FFCP PHASE1:Hg19::chr1:27339317..27339375,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28273 | |||
|TSSclassifier=strong | |||
|UniProt=Q96A09 | |||
|association_with_transcript=0bp_to_ENST00000289166,NM_052943,uc010ofj.1_5end | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_1_at_FAM46B_5end | |||
|id=chr1:27339317..27339375,- | |||
|ontology_enrichment_celltype=CL:0000066!2.63e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.43e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.87e-09,19;CL:0000066,1.23e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.51e-14!659;UBERON:0000062!4.47e-12!511;UBERON:0004119!6.62e-09!169;UBERON:0000925!6.62e-09!169;UBERON:0006595!6.62e-09!169;UBERON:0000467!1.70e-08!625;UBERON:0000480!2.87e-08!626;UBERON:0000922!3.20e-08!612;UBERON:0003102!1.49e-07!95;UBERON:0005631!1.80e-07!14;UBERON:0000158!1.80e-07!14;UBERON:0000478!1.81e-07!24;UBERON:0003104!3.60e-07!238;UBERON:0009142!3.60e-07!238;UBERON:0000464!4.81e-07!104;UBERON:0001004!6.32e-07!72;UBERON:0000063!7.04e-07!97;UBERON:0004923!8.76e-07!57;UBERON:0005085!8.91e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.62e-08;33!UBERON:0000478;1.69e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.09e-09,160;UBERON:0000925,1.09e-09,160;UBERON:0006595,1.09e-09,160;UBERON:0005631,6.73e-08,14;UBERON:0000158,6.73e-08,14;UBERON:0000478,1.45e-07,24;UBERON:0001004,2.27e-07,74;UBERON:0000033,2.74e-07,56;UBERON:0001007,4.63e-07,145;UBERON:0001555,4.63e-07,145;UBERON:0007026,4.63e-07,145;UBERON:0003102,8.60e-07,99;UBERON:0004921,9.52e-07,118 | |||
|phase1_expression=10.3556676184217,12.203729861786,13.5316227932132,7.00513088471913,21.4541325325098,9.59572376510406,17.7309914717817,0.631719873426831,0.783556884599516,15.4812379995951,69.7801167972428,81.4786318045543,62.249006861915,7.1784484716827,4.97096063591874,0,0,1.46062018077475,0,24.0086063249736,13.4640456221207,44.1971157284104,16.8879232407323,11.0868284309036,16.8227137057036,0,0,0,3.54027849164014,0.767658796194425,4.18003532953405,32.1797428567625,28.6145622839338,17.0086844676722,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0,1.59938062657521,2.64513160582167,2.91100873425379,2.09186133215116,6.98985409637104,8.6717783850629,2.8769239232215,1.7931249457037,3.31075121844019,2.75796544589295,9.03678557017357,14.8969135253776,2.63539275359647,3.547779950752,5.16864014223695,1.83650335422542,4.49300637906531,5.75403413219137,1.31940520074686,1.39624560335142,1.70489900213078,2.03146467040009,3.40431134814684,9.9651559839292,4.27122730936464,3.65038042894141,5.64690996233303,9.08099253950053,10.3117738076518,10.7597211729901,4.22510572623884,2.97646019951061,1.88692780957538,1.12328631146495,0.750884464207532,0.803627933485401,2.85012743741249,2.18808344918999,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,7.31420598941885,1.34140171940727,3.70801429346238,2.53007406669196,10.0267582127178,8.83563765661025,1.5905718941022,3.40644409211845,4.53767122387526,3.54767035940102,2.81071314218003,6.22150608614135,102.731271298497,101.965721765718,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,0.775250277507987,1.06729878806013,0.66944122552934,0,0,0.24406205754817,0,0,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0.549605231791222,1.31780417436063,0,119.053676234912,1.98788780678127,6.20489507156441,1.72131935057184,1.43418310374407,3.54668382198357,9.53151920241922,3.20246987189115,2.96001058100592,5.91300967259556,1.21239604862719,0.817309515567294,1.05950199351452,1.15235184896,13.824964478194,0.624320153660641,2.2818872861778,0.448346041655403,3.17073146338165,5.17993421978021,7.72479436862367,2.24569588380383,9.08973948107083,2.06651562