FFCP PHASE1:Hg19::chr1:168195208..168195223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25140 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TIH2 | |||
|association_with_transcript=20bp_to_ENST00000367829_5end | |||
|description=CAGE_peak_2_at_SFT2D2_5end | |||
|id=chr1:168195208..168195223,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.24e-08!173;UBERON:0006601!2.24e-08!173;UBERON:0004121!3.95e-08!169;UBERON:0001017!6.04e-08!82;UBERON:0000073!9.17e-08!94;UBERON:0001016!9.17e-08!94;UBERON:0005743!9.87e-08!86;UBERON:0000033!2.77e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.13e-09,171;UBERON:0000924,6.13e-09,171;UBERON:0006601,6.13e-09,171;UBERON:0001016,1.10e-08,89;UBERON:0001017,1.88e-08,81;UBERON:0010371,6.90e-07,104;UBERON:0000955,9.74e-07,68;UBERON:0006238,9.74e-07,68 | |||
|phase1_expression=1.45342703416445,2.14100523890983,1.83240725324762,0,0.446961094427288,1.74467704820074,0,0.631719873426831,1.04474251279935,1.47440361900905,0,1.74753097704138,1.05506791291381,1.48519623552056,2.98257638155124,0,1.20538905604795,0.730310090387373,0.487932798790507,3.20114750999649,2.44800829493104,2.82109249330279,4.57977579409691,1.09499540058307,3.89182182743889,1.14620108621927,0.985207073399349,1.49550484495991,0.786728553697808,0,1.23852898652861,0,0.6024118375565,0.369754010166788,1.23947520928483,1.13735385989937,1.17440175733939,0,0.601633342410425,0.651032612147555,2.01523926815932,1.29557466407592,0.515151135268373,0.872389432677388,0,0.727752183563449,0.697287110717054,0,0.309706370895104,0.863077176966451,0.256160706529101,1.6553756092201,0.344745680736619,0.645484683583826,0,0.564727018627814,0.818718450173537,0.898893937780338,1.22433556948361,0.641858054152187,0.639337125799041,0.989553900560148,0.199463657621632,1.27867425159808,0.580418477257168,0,0,0.251248665256743,2.60741459210101,1.52032191293582,0,0,1.26584954976354,1.05627643155971,0.425208599930087,0.628975936525128,0.336985893439485,0.600707571366025,0.64290234678832,0.285012743741249,0.59675003159727,1.27864907635244,0,2.18455444504853,0,0.853460445133014,0.400395987036012,1.72425731986345,1.32208974556972,0.954053754535364,0.569212969109448,2.34894875748376,0,1.32171328579026,0,1.31692042387539,0.196709770113833,0.393010762749165,0.822405995998037,0.334372990781356,0.651844533267181,0.473447805734733,1.94826728407911,0.557052284425868,0.589211814949674,0,0.270803863765016,0.512365278902701,1.04047478047903,1.15106533222573,0.829050053357545,0.579606171470105,0.296573126324121,0.267540828089713,1.04535523804977,0.453237370790265,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.602300476311091,0.76791966692651,2.49861453104692,0.236777252044017,0.821127996921047,0.604820229674197,0.802320587350522,0.434473211648397,2.43806866313962,0.670700859703636,1.40648818027883,0.722878304769133,1.00267582127178,1.01392563272577,3.1811437882044,3.40644409211845,2.26883561193763,1.10864698731282,1.75669571386252,1.96468613246569,0.728590576585084,1.11235332835329,1.29818957461873,2.96020553408754,2.92507513141503,3.33886874027479,2.85997455390064,2.60020250930695,0.39752481473341,0.860234595106124,0.347140501607594,0,0.838998872419812,1.6507082516404,1.67195973229448,0.516833518338658,0.71153252537342,1.00416183829401,2.81980521976403,2.28081631715554,1.22031028774085,1.47065232138347,1.62028389576352,1.42879565254528,0.22452937262617,0.675668882899933,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,0.993943903390637,1.2663051166458,0.529636723252875,1.43418310374407,2.12801029319014,1.68203280042692,1.06748995729705,0.74000264525148,2.17847724779836,0.942974704487816,0.817309515567294,1.51357427644931,1.15235184896,1.17160715916898,1.5608003841516,0.570471821544449,0.747243402759005,1.29177948508141,1.78060238804945,1.54495887372473,2.04154171254893,1.10550