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FFCP PHASE1:Mm9::chrX:156065316..156065331,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=58194|HGNC=|UniProt=Q3TA88,Q3TT90,Q8R550,A2AG61|association_with_transcript=-8bp_to_NM_001135727,uc009uss.2,uc009ust.2,uc012hre.1_5end|description=CAGE_peak_2_at_Sh3kbp1_5end|id=chrX:156065316..156065331,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=3.36312578920067,5.23463111459042,7.27998783023258,0,0,2.01455126294268,2.56973904655078,8.13476937681931,6.05391505252167,7.0219357896598,1.88339765048055,2.39316476986009,4.28001824828014,8.13009742496676,8.66085380720723,6.07425802169478,3.49780939064073,16.5617636813075,16.8650753335059,22.4926515452956,3.06155844543851,8.34043990087437,2.61199789138935,5.11975752938901,6.19405058881359,5.7423196411502,4.30761996159075,5.60225204983311,0.570070258369122,0.504060259519861,2.21730510655305,0,0.61506478758457,0,0,0.166234645358492,0,26.7860243671621,15.626706890476,10.9939986234498,32.3527318417058,30.7370468231301,23.3044969454954,12.211991343631,12.7734933336588,2.38610777810186,2.34717403304412,0.218025156380447,0,0.777719596297134,2.51975558925653,0,8.38913030288682,3.62681071005672,7.05796978199174,5.91696702882678,6.87680255853016,4.64104883049698,12.9482534950143,15.869729378161,6.33831403506179,5.42151251310611,0.889294796111139,10.7987966073768,3.9554654502679,8.5257613793532,2.99600110518405,1.15265491596466,4.14758449233911,16.8757422914613,13.6711224878398,8.56952953211411,6.84692476950002,8.94182834269164,7.18841032636773,5.51531271966013,3.30347642998166,6.12899222808901,4.91540906419979,13.0567424852892,9.33173964744578,9.37644067002168,6.70039197603314,12.380777420697,7.48711414106369,11.7851434189467,11.5321061447273,17.335148461753,3.71058347332602,10.0510174942025,4.92769630792852,0.860423876981386,0,0,1.29955283489534,0,3.08977724289854,6.30592193538814,12.2099422163348,8.83348936275851,3.52108549441701,0,2.54805239706646,0,14.2884087067401,12.4146334082798,12.1325866803548,1.48439043634778,24.5990989464813,4.30482203287992,7.45986905094384,4.56698217468212,3.92046345335299,1.95939432718409,4.35078216402108,3.76999773989026,3.95511948374998,36.005239873058,17.6922110389975,6.79420769779119,14.3546986999256,10.1823803158397,0,4.68449275218475,1.67557365450764,5.10914110417183,5.27186547826049,3.59941638596045,5.33694953706872,16.1773890557209,16.9275223042892,9.67538511269056,15.6441888173049,11.7629110371952,22.0255327233134,10.8701646255398,6.61955865027056,9.45492976636707,1.0108910337347,6.10281382070775,6.63614259109789,5.28774840196988,7.02242306240862,6.48030716693575,4.08218994907967,4.09963904911519,2.71735001223214,6.20888089773638,3.01795190105979,7.75334928688059,8.2697028357056,9.86380795924087,12.7901734643775,12.8853301613202,14.8163138213719,9.15557627365069,5.61770549850588,7.46308930632674,7.95657798307659,8.69928244649108,8.67746421930056,4.68161359798639,8.99629995223799,8.06733350164356,6.78775296704464,7.90615412151387,7.77992864058896,2.45207218971056,2.30383789878873,4.76085645829376,2.67527071501324,1.90059983652932,3.73235195994786,3.08674763148855,10.0939175310781,15.2298826321341,1.65209391491899,2.11560453330835,17.9162130449597,21.1335371392999,8.11865006329188,6.6555563125703,7.33847544688072,5.1360919050391,3.79623249235609,1.64698954724011,5.7807098024062,4.17808591286417,4.09424582950152,1.79763881730844,2.16138049874694,2.58883655230677,6.82804443431094,9.36837803399776,12.3978509240388,7.33144780243131,7.95205197387266,3.57692681440625,4.55303067294652,2.80459281161244,3.767969468193,3.08492909804501,1.77871576252289,6.00642380577939,3.93117990226406,7.19558759631532,6.49152388443209,6.75296047306767,4.58326533206556,8.0554918486227,5.99900339067631,4.3929826110093,7.18841032636773,5.58211421502755,2.49630138491648,0.757736633841335,1.61457672169721,1.92977408545347,9.23765950833023,5.30575952957357,9.4519686336375,10.863685489612,5.86725620721255,7.70528784232352,10.7119638398706,3.70753930929818,10.4039195110086,13.0664166892777,7.49437412690189,12.2897486036