FFCP PHASE1:Hg19::chr1:120255269..120255282,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:120255269..120255282,- | |||
|id=chr1:120255269..120255282,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.20e-11;1!CL:0002625;8.20e-11;1!CL:0002550;8.20e-11;1!CL:0000216;8.20e-11;1!CL:0002591;8.20e-11;1!CL:0000333;1.66e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.58e-11,1;CL:0002625,4.58e-11,1;CL:0000216,4.58e-11,1;CL:0002550,6.14e-11,1;CL:0002591,6.77e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.20e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.38e-09!143;DOID:162!1.24e-07!235;DOID:14566!1.25e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.79e-11;1!DOID:4549;2.79e-11;1!DOID:5861;2.79e-11;1!DOID:6496;2.79e-11;1!DOID:4960;8.20e-11;1!DOID:0070004;8.20e-11;1!DOID:169;3.15e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.79e-11,1;DOID:4549,2.79e-11,1;DOID:5861,2.79e-11,1;DOID:6496,2.79e-11,1;DOID:4960,1.61e-10,1;DOID:0070004,1.61e-10,1;DOID:169,2.78e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;8.20e-11;1!UBERON:0001136;8.20e-11;1!UBERON:0001343;8.20e-11;1!UBERON:0004910;8.20e-11;1!UBERON:0004813;8.20e-11;1!UBERON:0001567;8.20e-11;1!UBERON:0000013;1.66e-08;5!UBERON:0002410;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.58e-11,1;UBERON:0001343,4.58e-11,1;UBERON:0004910,4.58e-11,1;UBERON:0005154,4.58e-11,1;UBERON:0005295,4.58e-11,1;UBERON:0004813,4.58e-11,1;UBERON:0005297,4.58e-11,1;UBERON:0005294,4.58e-11,1;UBERON:0010141,4.58e-11,1;UBERON:0005891,4.58e-11,1;UBERON:0001831,9.97e-11,1;UBERON:0001567,9.97e-11,1;UBERON:0008801,9.97e-11,1;UBERON:0000013,1.43e-08,5;UBERON:0002410,1.43e-08,5 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.639312809217652,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0,0,0,0.151357427644931,0,1.17160715916898,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0,0.500474079487857,0,0.438977620880838,0.612975591598039,0.300476117813194,0.340296549480063,0,0.427114777637135,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0,0,0.487894824518382,0.397589304964456,0.464775771478074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,3.10419213877515,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0.184161977871793,0.459257792658427,0.364182336013434,0.786746489756545,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.206082023295445,0.183138929636687,0.330037999682352,0,0.650060246036521,1.6068392984416,1.06337790121334,0.154048617114644,0,0.137836572484531,0,0,0,0.712256285173899,0,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0.379473173765715,2.0996083214699,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0.28853842595289,0.213425530045242,0.318852545457645,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0.448788222048861,1.84700532267414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.08194319871046,0,0,0.611030144933625,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,0,0,0.364909578431332,0,0.728341138602278,0,0,0,0,1.05226393590145,0,1.99396161812156,0.330991955875499,1.2557316736289,0,0.853828638089378,0.277349346026277,0,0.489961987071888,0.261177619741208,0.17472666824203,0,0.0967563312890851,0.292357268344742,0,0,3.26547668758551,0,0.411125773940253,0,0.0633107959558787,0.782205530939212,0,0.213452994739353,0.599428828746391,0,0.572682980829578,0.343189995723929,0,0.372757606696298,0.471388069233591,0.135904206073614,0.104602846312333,0.713987523454252,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0,0,0.360299883542404,0,0.315132729228895,0.0824158583811665,0.202210631562555,0.196854963029498,0.169346664131569,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.262272940674991,0.316801009558219,0,0.959575986597226,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0.471162288750703,0,0,0,0,0.221858103073705,0.124192805882767,0.276697269872462,0,0,0.285465333544967,0,0.468334905806882,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0,0,0.489473409012935,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.320075189082423,1.03328987796489,0,0,0,0,1.53473245564382,0.107824811396682,0.471797825567689,0.327628914576042,0.169732529954025,0.425149840203366,0.371807292777007,1.11728983594649,0.31800435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| |||
|short_description=p@chr1:120255269..120255282,- | |||
}} |
Revision as of 20:25, 10 January 2014
Short description: | p@chr1:120255269..120255282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:120255269..120255282, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.58e-11 | 1 |
seminiferous tubule epithelial cell | 4.58e-11 | 1 |
Sertoli cell | 4.58e-11 | 1 |
fibroblast of the conjuctiva | 6.14e-11 | 1 |
smooth muscle cell of the pulmonary artery | 6.77e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.58e-11 | 1 |
seminiferous tubule of testis | 4.58e-11 | 1 |
epithelium of male gonad | 4.58e-11 | 1 |
epithelial cord | 4.58e-11 | 1 |
sex cord | 4.58e-11 | 1 |
seminiferous tubule epithelium | 4.58e-11 | 1 |
testis sex cord | 4.58e-11 | 1 |
genital ridge | 4.58e-11 | 1 |
primitive sex cord of indifferent gonad | 4.58e-11 | 1 |
coelomic epithelium | 4.58e-11 | 1 |
parotid gland | 9.97e-11 | 1 |
cheek | 9.97e-11 | 1 |
parotid gland primordium | 9.97e-11 | 1 |
sympathetic nervous system | 1.43e-08 | 5 |
autonomic nervous system | 1.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.79e-11 | 1 |
extraosseous chondrosarcoma | 2.79e-11 | 1 |
myxoid chondrosarcoma | 2.79e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 2.79e-11 | 1 |
bone marrow cancer | 1.61e-10 | 1 |
myeloma | 1.61e-10 | 1 |
neuroendocrine tumor | 2.78e-07 | 6 |