885580591,1.13658359293342,1.18800285728205,1.48360157567134,2.73048408581408,0.718618141816238,2.02003336744879,1.50142223846357,1.93944880838928,0.877955241761676,1.22595118319608,1.35214253015937,1.70148274740032,1.4351170855109,2.13557388818567,1.69545520927649,2.40072876867522,1.33968288009971,1.03056216018252,1.48893485065272,1.0126579934476,2.14361411354637,1.00973509697646,2.02509777013059,1.13152239773168,1.06502877754984,1.71278566986988,1.69560592310488,1.73934767846967,1.90922284413584,1.72082757233402,0.731842236777572,1.72288698817931,1.62671520017326,0.932949495138334,1.00928340350251,1.45990943630332,0,0,2.76269842704961,0.928735856063958,2.16563844500876,2.36613600079688,2.19160097101532,1.44606617930089,1.21323370005633,3.4860711054785,1.89816495288877,1.61797569792197,1.37355025587742,2.69323009862473,0,0,1.6462960453256,0,2.53510069643662,4.91413608338813,0.590789906681404,1.7658523976586,0.614942192715568,1.20097467208968,2.19500570817251,1.1240175325762,1.50793458617446,1.01847289674383,1.3032332212413,2.07986957055916,0,3.24605133930215,1.40890433082986,1.15493158208859,2.77791307545966,1.52203321787679,0.790204397959275,0,1.72351904261178,1.8720341211139,2.0808362720422,0,1.17587489739202,1.70130116690864,0.716468181622786,0,1.15014803749563,1.47798971368783,0.616339038092582,1.03664057770386,0.144119953416961,0.50496973370552,2.41291998310242,0.763976851116555,0,0,1.13110241973656,1.50171528921959,1.14330573052231,1.56983518083505,1.74384027533312,2.12681028880755,1.42198887333556,0,0,1.86156681609409,0,1.54324424557285,1.41849132023278,1.0656887160644,0.857867961948885,1.08524321078289,1.64648067356154,0.65147236858747,0.710783897485092,0,0.602878754119172,1.74306691720059,1.99945982364114,3.64871341923571,0,4.21667878966063,1.67737398844108,2.29723871668228,4.27910715122155,1.73737568001095,0.61642896765115,1.07436577943937,0.672510863961164,0.197030760201927,0,0.256686072559497,3.81141936333695,6.50699269288109,3.09315525111078,2.68026024534958,1.91381625495949,0,2.99161459204025,0,1.34960640891054,0,0.271265023699736,1.87173775377726,1.07057393278297,1.57702415033935,0.937131319941706,1.20378439891088,2.27407504055985,0,0.664225598535437,1.65932251687533,2.60650843404249,0.587403472388222,2.05886054286514,0.620304078368662,0.215714200818617,0.533637789017222,0,0,0.30239029332968,3.2254015016441,1.2276957863045,1.96462066103151,1.40953064181271,3.07024349440022,1.28683136914886,0,1.23367755042124,0.532685175939381,1.64254312027618,3.11552657510173,1.62694529843943,1.57117284469109,2.20557117333613,1.01289087829486,0.68888668898764,0.728364672026868,0.917870904715969,0.902399225814824,1.07821471946181,0.784349769176855,0,1.16106791782163,1.13733384070897,1.19065593693561,1.0795795805107,0,1.08378575017541,1.00337954770971,2.80363900349542,0,1.79099803777743,1.53481913652154,1.3071772551245,0.769350375349168,1.31205858279882,0.650756789328606,0.515205058238611,1.00726411300178,1.81520899825294,1.72279661398852,1.95018073810956,0,0.870036464629098,0.924291702687866,1.5350367472613,0.689182862422653,1.50388342815583,1.0151168573996,1.27839941124151,2.1367688555217,1.15699440752685,1.15314040419064,1.27612712494584,0.4046311234222,0,2.51849877464512,2.0911118104818,0.616067160352178,1.59691809095107,0,1.11194531462352,2.00374841438788,2.232950216158,0.316379424718726,1.5250415513906,2.303080121802,1.28381696410176,1.27281299170375,0,1.61885211824983,1.92175920815238,0.942499218765491,1.01091240786658,1.58510321173008,1.26377536871694,0.975267478179181,0.487426979262569,0,0.545999645631943,0.707027159768564,2.26016233240486,0.551365343546124,0,0,1.73632660280006,0,1.01455188481352,0.92947049429925,1.12678241012897,1.00387946542836,0.982490410131212,0.7133421029625,0.709522128141196,0.844430541190656,0.329294892959902,1.89736586882