803,8.28887912956299,7.66640010482011,15.0791283939272,17.9488875660174,8.85175691434265,5.24279817978992,12.36239542906,6.68106613575558,15.9016897015375,6.05930225290495,8.83423014365519,7.41833614163613,8.61693590931196,7.16906393857656,7.79795359288379,5.37845408498782,6.8817819284732,11.6902343164525,7.90575555893047,16.0660658210904,7.94864477166304,11.0400674273698,7.16702621155735,13.6925202067204,5.30980553359851,7.52619972080442,5.44182402536552,4.71512699389745,4.13422650033082,5.53383266299069,4.65170927702798,1.81766864738753,2.85197902707777,0.948110273807448,1.05418608574999,3.09406629744561,8.17055053809091,5.94201610303324,4.01011919726539,7.07312215604255,6.38424841112185,4.8159580752559,4.93647061806363,1.2178597964584,2.58138878870081,9.95610733059955,4.19003956304428,6.43056386471772,3.87514624070173,5.12659861889325,7.63983001620073,7.55048138827282,4.95517422270746,9.08583979851498,17.7705716029767,14.4470807574256,12.5932278611404,9.04168593622517,10.935538217682,10.2950177942935,5.09935289981566,4.3384950220334,4.42239916174156,1.90934123603023,13.6024477239888,8.53941761932765,5.61627772273367,8.57262013659322,7.42432716737004,4.45052343069908,3.71940550764012,3.66458318777641,6.48074866458964,7.45607175704311,0.56369293868419,7.17679421011098,5.62558867554132,9.52810822885833,11.3660644660403,7.60302564708502,4.92900402312167,3.25510962109875,2.51662426621706,2.65742532908607,0.576060012515731,26.2289230121388,7.29810775044591,11.7090491167903,13.7716072356463,21.6622301757653,22.2523117355017,15.505212988076,14.9166422446323,13.9333700928444,11.507227804905,17.2412776583997,18.4195394598132,21.7438762107145,17.9990429359616,3.62768613784338,1.55390167361845,0.179427713218951,0.671538465456314,9.07991091951295,6.75656911624255,6.59345847362154,12.4333659865858,4.51414893631827,7.34177395402186,10.1271552031579,9.73922372846974,7.38968684077857,13.0165678756422,8.3093328712867,12.8254275044043,7.65546045481175,9.9691329976525,9.83744592328458,6.33102820263478,8.77854721482268,5.63420898988643,12.6415492875513,6.28839487883947,7.72142735490059,8.88986911206461,13.8043488350059,9.94849549734627,10.3605856823157,10.6461305953901,10.5630751176203,10.6751318515666,7.55496798377458,10.5681262878328,5.71552429539688,11.1248952907061,8.10218725947561,5.76920261124629,6.47675248591348,9.25746981440622,6.74408063405482,6.67621331852499,12.0637525804833,11.669563171501,15.2306294205018,12.6220301282213,6.57674278594607,6.65440157844723,9.53941861818155,4.74540072496697,7.88035859004508,6.54769669071503,7.12709469455443,8.48789088317022,10.9916654292696,8.4215379040347,8.16510005383534,11.4772999241306,10.5883881177367,12.2889952878823|short_description=p2@Sh3kbp1}}
|EntrezGene=58194
|HGNC=
|UniProt=Q3TA88,Q3TT90,Q8R550,A2AG61
|association_with_transcript=-8bp_to_NM_001135727,uc009uss.2,uc009ust.2,uc012hre.1_5end
|description=CAGE_peak_2_at_Sh3kbp1_5end
|id=chrX:156065316..156065331,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=3.36312578920067,5.23463111459042,7.27998783023258,0,0,2.01455126294268,2.56973904655078,8.13476937681931,6.05391505252167,7.0219357896598,1.88339765048055,2.39316476986009,4.28001824828014,8.13009742496676,8.66085380720723,6.07425802169478,3.49780939064073,16.5617636813075,16.8650753335059,22.4926515452956,3.06155844543851,8.34043990087437,2.61199789138935,5.11975752938901,6.19405058881359,5.7423196411502,4.30761996159075,5.60225204983311,0.570070258369122,0.504060259519861,2.21730510655305,0,0.61506478758457,0,0,0.166234645358492,0,26.7860243671621,15.626706890476,10.9939986234498,32.3527318417058,30.7370468231301,23.3044969454954,12.211991343631,12.7734933336588,2.38610777810186,2.34717403304412,0.218025156380447,0,0.777719596297134,2.51975558925653,0,8.38913030288682,3.62681071005672,7.05796978199174,5.91696702882678,6.87680255853016,4.64104883049698,12.9482534950143,15.869729378161,6.33831403506179,5.42151251310611,0.889294796111139,10.7987966073768,3.9554654502679,8.5257613793532,2.99600110518405,1.15265491596466,4.14758449233911,16.8757422914613,13.6711224878398,8