FFCP PHASE1:Hg19::chr1:12123414..12123445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |||
|TSSclassifier=strong | |||
|UniProt=P28908 | |||
|association_with_transcript=0bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | |||
|coexpression_cluster_id=C920 | |||
|description=CAGE_peak_3_at_TNFRSF8_5end | |||
|id=chr1:12123414..12123445,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.14e-11!5;CL:0000453!3.52e-07!5;CL:0002274!8.45e-07!5;CL:0000457!8.45e-07!5;CL:0002191!8.45e-07!5;CL:0000097!8.45e-07!5;CL:0000831!8.45e-07!5;CL:0002028!8.45e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.10e-21;5!CL:0000039;6.59e-11;7!CL:0000586;6.59e-11;7!CL:0001014;8.67e-11;2!CL:0001016;8.67e-11;2!CL:0000453;5.48e-09;5!CL:0000945;1.71e-08;24!CL:0002321;4.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.48e-22,5;CL:0000039,6.69e-11,7;CL:0000586,6.69e-11,7;CL:0001014,8.68e-11,2;CL:0001016,8.68e-11,2;CL:0000988,2.93e-09,177;CL:0000453,5.86e-09,5;CL:0000838,1.17e-08,52;CL:0000945,1.84e-08,24;CL:0000826,1.84e-08,24;CL:0000542,1.87e-08,53;CL:0000051,1.87e-08,53;CL:0002032,1.56e-07,161;CL:0000837,1.56e-07,161;CL:0000037,4.90e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.20e-07;10!UBERON:0005564;1.20e-07;10 | |||
|ontology_enrichment_disease=DOID:2531!8.04e-11!51;DOID:0060083!8.04e-11!51;DOID:1036!1.32e-08!8;DOID:1240!7.34e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.06e-11,10;DOID:2531,1.13e-08,51;DOID:0060083,1.13e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000369!9.71e-09!4;UBERON:0002435!9.71e-09!4;UBERON:0000204!9.71e-09!4;UBERON:0010082!9.71e-09!4;UBERON:0009663!2.35e-07!7;UBERON:0005383!5.98e-07!3;UBERON:0005382!5.98e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.50e-09;8!UBERON:0000922;6.93e-08;49!UBERON:0003135;5.96e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.52e-09,8;UBERON:0003135,6.01e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50839093912912,5.50073949314637,5.35233312933019,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55974639639243,0,0,0,1.92136979588513,2.47112760363769,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,2.31750041646231,1.06023814657188,1.74290914304278,1.24393266018445,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880484340132261,2.07328115540772,1.00883967391873,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0.766021480529467,1.69338866179106,0,0.842391534340376,0,0,0,3.89371088943688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9543467026632,0,0,0,0,0,0,0,94.4326199319332,0,0,0,0,0,7.01583391128096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0,0,0,0.31396051279005,0,1.57916962432026,0.784250137270958,1.00692952185506,0,0.476809736941136,0,0,0,0,0,0,0,25.7973381952141,44.235890142848,43.4395309942694,0,0,0.234264445725339,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,1.20084057741958,0,0,0,19.4536642166693,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2015066337104,0,0,0.482259445395058,0.550157746388935,0,47.6944650089181,17.0236430002749,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,3.85834847521893,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675769762612291,0,0,0.303859956177382,0,1.16916185303633,0,0.327130788511688,0,0.245772908753719,0,16.5989538559592,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,1.22035527683273,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,1.03710588800201,0,0,0,0,0,0,3.61365856806804,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30165200803622,1.44862788090568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515663103788617,5.1969401080963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,7.85313989013259,4.27547848424897,6.80022256557852,4.26202816797038,0,0.267964130156178,0,0.310298987585686,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,8.01421230758082 | |||
|short_description=p3@TNFRSF8 | |||
}} |
Revision as of 16:22, 10 January 2014
Short description: | p3@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF8_5end |
Coexpression cluster: | C920_anaplastic_adult_hereditary_cord_hairy_immature_xeroderma |
Association with transcript: | 0bp_to_ENST00000263932, NM_001243, uc001atq.2, uc010obc.1_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | P28908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.48e-22 | 5 |
germ line cell | 6.69e-11 | 7 |
germ cell | 6.69e-11 | 7 |
CD1a-positive Langerhans cell | 8.68e-11 | 2 |
immature CD1a-positive Langerhans cell | 8.68e-11 | 2 |
hematopoietic cell | 2.93e-09 | 177 |
Langerhans cell | 5.86e-09 | 5 |
lymphoid lineage restricted progenitor cell | 1.17e-08 | 52 |
lymphocyte of B lineage | 1.84e-08 | 24 |
pro-B cell | 1.84e-08 | 24 |
lymphocyte | 1.87e-08 | 53 |
common lymphoid progenitor | 1.87e-08 | 53 |
hematopoietic oligopotent progenitor cell | 1.56e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-07 | 161 |
hematopoietic stem cell | 4.90e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
testis | 1.52e-09 | 8 |
male reproductive organ | 6.01e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.06e-11 | 10 |
hematologic cancer | 1.13e-08 | 51 |
immune system cancer | 1.13e-08 | 51 |