858,2.44954304171488,0.48111056362756,0,0,0.659006605437454,0.86101074534246,0,1.33029046061003,0.689170200620878,0.507447609232169,0,0.569647187174163,0.714695326373367,1.23408681925858,0,1.62009431171434,0,2.02965735142199,2.88743956579008,0.980160863924127,0.557409525377156,1.87549976869378,1.13826949357463,1.91311527274587,0.798317485731266,0.191505370132367,0.211673582723883,1.62310970137278,0.280797178113459,0.912938716132769,0.94007937463814,0,0.50787533340481,0.802940375518498,0.403599414382095,0,2.06103206853459,1.22896305723383,0.447352215784832,1.33479313369527,0.781552381608161,0.278406173895242,0,0.811367035427949,0.33307196799782,0,0.18714054040822,1.17206543417515,2.6699314784893,0.557216921387392,1.70481688083848,0.47748896947538,0.593929361665277,0.307160702099232,2.98244294329889,3.09472716103128,0.333926115068718,2.63686198762815,1.47787785689595,1.39473591775749,1.10513566212459,1.25966373927138,1.84083628503879,1.10776324914963,0.622079175323615,0.808815160325942,0.537063524026827,0,0.887790650732402,0,0,0,0.927680981618513,1.99613798001194,0.260427761085233,0.787139999965761,0.724999575434793,1.2517279311405,1.01701460117107,2.36387681767936,2.41320361269025,1.16641845353302,1.38899995946634,0.885741385813839,1.4471572635049,0,0.221158519862449,0,1.09692698576986,1.63407695278485,0.975966209950223,1.30815439456455,1.25336261431701,1.1528195219403,1.6156375993759,0.651884231532048,0.638002319463839,1.09917112082235,2.13213910407454,0,1.41282230755522,0.498635045700469,0.451191321234361,1.76456280885966,2.18168063068596,1.89753732724185,0,3.58696709697646,0.979396848954886,1.27217764290547,1.51472047819464,0.995261931078505,0.707660516026713,0,4.44781693020933,3.58335422944858,3.9680340812073,3.2352543830725,0.802577647298789,1.87411556580271,0.729819156862664,1.76098157038881,0.242780379534093,1.18375320854817,0,2.44858209304392,2.90658266291045,1.05226393590145,1.45163467956146,1.99396161812156,1.65495977937749,0.313932918407225,1.19472429772959,1.70765727617876,3.46686682532847,2.08271686002157,0.391969589657511,1.39294730528644,1.39781334593624,1.89184635718778,1.25783230675811,0.803982487948041,1.47807822695777,1.26085721434945,1.5003541537555,1.35588444468319,0.822251547880505,0,1.13959432720582,1.17330829640882,1.28254112402454,0.213452994739353,0.599428828746391,1.00863292007874,4.58146384663663,0.857974989309823,1.1524383839052,0.745515213392595,0,3.94122197613481,3.451893928307,1.4279750469085,2.88950589901519,1.80126086612937,1.77976992559591,3.83239764200917,0.859530882839914,0.262887354279314,1.11712960508902,0.687481272035051,0.717873024576814,1.39775300349294,0.858452096273142,0.446342914883745,1.07493555978762,0.360299883542404,0,0.472699093843342,0.824158583811665,0.471824806979294,1.18112977817699,0.592713324460491,2.38568906942791,1.22583065500418,0.643012593860077,0.825236619583403,2.9080823662043,3.14963448172101,0.77380195455795,1.57948847310864,0.670869375198532,0.945668487590378,1.62609223218494,0.316801009558219,1.07572403599707,1.15149118391667,2.1440859791201,0.662091970365432,0.25426853765475,1.08599920350743,0.864221491201268,0.979762080328227,0,0.328370082997356,1.5334921960688,1.35974509824151,0.732761168390412,2.65013777824443,0.517131825446202,1.58679122091228,2.56630256826494,0.704815022316672,0.320362237703084,0.78602152549833,1.24271716604159,0.496166021811951,2.76656284657122,1.33971858218986,0,1.63205341010842,0.5013797880454,2.14441903734423,1.31149052283922,2.35581144375351,1.77213635993397,0.610131324509816,1.502291168478,0.573409195690071,1.33114861844223,2.29756690883119,0.968440444553616,1.37478448758317,1.81978941049977,6.56570267153425,0.235265819698172,1.40500471742064,1.30428925749743,1.19403842309499,0.934853239388898,0.554805861502613,1.13641803165053,1.25783950876288,1.77962244319