.56952953211411,6.84692476950002,8.94182834269164,7.18841032636773,5.51531271966013,3.30347642998166,6.12899222808901,4.91540906419979,13.0567424852892,9.33173964744578,9.37644067002168,6.70039197603314,12.380777420697,7.48711414106369,11.7851434189467,11.5321061447273,17.335148461753,3.71058347332602,10.0510174942025,4.92769630792852,0.860423876981386,0,0,1.29955283489534,0,3.08977724289854,6.30592193538814,12.2099422163348,8.83348936275851,3.52108549441701,0,2.54805239706646,0,14.2884087067401,12.4146334082798,12.1325866803548,1.48439043634778,24.5990989464813,4.30482203287992,7.45986905094384,4.56698217468212,3.92046345335299,1.95939432718409,4.35078216402108,3.76999773989026,3.95511948374998,36.005239873058,17.6922110389975,6.79420769779119,14.3546986999256,10.1823803158397,0,4.68449275218475,1.67557365450764,5.10914110417183,5.27186547826049,3.59941638596045,5.33694953706872,16.1773890557209,16.9275223042892,9.67538511269056,15.6441888173049,11.7629110371952,22.0255327233134,10.8701646255398,6.61955865027056,9.45492976636707,1.0108910337347,6.10281382070775,6.63614259109789,5.28774840196988,7.02242306240862,6.48030716693575,4.08218994907967,4.09963904911519,2.71735001223214,6.20888089773638,3.01795190105979,7.75334928688059,8.2697028357056,9.86380795924087,12.7901734643775,12.8853301613202,14.8163138213719,9.15557627365069,5.61770549850588,7.46308930632674,7.95657798307659,8.69928244649108,8.67746421930056,4.68161359798639,8.99629995223799,8.06733350164356,6.78775296704464,7.90615412151387,7.77992864058896,2.45207218971056,2.30383789878873,4.76085645829376,2.67527071501324,1.90059983652932,3.73235195994786,3.08674763148855,10.0939175310781,15.2298826321341,1.65209391491899,2.11560453330835,17.9162130449597,21.1335371392999,8.11865006329188,6.6555563125703,7.33847544688072,5.1360919050391,3.79623249235609,1.64698954724011,5.7807098024062,4.17808591286417,4.09424582950152,1.79763881730844,2.16138049874694,2.58883655230677,6.82804443431094,9.36837803399776,12.3978509240388,7.33144780243131,7.95205197387266,3.57692681440625,4.55303067294652,2.80459281161244,3.767969468193,3.08492909804501,1.77871576252289,6.00642380577939,3.93117990226406,7.19558759631532,6.49152388443209,6.75296047306767,4.58326533206556,8.0554918486227,5.99900339067631,4.3929826110093,7.18841032636773,5.58211421502755,2.49630138491648,0.757736633841335,1.61457672169721,1.92977408545347,9.23765950833023,5.30575952957357,9.4519686336375,10.863685489612,5.86725620721255,7.70528784232352,10.7119638398706,3.70753930929818,10.4039195110086,13.0664166892777,7.49437412690189,12.2897486036803,8.28887912956299,7.66640010482011,15.0791283939272,17.9488875660174,8.85175691434265,5.24279817978992,12.36239542906,6.68106613575558,15.9016897015375,6.05930225290495,8.83423014365519,7.41833614163613,8.61693590931196,7.16906393857656,7.79795359288379,5.37845408498782,6.8817819284732,11.6902343164525,7.90575555893047,16.0660658210904,7.94864477166304,11.0400674273698,7.16702621155735,13.6925202067204,5.30980553359851,7.52619972080442,5.44182402536552,4.71512699389745,4.13422650033082,5.53383266299069,4.65170927702798,1.81766864738753,2.85197902707777,0.948110273807448,1.05418608574999,3.09406629744561,8.17055053809091,5.94201610303324,4.01011919726539,7.07312215604255,6.38424841112185,4.8159580752559,4.93647061806363,1.2178597964584,2.58138878870081,9.95610733059955,4.19003956304428,6.43056386471772,3.87514624070173,5.12659861889325,7.63983001620073,7.55048138827282,4.95517422270746,9.08583979851498,17.7705716029767,14.4470807574256,12.5932278611404,9.04168593622517,10.935538217682,10.2950177942935,5.09935289981566,4.3384950220334,4.42239916174156,1.90934123603023,13.6024477239888,8.53941761932765,5.61627772273367,8.57262013659322,7.42432716737004,4.45052343069908,3.71940550764012,3.66458318777641,6.48074866458964,7.45607175704311,0.56369293868419,7.17679421011098,5.62558867554132,9.52810822885833,11.3660644660403,7.60302564708502,4.92900402312167,3.25510962109875,2.51662426621706,2.65742532908607,0.576060012515731,26.2289230121388,7.29810775044591,11.7090491167903,13