FFCP PHASE1:Hg19::chr10:47058211..47058256,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C980 | |||
|description=CAGE_peak_at_chr10:47058211..47058256,+ | |||
|id=chr10:47058211..47058256,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.49e-14!3;CL:0000861!1.49e-14!3;CL:1000415!1.58e-09!2;CL:0000077!1.43e-07!19;CL:0000066!7.36e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000415;2.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.72e-10,253;CL:1000415,2.15e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.14e-39;29 | |||
|ontology_enrichment_disease=DOID:162!1.68e-14!235;DOID:14566!4.90e-14!239;DOID:305!4.03e-13!106;DOID:0050687!5.85e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:4231;4.55e-07;2!DOID:1907;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.13e-20,106;DOID:0050687,1.40e-16,143;DOID:162,2.26e-12,235;DOID:14566,4.50e-12,239;DOID:4231,5.28e-07,2;DOID:1907,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.30e-39!9;UBERON:0001557!1.42e-17!19;UBERON:0008947!4.94e-12!38;UBERON:0003258!4.94e-12!38;UBERON:0000072!1.53e-09!46;UBERON:0000065!5.50e-08!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.22e-81;9!UBERON:0001557;1.22e-81;9!UBERON:0000072;2.33e-26;37!UBERON:0000065;1.20e-21;44!UBERON:0001004;1.47e-12;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.36e-81,9;UBERON:0001557,2.42e-38,19;UBERON:0008947,2.06e-29,38;UBERON:0003258,2.06e-29,38;UBERON:0000072,1.46e-23,47;UBERON:0000065,2.35e-20,54;UBERON:0001004,1.59e-14,74;UBERON:0001041,3.63e-12,87;UBERON:0004921,1.51e-08,118;UBERON:0001007,2.93e-08,145;UBERON:0001555,2.93e-08,145;UBERON:0007026,2.93e-08,145;UBERON:0001048,2.11e-07,160;UBERON:0004119,2.39e-07,160;UBERON:0000925,2.39e-07,160;UBERON:0006595,2.39e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01121560067735,2.19160097101532,1.68707720918437,1.7647035637183,1.08939722046203,1.89816495288877,2.15730093056263,2.15843611637881,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.261177619741208,0,0,3.28971526382889,2.70430473218887,2.13500188338344,0,0,0,0,0,0,3.32437350649165,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,2.22412889249628,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,1.36023555307363,0.926089897295336,0,0,1.85280868296583,0,0,0,0,0,0.690860683462397,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:47058211..47058256,+ | |||
}} |
Revision as of 02:43, 11 January 2014
Short description: | p@chr10:47058211..47058256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:47058211..47058256, + |
Coexpression cluster: | C980_gall_epitheloid_merkel_Hep2_cervical_bronchogenic_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.72e-10 | 253 |
epithelial cell of gall bladder | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.36e-81 | 9 |
upper respiratory tract | 2.42e-38 | 19 |
respiratory primordium | 2.06e-29 | 38 |
endoderm of foregut | 2.06e-29 | 38 |
segment of respiratory tract | 1.46e-23 | 47 |
respiratory tract | 2.35e-20 | 54 |
respiratory system | 1.59e-14 | 74 |
foregut | 3.63e-12 | 87 |
subdivision of digestive tract | 1.51e-08 | 118 |
digestive system | 2.93e-08 | 145 |
digestive tract | 2.93e-08 | 145 |
primitive gut | 2.93e-08 | 145 |
primordium | 2.11e-07 | 160 |
endoderm-derived structure | 2.39e-07 | 160 |
endoderm | 2.39e-07 | 160 |
presumptive endoderm | 2.39e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.13e-20 | 106 |
cell type cancer | 1.40e-16 | 143 |
cancer | 2.26e-12 | 235 |
disease of cellular proliferation | 4.50e-12 | 239 |
histiocytoma | 5.28e-07 | 2 |
malignant fibroxanthoma | 5.28e-07 | 2 |