FFCP PHASE1:Mm9::chrX:80288765..80288770,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13405|HGNC=|MCL_coexpression_id=16|UniProt=|association_with_transcript=24bp_to_ENSMUST00000147740_5end|description=CAGE_peak_26_at_Dmd_5end|id=chrX:80288765..80288770,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.59e-27!9;UBERON:0000019!1.59e-27!9;UBERON:0000047!1.59e-27!9;UBERON:0004088!1.59e-27!9;UBERON:0002104!1.59e-27!9;UBERON:0001456!1.59e-27!9;UBERON:0003072!1.59e-27!9;UBERON:0003071!1.59e-27!9;UBERON:0004128!1.59e-27!9;UBERON:0001444!2.09e-22!11;UBERON:0000020!1.74e-20!12;UBERON:0001032!1.74e-20!12;UBERON:0004456!1.74e-20!12;UBERON:0005085!7.36e-19!13;UBERON:0000033!1.10e-13!63;UBERON:0002346!6.64e-12!71;UBERON:0003075!6.64e-12!71;UBERON:0007284!6.64e-12!71;UBERON:0007811!5.49e-11!86;UBERON:0003056!6.03e-11!49;UBERON:0000007!4.84e-10!8;UBERON:0003296!4.84e-10!8;UBERON:0010133!4.84e-10!8;UBERON:0000153!7.39e-10!94;UBERON:0001894!4.58e-08!10;UBERON:0006222!4.58e-08!10;UBERON:0004733!5.40e-08!6;UBERON:0004732!5.40e-08!6;UBERON:0002028!5.40e-08!6;UBERON:0007277!5.40e-08!6;UBERON:0004121!1.26e-07!102;UBERON:0000924!1.26e-07!102;UBERON:0006601!1.26e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.55e-41,9;UBERON:0000019,9.55e-41,9;UBERON:0000047,9.55e-41,9;UBERON:0010312,9.55e-41,9;UBERON:0004088,9.55e-41,9;UBERON:0002104,9.55e-41,9;UBERON:0001456,9.55e-41,9;UBERON:0003072,9.55e-41,9;UBERON:0004128,9.55e-41,9;UBERON:0003071,9.55e-41,9;UBERON:0001444,1.81e-33,11;UBERON:0000020,9.73e-31,12;UBERON:0001032,9.73e-31,12;UBERON:0004456,9.73e-31,12;UBERON:0000033,2.00e-28,13;UBERON:0005085,2.00e-28,13;UBERON:0007811,1.34e-10,36;UBERON:0000153,6.12e-09,43;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003056,6.88e-08,49;UBERON:0010371,1.48e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52530227063769,0,0,0.180062129805349,0.753524089178575,1.42876648217788,1.40925092313335,2.24884138943349,6.72628763921441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p26@Dmd}} | ||
|EntrezGene=13405 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENSMUST00000147740_5end | |||
|description=CAGE_peak_26_at_Dmd_5end | |||
|id=chrX:80288765..80288770,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.59e-27!9;UBERON:0000019!1.59e-27!9;UBERON:0000047!1.59e-27!9;UBERON:0004088!1.59e-27!9;UBERON:0002104!1.59e-27!9;UBERON:0001456!1.59e-27!9;UBERON:0003072!1.59e-27!9;UBERON:0003071!1.59e-27!9;UBERON:0004128!1.59e-27!9;UBERON:0001444!2.09e-22!11;UBERON:0000020!1.74e-20!12;UBERON:0001032!1.74e-20!12;UBERON:0004456!1.74e-20!12;UBERON:0005085!7.36e-19!13;UBERON:0000033!1.10e-13!63;UBERON:0002346!6.64e-12!71;UBERON:0003075!6.64e-12!71;UBERON:0007284!6.64e-12!71;UBERON:0007811!5.49e-11!86;UBERON:0003056!6.03e-11!49;UBERON:0000007!4.84e-10!8;UBERON:0003296!4.84e-10!8;UBERON:0010133!4.84e-10!8;UBERON:0000153!7.39e-10!94;UBERON:0001894!4.58e-08!10;UBERON:0006222!4.58e-08!10;UBERON:0004733!5.40e-08!6;UBERON:0004732!5.40e-08!6;UBERON:0002028!5.40e-08!6;UBERON:0007277!5.40e-08!6;UBERON:0004121!1.26e-07!102;UBERON:0000924!1.26e-07!102;UBERON:0006601!1.26e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.55e-41,9;UBERON:0000019,9.55e-41,9;UBERON:0000047,9.55e-41,9;UBERON:0010312,9.55e-41,9;UBERON:0004088,9.55e-41,9;UBERON:0002104,9.55e-41,9;UBERON:0001456,9.55e-41,9;UBERON:0003072,9.55e-41,9;UBERON:0004128,9.55e-41,9;UBERON:0003071,9.55e-41,9;UBERON:0001444,1.81e-33,11;UBERON:0000020,9.73e-31,12;UBERON:0001032,9.73e-31,12;UBERON:0004456,9.73e-31,12;UBERON:0000033,2.00e-28,13;UBERON:0005085,2.00e-28,13;UBERON:0007811,1.34e-10,36;UBERON:0000153,6.12e-09,43;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003056,6.88e-08,49;UBERON:0010371,1.48e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52530227063769,0,0,0.180062129805349,0.753524089178575,1.42876648217788,1.40925092313335,2.24884138943349,6.72628763921441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p26@Dmd | |||
}} |
Revision as of 20:13, 14 September 2013
Short description: | p26@Dmd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_26_at_Dmd_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 24bp_to_ENSMUST00000147740_5end |
EntrezGene: | Dmd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 9.55e-41 | 9 |
camera-type eye | 9.55e-41 | 9 |
simple eye | 9.55e-41 | 9 |
immature eye | 9.55e-41 | 9 |
ocular region | 9.55e-41 | 9 |
visual system | 9.55e-41 | 9 |
face | 9.55e-41 | 9 |
optic cup | 9.55e-41 | 9 |
optic vesicle | 9.55e-41 | 9 |
eye primordium | 9.55e-41 | 9 |
subdivision of head | 1.81e-33 | 11 |
sense organ | 9.73e-31 | 12 |
sensory system | 9.73e-31 | 12 |
entire sense organ system | 9.73e-31 | 12 |
head | 2.00e-28 | 13 |
ectodermal placode | 2.00e-28 | 13 |
craniocervical region | 1.34e-10 | 36 |
anterior region of body | 6.12e-09 | 43 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
pre-chordal neural plate | 6.88e-08 | 49 |
ecto-epithelium | 1.48e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.