FFCP PHASE1:Hg19::chr1:172113686..172113715,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406977 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31572 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_NR_029618_5end | |||
|description=CAGE_peak_2_at_MIR199A2_5end | |||
|id=chr1:172113686..172113715,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-32!180;CL:0000057!1.97e-24!75;CL:0000048!1.37e-11!430;CL:0002620!4.61e-11!23;CL:0000680!8.10e-11!57;CL:0000056!8.10e-11!57;CL:0000355!8.10e-11!57;CL:0000723!9.33e-11!436;CL:0000499!1.37e-10!27;CL:0002334!3.92e-10!12;CL:0000034!5.71e-10!444;CL:0000187!1.75e-09!54;CL:0000183!6.60e-09!59;CL:0000327!2.21e-08!14;CL:0000393!2.17e-07!60;CL:0000211!2.17e-07!60;CL:0000153!8.84e-07!9;CL:0000447!8.84e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.97e-15;12!CL:0000723;3.21e-10;61!CL:0000134;3.25e-10;55!CL:0000048;8.70e-10;58!CL:0002320;1.45e-08;188!CL:0000499;1.05e-07;28!CL:0000034;1.61e-07;69!CL:0002620;3.43e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.49e-19,76;CL:0000048,6.29e-16,427;CL:0000723,2.97e-15,433;CL:0002334,4.99e-15,12;CL:0000034,2.18e-14,441;CL:0000134,6.69e-10,354;CL:0000219,2.17e-09,386;CL:0002320,2.98e-09,361;CL:0000499,9.74e-08,28;CL:0000680,1.52e-07,58;CL:0000056,1.52e-07,58;CL:0000355,1.52e-07,58;CL:0002620,2.88e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.67e-12!83;UBERON:0002329!1.67e-12!83;UBERON:0003077!1.67e-12!83;UBERON:0003059!1.67e-12!83;UBERON:0007282!1.67e-12!83;UBERON:0009618!1.67e-12!83;UBERON:0007285!1.67e-12!83;UBERON:0004290!4.35e-11!70;UBERON:0002385!2.29e-10!63;UBERON:0001015!2.29e-10!63;UBERON:0000383!2.29e-10!63;UBERON:0001134!6.30e-10!61;UBERON:0002036!6.30e-10!61;UBERON:0003082!6.30e-10!61;UBERON:0000486!3.29e-09!82;UBERON:0002100!4.72e-08!216;UBERON:0004457!1.85e-07!12;UBERON:0000042!1.85e-07!12;UBERON:0002199!2.08e-07!45;UBERON:0002416!2.08e-07!45;UBERON:0002384!3.46e-07!375;UBERON:0000479!4.76e-07!787;UBERON:0003102!6.66e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.85e-08;6!UBERON:0002358;5.85e-08;6!UBERON:0003684;5.85e-08;6!UBERON:0001178;5.85e-08;6!UBERON:0002385;3.24e-07;31!UBERON:0001015;3.24e-07;31!UBERON:0000383;3.24e-07;31!UBERON:0002384;4.10e-07;198!UBERON:0004457;5.53e-07;9!UBERON:0000042;5.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.48e-10,371;UBERON:0003688,9.29e-08,6;UBERON:0002358,9.29e-08,6;UBERON:0003684,9.29e-08,6;UBERON:0001178,9.29e-08,6 | |||
|phase1_expression=3.45188920614058,5.35251309727458,2.96004248601539,1.0007329835313,2.23480547213644,1.74467704820074,2.53299878168311,0,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0.495065411840187,0.662794751455832,2.6893005858071,0,1.46062018077475,3.41552959153355,0,0,0.313454721478088,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.255725123687061,1.44575660953827,0.50133791063589,2.02785126545153,4.7717156823066,4.37971383272372,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0.735326160691737,0,0.446498641420399,0.44905874525234,0.563057402416611,0,0,0,0,0,0,1.98788780678127,2.27934920996244,1.98613771219828,5.73673241497627,2.12801029319014,0,0,0.74000264525148,1.24484414159907,0.67355336034844,1.30769522490767,0.908144565869588,3.45705554687999,0.70296429550139,0.312160076830321,0,0.298897361103602,0.587172493218824,0.809364721840658,0.140450806702248,0.61246251376468,0.245668634623536,0.309977343527296,1.18800285728205,1.23633464639278,1.82032272387605,0,1.5150250255866,0.750711119231785,0.277064115484183,1.75591048352335,1.83892677479412,0.150238058906597,0.453728732640084,1.97328599257748,2.77624605464138,0.423863802319124,1.20036438433761,2.67936576019941,3.34932702059318,0.744467425326359,14.0084355760251,5.35903528386592,2.01947019395292,2.48534726334208