FFCP PHASE1:Mm9::chrX:45459962..45459971,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:45459962..45459971,+|id=chrX:45459962..45459971,+|ontology_enrichment_celltype=CL:0000239!3.59e-12!6;CL:0000677!3.59e-12!6;CL:0000212!3.59e-12!6;CL:0000584!3.59e-12!6;CL:0000075!2.19e-10!7;CL:0000473!6.66e-10!3;CL:0000627!6.66e-10!3;CL:0000682!6.66e-10!3;CL:0002563!5.30e-08!9;CL:0002251!5.30e-08!9|ontology_enrichment_celltype_v019_2=CL:0000682,2.29e-17,3;CL:0000239,7.11e-15,6;CL:0000677,7.11e-15,6;CL:0000584,7.11e-15,6;CL:0000075,8.69e-13,7;CL:0000066,3.19e-10,25;CL:0002563,5.37e-10,9;CL:0002251,5.37e-10,9;CL:0000473,9.42e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.70e-18!15;UBERON:0001242!7.94e-14!13;UBERON:0000060!7.94e-14!13;UBERON:0001262!7.94e-14!13;UBERON:0004786!7.94e-14!13;UBERON:0004923!8.67e-13!24;UBERON:0000160!1.33e-12!43;UBERON:0000331!2.94e-10!3;UBERON:0002116!2.94e-10!3;UBERON:0001204!2.94e-10!3;UBERON:0001168!2.94e-10!3;UBERON:0005409!1.52e-09!59;UBERON:0003350!5.30e-08!9;UBERON:0004808!5.30e-08!9;UBERON:0001277!5.30e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-28,31;UBERON:0002108,4.28e-23,4;UBERON:0001242,1.48e-20,13;UBERON:0001262,1.48e-20,13;UBERON:0004786,1.48e-20,13;UBERON:0005409,2.64e-18,47;UBERON:0000331,4.88e-18,3;UBERON:0002116,4.88e-18,3;UBERON:0001204,4.88e-18,3;UBERON:0001168,4.88e-18,3;UBERON:0000344,9.65e-18,15;UBERON:0004923,7.36e-11,24;UBERON:0003350,5.37e-10,9;UBERON:0004808,5.37e-10,9;UBERON:0001277,5.37e-10,9;UBERON:0000485,3.26e-08,11|phase1_expression=0,4.18770489167233,2.27499619694768,1.20985684522732,3.00537437967808,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.22940928106717,5.16808767703518,2.58457197695445,1.939241094173,17.4821545899864,13.3575968772763,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37264530772256,0,0,0,0,1.79763881730844,1.72910439899755,4.77939055810481,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.627994911365499,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,2.33184669303881,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:45459962..45459971,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:45459962..45459971,+ | |||
|id=chrX:45459962..45459971,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.59e-12!6;CL:0000677!3.59e-12!6;CL:0000212!3.59e-12!6;CL:0000584!3.59e-12!6;CL:0000075!2.19e-10!7;CL:0000473!6.66e-10!3;CL:0000627!6.66e-10!3;CL:0000682!6.66e-10!3;CL:0002563!5.30e-08!9;CL:0002251!5.30e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.29e-17,3;CL:0000239,7.11e-15,6;CL:0000677,7.11e-15,6;CL:0000584,7.11e-15,6;CL:0000075,8.69e-13,7;CL:0000066,3.19e-10,25;CL:0002563,5.37e-10,9;CL:0002251,5.37e-10,9;CL:0000473,9.42e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.70e-18!15;UBERON:0001242!7.94e-14!13;UBERON:0000060!7.94e-14!13;UBERON:0001262!7.94e-14!13;UBERON:0004786!7.94e-14!13;UBERON:0004923!8.67e-13!24;UBERON:0000160!1.33e-12!43;UBERON:0000331!2.94e-10!3;UBERON:0002116!2.94e-10!3;UBERON:0001204!2.94e-10!3;UBERON:0001168!2.94e-10!3;UBERON:0005409!1.52e-09!59;UBERON:0003350!5.30e-08!9;UBERON:0004808!5.30e-08!9;UBERON:0001277!5.30e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-28,31;UBERON:0002108,4.28e-23,4;UBERON:0001242,1.48e-20,13;UBERON:0001262,1.48e-20,13;UBERON:0004786,1.48e-20,13;UBERON:0005409,2.64e-18,47;UBERON:0000331,4.88e-18,3;UBERON:0002116,4.88e-18,3;UBERON:0001204,4.88e-18,3;UBERON:0001168,4.88e-18,3;UBERON:0000344,9.65e-18,15;UBERON:0004923,7.36e-11,24;UBERON:0003350,5.37e-10,9;UBERON:0004808,5.37e-10,9;UBERON:0001277,5.37e-10,9;UBERON:0000485,3.26e-08,11 | |||
|phase1_expression=0,4.18770489167233,2.27499619694768,1.20985684522732,3.00537437967808,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.22940928106717,5.16808767703518,2.58457197695445,1.939241094173,17.4821545899864,13.3575968772763,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37264530772256,0,0,0,0,1.79763881730844,1.72910439899755,4.77939055810481,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.627994911365499,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,2.33184669303881,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:45459962..45459971,+ | |||
}} |
Revision as of 19:49, 14 September 2013
Short description: | p@chrX:45459962..45459971, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:45459962..45459971, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.29e-17 | 3 |
brush border epithelial cell | 7.11e-15 | 6 |
gut absorptive cell | 7.11e-15 | 6 |
enterocyte | 7.11e-15 | 6 |
columnar/cuboidal epithelial cell | 8.69e-13 | 7 |
epithelial cell | 3.19e-10 | 25 |
intestinal epithelial cell | 5.37e-10 | 9 |
epithelial cell of alimentary canal | 5.37e-10 | 9 |
defensive cell | 9.42e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-28 | 31 |
small intestine | 4.28e-23 | 4 |
intestinal mucosa | 1.48e-20 | 13 |
wall of intestine | 1.48e-20 | 13 |
gastrointestinal system mucosa | 1.48e-20 | 13 |
gastrointestinal system | 2.64e-18 | 47 |
ileal mucosa | 4.88e-18 | 3 |
ileum | 4.88e-18 | 3 |
mucosa of small intestine | 4.88e-18 | 3 |
wall of small intestine | 4.88e-18 | 3 |
mucosa | 9.65e-18 | 15 |
organ component layer | 7.36e-11 | 24 |
epithelium of mucosa | 5.37e-10 | 9 |
gastrointestinal system epithelium | 5.37e-10 | 9 |
intestinal epithelium | 5.37e-10 | 9 |
simple columnar epithelium | 3.26e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.