.7716072356463,21.6622301757653,22.2523117355017,15.505212988076,14.9166422446323,13.9333700928444,11.507227804905,17.2412776583997,18.4195394598132,21.7438762107145,17.9990429359616,3.62768613784338,1.55390167361845,0.179427713218951,0.671538465456314,9.07991091951295,6.75656911624255,6.59345847362154,12.4333659865858,4.51414893631827,7.34177395402186,10.1271552031579,9.73922372846974,7.38968684077857,13.0165678756422,8.3093328712867,12.8254275044043,7.65546045481175,9.9691329976525,9.83744592328458,6.33102820263478,8.77854721482268,5.63420898988643,12.6415492875513,6.28839487883947,7.72142735490059,8.88986911206461,13.8043488350059,9.94849549734627,10.3605856823157,10.6461305953901,10.5630751176203,10.6751318515666,7.55496798377458,10.5681262878328,5.71552429539688,11.1248952907061,8.10218725947561,5.76920261124629,6.47675248591348,9.25746981440622,6.74408063405482,6.67621331852499,12.0637525804833,11.669563171501,15.2306294205018,12.6220301282213,6.57674278594607,6.65440157844723,9.53941861818155,4.74540072496697,7.88035859004508,6.54769669071503,7.12709469455443,8.48789088317022,10.9916654292696,8.4215379040347,8.16510005383534,11.4772999241306,10.5883881177367,12.2889952878823
|short_description=p2@Sh3kbp1
}}

Revision as of 19:34, 14 September 2013

Short description:p2@Sh3kbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sh3kbp1_5end
Coexpression cluster:NA
Association with transcript: -8bp_to_NM_001135727, uc009uss.2, uc009ust.2, uc012hre.1_5end
EntrezGene:Sh3kbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sh3kbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.77
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C312.95
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.34
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F910.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H924.60
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H136.01
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A614.35
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D515.64
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F222.03
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.45
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E28.27
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E98.70
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I517.92
intestine, embryo E13.CNhs11010.381-16D521.13
intestine, embryo E15.CNhs10602.976-16D88.12
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F89.37
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D54.55
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G25.31
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C510.86
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A313.07
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H711.04
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I57.64
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G217.77
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D19.04
spleen, neonate N20.CNhs11112.824-19H110.94
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A93.72
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F57.18
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I511.37
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B526.23
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I211.71
thymus, embryo E16.CNhs11002.456-26C513.77
thymus, embryo E17.CNhs10581.478-18C121.66
thymus, embryo E18.CNhs10595.1273-19G422.25
thymus, neonate N02.CNhs11181.1541-43F815.51
thymus, neonate N03.CNhs11137.2104-43C714.92
thymus, neonate N06.CNhs11197.681-26C413.93
thymus, neonate N07.CNhs11211.713-19D311.51
thymus, neonate N10.CNhs11194.748-24E417.24
thymus, neonate N20.CNhs11186.820-7A218.42
thymus, neonate N25.CNhs11125.1362-25G721.74
thymus, neonate N30.CNhs11132.1393-42G218.00
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D512.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F98.49
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B412.29





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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