,1.77810662500693,4.61512470271599,2.11579406278045,0.67824236924195,0,0,0,0,0,0,0,0.252320850875628,0,3.12899064659632,1.28648187638577,0,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.66004457238855,1.29271715757778,0,0.845302752556,4.78688609852767,1.04007436911366,0.771622122786426,0,0.799266537048298,1.42977993658148,0,0,1.30294473717494,0.355391948742546,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,1.19812427745791,1.14861935834114,0,1.73737568001095,1.2328579353023,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,1.45579603071565,0.713715955188647,1.89242898040722,0.819989904948992,0,0,1.03473071292505,7.3064815838898,0.921845842708516,1.99832313276591,0,0.686286847621712,0,0,0,0,0,0,3.96972492510043,12.276957863045,6.17452207752762,2.30650468660262,4.09365799253363,3.53878626515936,1.48418066444991,4.1636617326717,3.55123450626254,3.03870477251094,1.03850885836724,2.32420756919918,0,0,0,1.49258782613989,2.73136752010076,1.04899531967539,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.183138929636687,0.907604499126468,0,0,0,0.96670718292122,1.3864375540318,1.99554777143968,1.24052915236078,3.75970857038958,2.32026710262766,1.87498580315422,4.71869788927708,0,0,0,0,0,2.83331112147576,0,0.308033580176089,0,0,0.18532421910392,0.715624433709956,1.48863347743867,1.89827654831236,0.953150969619124,0.255897791311334,0,0.318203247925937,0,2.15846949099978,1.09814811894422,1.53156123049392,0.606547444719948,0,0.421258456238981,0.48763373908959,0.731140468893853,0,2.45699840534374,2.2624869112594,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.563391205064483,2.29458163526482,0.294747123039363,0.7133421029625,1.77380532035299,0.844430541190656,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,38.4566656058903,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,4.03029410968194,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.31593289814244,0,0,0,0,0,0,0,4.43758953642044,0,0,0,0.873633341210151,14.6188127600874,0,0,0,0.0969890164884194,69.9871084663597,0.225980740780532,0,0,0,0,0,0,0,0,0.916292769327325,0,0,0,0,1.22313785466253,0.313808538937,0,3.17845648891671,0,0,0,0,0.262887354279314,0.558564802544508,0.458320848023367,1.43574604915363,0.199679000498991,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.524545881349981,0,0,0,0,0,17.290260560523,1.08599920350743,1.72844298240254,0.326587360109409,0,0,4.43008856642096,0,0,0,0,0,0,0,0.106787412567695,1.25763444079733,0.414239055347196,0.992332043623902,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,14.179206274253,8.17996584465286,3.32883516901568,2.65164207385125,1.0062716070103,2.66943366478961,1.37304041038154,1.51230923763239,4.6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| |||
|short_description=p2@MIR199A2 | |||
}} |
Revision as of 22:17, 10 January 2014
Short description: | p2@MIR199A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR199A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_NR_029618_5end |
EntrezGene: | MIR199A2 |
HGNC: | 31572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.49e-19 | 76 |
multi fate stem cell | 6.29e-16 | 427 |
somatic stem cell | 2.97e-15 | 433 |
preadipocyte | 4.99e-15 | 12 |
stem cell | 2.18e-14 | 441 |
mesenchymal cell | 6.69e-10 | 354 |
motile cell | 2.17e-09 | 386 |
connective tissue cell | 2.98e-09 | 361 |
stromal cell | 9.74e-08 | 28 |
muscle precursor cell | 1.52e-07 | 58 |
myoblast | 1.52e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-07 | 58 |
skin fibroblast | 2.88e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.48e-10 | 371 |
omentum | 9.29e-08 | 6 |
peritoneum | 9.29e-08 | 6 |
abdominal cavity | 9.29e-08 | 6 |
visceral peritoneum | 9.29e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.26e-07 | 14 |