 1.74e-10 | 15 |
kidney | 2.16e-09 | 14 |
kidney mesenchyme | 2.16e-09 | 14 |
upper urinary tract | 2.16e-09 | 14 |
kidney rudiment | 2.16e-09 | 14 |
kidney field | 2.16e-09 | 14 |
digestive system | 1.15e-08 | 116 |
digestive tract | 1.15e-08 | 116 |
primitive gut | 1.15e-08 | 116 |
endoderm-derived structure | 1.97e-08 | 118 |
endoderm | 1.97e-08 | 118 |
presumptive endoderm | 1.97e-08 | 118 |
intestinal mucosa | 3.28e-07 | 13 |
wall of intestine | 3.28e-07 | 13 |
gastrointestinal system mucosa | 3.28e-07 | 13 |
subdivision of digestive tract | 4.21e-07 | 114 |
urinary system structure | 4.49e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.