307,0.915360273587694,0.907385542579434,0.932623203496683,1.18284119991707,1.11507737014592,0.449803112163605,1.24210365501008,0.414706207840855,0.53168342911599,0.521745061811734,1.35231848097497,1.14241563650639,2.03435366602331,2.36403256963327,0.859284456339908,1.85613503951397,2.3885753321917,0.800055529326307,1.71697852591396,2.02049693259551,2.52369796457302,1.15571898244382,1.50109113962448,0.260994291965212,1.58694147858591,1.15761237161917,0,1.25362188757041,1.23520578864389,1.09642024789354,1.41351316756705,0.964570191354574,0.337884881306145,4.09986429740715,2.76344273384959,0,0.829550616910385,1.16916185303633,2.39156712564054,1.14495775979091,0.655219697692825,0.245772908753719,0.845248493434508,1.79988656269437,1.70706767510625,0.688859918643263,1.13503190713367,1.47284760201473,0.699397538597222,0,1.02315497042921,8.73380972313123,2.67352101155024,1.85656384926424,1.01839517972415,2.76347396132188,1.36329340684902,0,0.318004350653419,0.94634094001504,4.00285374142735,2.1160556621441,0.3062454773532,1.73418907760441,0,1.59633859057151,0.82046545696302,3.02486035466062,1.1756732918917,1.29180516505481,1.42769420259154,1.17777262201231,2.12345502025933,1.10057159113007,1.27078232765372,0.762764190934334,0.690359926060101,0.198916222116275,1.65462722368366,1.81534561833168,1.56302802246618,1.04762677792569,0.982631505060581,0.887136517302272,1.08060135389431,1.56215619722769,1.65349437200947,1.33173201407204,3.28184885410932,0,2.48105589194647,1.05522746615772,0.638812138197976,0.535701835878287,1.3451348888753,1.21393120847326,4.32558163567465,0.266107110487916,0.806637912890455,1.02892805662451,1.97112225632812,1.31545547125698,3.07303986298317,2.8920164491938,1.25588948560822,1.88538707899202,0.840816489941367,0.913158720509496,2.59113109462346,0.47775168788705,1.85839014859306,2.84424501118908,1.51113852978563,1.04314963381548,1.60342272946051,1.03608082081518,1.19502933965765,0.691259661814092,0.860454717640555,1.18332000730565,1.10777426186905,0.423387050190929,1.60374807980835,1.5510319283216,1.91107787795487,1.4541206133713,0.785201868921944,0.487671699929078,1.29485767437579,0.615976841137482,1.1598144313382,0.971421986118279,1.63757624423474,1.98950775161368,1.78380136166353,1.24240690242856,0.219881033490858,0.754814217833368,0.926089897295336,1.09279780251979,1.41095188908457,0.245148321753905,1.17838273550813,0.981542335574726,1.78227840196252,1.2679671827502,0.849635573439084,1.31577485171795,1.80482086326016,2.39858774219829,0.892769693028288,1.76447435857846,0.641930933513346,0,0.917458566809082,1.14671666521161,3.62874593044325,1.49581278420012,4.36350690340377,0,1.48798007266701,1.84870251452567,1.73050624849516,0.630832124175395,1.20192129160065,1.64708051314868,2.03977659483963,0.534434810531121,0.918948995348449,0.250707539292375,2.57647573942014,1.60778478093707,1.65833887891756,2.1720929130998,0,0.952257725854961,1.0980114672121,1.1794195716213,0.672791175483681,1.40023748211963,1.61693751166575,0.217716747896961,1.02669990325584,1.34704106029175,1.14755528628282,1.66330178273007,2.27929152110729,0.533636729388577,5.7921684686082,1.25755282949222,2.34640942403454,2.68931177202306,2.44137706989443,0,1.20764276154616,0.320568492303233 | |||
|short_description=p2@SFT2D2 | |||
}} |
Revision as of 22:08, 10 January 2014
Short description: | p2@SFT2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFT2D2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000367829_5end |
EntrezGene: | SFT2D2 |
HGNC: | 25140 |
UniProt: | Q5TIH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.13e-09 | 171 |
ectoderm | 6.13e-09 | 171 |
presumptive ectoderm | 6.13e-09 | 171 |
nervous system | 1.10e-08 | 89 |
central nervous system | 1.88e-08 | 81 |
ecto-epithelium | 6.90e-07 | 104 |
brain | 9.74e-07 | 68 |
future brain | 9.74e-07 | 68 |