FFCP PHASE1:Hg19::chr1:3240057..3240066,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr1:3240057..3240066,- | |||
|id=chr1:3240057..3240066,- | |||
|ontology_enrichment_celltype=CL:0001014!7.36e-08!2;CL:0001016!7.36e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.53e-12;14!DOID:3493;1.43e-10;2!DOID:4929;1.97e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.63e-12,14;DOID:3493,1.43e-10,2;DOID:4929,1.89e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.29e-16!32;UBERON:0002780!2.37e-16!41;UBERON:0001890!2.37e-16!41;UBERON:0006240!2.37e-16!41;UBERON:0003080!7.01e-16!42;UBERON:0002020!2.19e-15!34;UBERON:0003528!2.19e-15!34;UBERON:0001893!3.04e-15!34;UBERON:0003056!2.43e-14!61;UBERON:0002791!1.30e-13!33;UBERON:0000956!5.27e-13!25;UBERON:0000203!5.27e-13!25;UBERON:0007023!6.71e-13!115;UBERON:0002619!2.03e-12!22;UBERON:0001049!2.27e-12!57;UBERON:0005068!2.27e-12!57;UBERON:0006241!2.27e-12!57;UBERON:0007135!2.27e-12!57;UBERON:0000955!4.78e-12!69;UBERON:0006238!4.78e-12!69;UBERON:0002616!7.99e-12!59;UBERON:0001950!5.60e-11!20;UBERON:0002771!1.83e-10!3;UBERON:0003075!4.15e-10!86;UBERON:0007284!4.15e-10!86;UBERON:0005743!5.85e-10!86;UBERON:0001017!1.71e-09!82;UBERON:0002346!1.84e-09!90;UBERON:0000200!9.62e-09!6;UBERON:0000073!1.31e-08!94;UBERON:0001016!1.31e-08!94;UBERON:0000062!6.25e-08!511;UBERON:0000160!5.17e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.29e-28;22!UBERON:0000160;3.55e-25;17!UBERON:0004913;1.71e-19;1!UBERON:0003703;1.71e-19;1!UBERON:0001174;1.71e-19;1!UBERON:0004914;1.71e-19;1!UBERON:0001874;3.56e-19;1!UBERON:0001000;3.56e-19;1!UBERON:0005352;3.56e-19;1!UBERON:0001052;4.70e-19;4!UBERON:0004921;1.95e-18;33!UBERON:0002108;1.40e-15;4!UBERON:0004907;1.88e-15;5!UBERON:0000059;2.20e-15;11!UBERON:0001954;2.85e-10;2!UBERON:0003022;2.85e-10;2!UBERON:0002421;2.85e-10;2!UBERON:0002600;2.85e-10;2!UBERON:0000058;3.63e-08;10!UBERON:0002114;2.25e-07;2!UBERON:0006947;2.88e-07;3!UBERON:0005383;2.88e-07;3!UBERON:0004054;2.88e-07;3!UBERON:0005382;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-25,17;UBERON:0005409,6.26e-25,25;UBERON:0004913,1.56e-19,1;UBERON:0003703,1.56e-19,1;UBERON:0001174,1.56e-19,1;UBERON:0004914,1.56e-19,1;UBERON:0001000,2.25e-19,1;UBERON:0005352,2.25e-19,1;UBERON:0001874,3.25e-19,1;UBERON:0001052,5.15e-19,4;UBERON:0002108,1.40e-15,4;UBERON:0004907,2.02e-15,5;UBERON:0000059,2.37e-15,11;UBERON:0001954,2.49e-10,2;UBERON:0003022,2.49e-10,2;UBERON:0002421,2.49e-10,2;UBERON:0002600,2.49e-10,2;UBERON:0002114,2.19e-07,2;UBERON:0006947,2.47e-07,3;UBERON:0004054,2.47e-07,3;UBERON:0005383,2.79e-07,3;UBERON:0005382,2.79e-07,3;UBERON:0004921,3.96e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0,0,0.234264445725339,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,2.32991899054908,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,1.59045937961861,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51355346568977,0.0675375846183947,0.781078098613847,0.826747186004736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,1.41404030924402,1.12108865325516,3.65263488203798,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,15.0169857431322,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.771741581079447,3.0598338470554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:3240057..3240066,- | |||
}} |
Revision as of 15:57, 10 January 2014
Short description: | p@chr1:3240057..3240066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:3240057..3240066, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.83e-25 | 17 |
gastrointestinal system | 6.26e-25 | 25 |
hepatopancreatic ampulla | 1.56e-19 | 1 |
extrahepatic bile duct | 1.56e-19 | 1 |
common bile duct | 1.56e-19 | 1 |
duodenal papilla | 1.56e-19 | 1 |
vas deferens | 2.25e-19 | 1 |
spermatic cord | 2.25e-19 | 1 |
putamen | 3.25e-19 | 1 |
rectum | 5.15e-19 | 4 |
small intestine | 1.40e-15 | 4 |
lower digestive tract | 2.02e-15 | 5 |
large intestine | 2.37e-15 | 11 |
Ammon's horn | 2.49e-10 | 2 |
lobe parts of cerebral cortex | 2.49e-10 | 2 |
hippocampal formation | 2.49e-10 | 2 |
limbic lobe | 2.49e-10 | 2 |
duodenum | 2.19e-07 | 2 |
male genital duct | 2.47e-07 | 3 |
internal male genitalia | 2.47e-07 | 3 |
caudate-putamen | 2.79e-07 | 3 |
dorsal striatum | 2.79e-07 | 3 |
subdivision of digestive tract | 3.96e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.63e-12 | 14 |
signet ring cell adenocarcinoma | 1.43e-10 | 2 |
tubular adenocarcinoma | 1.89e-10 | 2 |