351531,0,0,19.1133886006986,3.59309070908119,6.90178067211671,4.00379263590285,3.60183350129438,2.63386572528503,0.919463387397059,0.901428353439581,4.76415169272088,9.14887142013196,6.83383644219416,4.02670612203168,3.60109315301283,1.54578793857658,7.47157566132325,5.58350568994769,3.54430297706659,2.63079913935236,4.03894038790583,4.60249493211497,3.39456719319505,10.6502877754984,6.14587799188606,14.4126503463914,12.9484771619409,10.0916064618609,8.89094245705912,85.5035679968464,115.300898439692,87.3778450378778,44.8852368216554,77.2101803679423,67.1558340699527,6.25798129319264,14.7945415784364,41.4404764057442,2.3218396401599,2.16563844500876,5.67872640191251,6.40621822296786,8.91740810568883,4.74264082749294,5.44698610231015,4.03360052488864,4.44943316928543,4.70931516300831,3.46272441251751,1.4763109092493,4.20725321410337,21.8134226005642,27.931655163253,0,0,0,0,5.411491295897,1.20097467208968,31.4983319122755,89.9214026060956,21.1110842064425,30.0912446765221,19.5484983186195,3.11980435583874,7.21656710126366,3.13012093432707,1.6437217193015,0.577465791044295,0.462985512576611,0.380508304469197,15.8040879591855,12.8772924314231,0,0,0,9.3733833986777,13.6065523841076,8.64828093178557,26.5988812427459,27.3195902203124,42.5554773873384,0,0,2.28060927094849,1.00883967391873,1.2624243342638,0.380987365753014,1.14596527667483,3.51652341630141,3.4214489204541,0.514137463516618,0.600686115687835,0.571652865261156,3.47606361470618,0.87192013766656,2.12681028880755,1.93907573636667,114.450062672602,6.762422020448,1.86156681609409,3.12022310734098,10.80270971901,4.25547396069835,8.52550972851518,12.2961074546007,19.5343777940919,21.4042487563,7.16619605446217,17.0588135396422,8.71147060226772,1.20575750823834,0,0.799783929456456,0,0,0,7.42837052023906,29.8641033168696,0,2.31650090668127,1.43833425785268,3.04403637507822,0,0,0.215627574859517,0.128343036279748,2.03275699377971,2.60279707715243,6.18631050222156,1.50764638800914,4.46557126157214,0.749007023947182,2.99161459204025,0.414415513436035,5.15304265220388,3.50119364741774,4.34024037919577,4.36738809214695,6.60187258549499,9.61984731707001,7.26276772954822,9.63027519128701,9.09630016223939,14.4862299809507,5.31380478828349,11.9839959552107,1.82455590382974,2.74121620447837,1.02943027143257,0,0.647142602455851,0.320182673410333,596.251933034792,429.403433937082,310.554831249582,1.24053903909388,3.6830873589135,1.12264037773229,5.38184426873944,3.58195074346692,7.23842645146234,7.42090332224955,2.92998418225046,0.887808626565635,1.56041596426237,1.55776328755086,1.97557643381931,8.21844257223031,0.802025881213139,12.8913384510255,0.918515585316854,2.1850940160806,0.917870904715969,6.3167945807037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| |||
|short_description=p1@FAM46B | |||
}} |
Revision as of 17:18, 10 January 2014
Short description: | p1@FAM46B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM46B_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 0bp_to_ENST00000289166, NM_052943, uc010ofj.1_5end |
EntrezGene: | FAM46B |
HGNC: | 28273 |
UniProt: | Q96A09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.87e-09 | 19 |
epithelial cell | 1.23e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.09e-09 | 160 |
endoderm | 1.09e-09 | 160 |
presumptive endoderm | 1.09e-09 | 160 |
extraembryonic membrane | 6.73e-08 | 14 |
membranous layer | 6.73e-08 | 14 |
extraembryonic structure | 1.45e-07 | 24 |
respiratory system | 2.27e-07 | 74 |
head | 2.74e-07 | 56 |
digestive system | 4.63e-07 | 145 |
digestive tract | 4.63e-07 | 145 |
primitive gut | 4.63e-07 | 145 |
surface structure | 8.60e-07 | 99 |
subdivision of digestive tract | 9.52e-07 | 118 |