FFCP PHASE1:Mm9::chrX:22938813..22938828,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67455|HGNC=|MCL_coexpression_id=144|UniProt=|association_with_transcript=-11bp_to_uc009suu.1_5end|description=CAGE_peak_3_at_Klhl13_5end|id=chrX:22938813..22938828,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,3.10e-27,3;CL:0000351,3.10e-27,3;CL:0002494,2.77e-12,3;CL:0000737,2.77e-12,3;CL:0000746,2.77e-12,3;CL:0000513,2.77e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.11e-27,3;UBERON:0000478,1.11e-27,3;UBERON:0000158,1.11e-27,3;UBERON:0000358,3.10e-27,3;UBERON:0000307,3.10e-27,3;UBERON:0007010,3.10e-27,3;UBERON:0005795,1.48e-20,4;UBERON:0000995,1.48e-20,4;UBERON:0001987,7.02e-19,2;UBERON:0003124,7.02e-19,2;UBERON:0004340,7.02e-19,2;UBERON:0003975,1.36e-16,5;UBERON:0003134,1.29e-10,8;UBERON:0000305,1.63e-10,1;UBERON:0006834,5.62e-10,1;UBERON:0004175,1.67e-09,9;UBERON:0000474,1.67e-09,9;UBERON:0003100,7.05e-08,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.85960031981627,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,351.51124411828,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0,0,0,2.45837904218165,0,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,255.557490081381,334.271007823108,0,0,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0,0,0,0.598066184175915,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,218.43417812008,27.542153979109,343.32404046454,0,7.13193406714492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p3@Klhl13}} | ||
|EntrezGene=67455 | |||
|HGNC= | |||
|MCL_coexpression_id=144 | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_uc009suu.1_5end | |||
|description=CAGE_peak_3_at_Klhl13_5end | |||
|id=chrX:22938813..22938828,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.10e-27,3;CL:0000351,3.10e-27,3;CL:0002494,2.77e-12,3;CL:0000737,2.77e-12,3;CL:0000746,2.77e-12,3;CL:0000513,2.77e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.11e-27,3;UBERON:0000478,1.11e-27,3;UBERON:0000158,1.11e-27,3;UBERON:0000358,3.10e-27,3;UBERON:0000307,3.10e-27,3;UBERON:0007010,3.10e-27,3;UBERON:0005795,1.48e-20,4;UBERON:0000995,1.48e-20,4;UBERON:0001987,7.02e-19,2;UBERON:0003124,7.02e-19,2;UBERON:0004340,7.02e-19,2;UBERON:0003975,1.36e-16,5;UBERON:0003134,1.29e-10,8;UBERON:0000305,1.63e-10,1;UBERON:0006834,5.62e-10,1;UBERON:0004175,1.67e-09,9;UBERON:0000474,1.67e-09,9;UBERON:0003100,7.05e-08,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.85960031981627,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,351.51124411828,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0,0,0,2.45837904218165,0,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,255.557490081381,334.271007823108,0,0,0,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0,0,0,0.598066184175915,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,218.43417812008,27.542153979109,343.32404046454,0,7.13193406714492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p3@Klhl13 | |||
}} |
Revision as of 19:45, 14 September 2013
Short description: | p3@Klhl13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Klhl13_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | -11bp_to_uc009suu.1_5end |
EntrezGene: | Klhl13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.10e-27 | 3 |
trophoblast cell | 3.10e-27 | 3 |
cardiocyte | 2.77e-12 | 3 |
striated muscle cell | 2.77e-12 | 3 |
cardiac muscle cell | 2.77e-12 | 3 |
cardiac muscle myoblast | 2.77e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.11e-27 | 3 |
extraembryonic structure | 1.11e-27 | 3 |
membranous layer | 1.11e-27 | 3 |
blastocyst | 3.10e-27 | 3 |
blastula | 3.10e-27 | 3 |
cleaving embryo | 3.10e-27 | 3 |
embryonic uterus | 1.48e-20 | 4 |
uterus | 1.48e-20 | 4 |
placenta | 7.02e-19 | 2 |
chorion | 7.02e-19 | 2 |
allantois | 7.02e-19 | 2 |
internal female genitalia | 1.36e-16 | 5 |
female reproductive organ | 1.29e-10 | 8 |
amnion | 1.63e-10 | 1 |
uterus or analog | 5.62e-10 | 1 |
internal genitalia | 1.67e-09 | 9 |
female reproductive system | 1.67e-09 | 9 |
female organism | 7.05e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.