FFCP PHASE1:Hg19::chr1:25246232..25246236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr1:25246232..25246236,+ | |||
|id=chr1:25246232..25246236,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.21e-15;2!CL:1000448;2.21e-15;2!CL:0002308;2.21e-15;2!CL:0002140;2.21e-15;2!CL:0002178;1.04e-10;3!CL:0000622;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0002178,1.20e-10,3;CL:0000622,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.73e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002084!1.03e-09!1;UBERON:0002082!1.03e-09!1;UBERON:0004706!1.03e-09!1;UBERON:0000997!1.99e-09!1;UBERON:0005056!1.99e-09!1;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.73e-29;1!UBERON:0002082;2.73e-29;1!UBERON:0002419;2.21e-15;2!UBERON:0007771;2.21e-15;2!UBERON:0003297;2.21e-15;2!UBERON:0001821;2.21e-15;2!UBERON:0003487;2.21e-15;2!UBERON:0001820;2.21e-15;2!UBERON:0004151;1.04e-10;3!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.78e-29,1;UBERON:0002082,1.78e-29,1;UBERON:0010226,1.78e-29,1;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2;UBERON:0004151,8.99e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,5.19927153827018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93125815030659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78537165953498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,1.98627591109629,0,0,0,0,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:25246232..25246236,+ | |||
}} |
Revision as of 17:06, 10 January 2014
Short description: | p@chr1:25246232..25246236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:25246232..25246236, + |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.37e-15 | 2 |
epithelial cell of sweat gland | 2.37e-15 | 2 |
epithelial cell of skin gland | 2.37e-15 | 2 |
acinar cell of sebaceous gland | 2.37e-15 | 2 |
epithelial cell of stomach | 1.20e-10 | 3 |
acinar cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.78e-29 | 1 |
cardiac ventricle | 1.78e-29 | 1 |
future cardiac ventricle | 1.78e-29 | 1 |
skin gland | 2.37e-15 | 2 |
epidermis gland | 2.37e-15 | 2 |
gland of integumental system | 2.37e-15 | 2 |
sebaceous gland | 2.37e-15 | 2 |
skin sebaceous gland | 2.37e-15 | 2 |
sweat gland | 2.37e-15 | 2 |
sweat gland placode | 2.37e-15 | 2 |
sebaceous gland placode | 2.37e-15 | 2 |
cardiac chamber | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.74e-15 | 2 |