FFCP PHASE1:Hg19::chr10:49200001..49200037,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:49200001..49200037,- | |||
|id=chr10:49200001..49200037,- | |||
|ontology_enrichment_celltype=CL:0000066!7.10e-27!254;CL:0000076!3.75e-20!62;CL:0000077!8.32e-20!19;CL:0002251!2.56e-09!21;CL:0002076!3.69e-08!43;CL:0000223!4.24e-07!59;CL:0002097!9.28e-07!2;CL:0000220!9.31e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.83e-14;3!CL:0002188;2.74e-09;5!CL:1000746;5.38e-07;7!CL:1000612;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.60e-14,3;CL:0002188,2.74e-09,5;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.46e-21!106;DOID:0050687!2.73e-15!143;DOID:1749!6.72e-15!14;DOID:162!4.78e-14!235;DOID:14566!1.61e-13!239;DOID:170!1.75e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.67e-20!9;UBERON:0000344!8.61e-18!12;UBERON:0003729!5.88e-14!5;UBERON:0001557!4.41e-13!19;UBERON:0001004!4.01e-12!72;UBERON:0003343!7.43e-12!4;UBERON:0004785!7.43e-12!4;UBERON:0008947!9.28e-12!38;UBERON:0003258!9.28e-12!38;UBERON:0004119!1.80e-11!169;UBERON:0000925!1.80e-11!169;UBERON:0006595!1.80e-11!169;UBERON:0000065!2.18e-11!53;UBERON:0000072!1.67e-10!46;UBERON:0001007!2.71e-10!155;UBERON:0001555!2.71e-10!155;UBERON:0007026!2.71e-10!155;UBERON:0000077!5.47e-09!130;UBERON:0004921!4.25e-08!129;UBERON:0004185!4.25e-08!129;UBERON:0001041!1.80e-07!98;UBERON:0000974!8.93e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0001987;3.42e-11;4!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7!UBERON:0000074;5.38e-07;7!UBERON:0001229;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000058,1.99e-09,19;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7;UBERON:0003124,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.946454400318751,0.337169380156203,0.723033089650446,0.330881918197182,0,0.474541238222193,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,3.95420745048238,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19760786519031,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0,1.62065732026684,0,0.179088841081487,0.617602894321944,0,0,0.771656153083659,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.353909170043221,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590969204419841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:49200001..49200037,- | |||
}} |
Revision as of 02:44, 11 January 2014
Short description: | p@chr10:49200001..49200037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49200001..49200037, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.60e-14 | 3 |
glomerular endothelial cell | 2.74e-09 | 5 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |
duct | 1.99e-09 | 19 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |
chorion | 5.70e-07 | 7 |