FFCP PHASE1:Hg19::chr10:74020629..74020634,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1321 | |||
|description=CAGE_peak_at_chr10:74020629..74020634,- | |||
|id=chr10:74020629..74020634,- | |||
|ontology_enrichment_celltype=CL:0002057!1.87e-07!42;CL:0000860!6.31e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.04e-34;2!CL:1000398;5.04e-34;2!CL:0002363;7.05e-34;2!CL:0000708;2.62e-23;3!CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.04e-34,2;CL:1000398,5.04e-34,2;CL:0002363,7.05e-34,2;CL:0000008,7.05e-34,2;CL:0000708,2.62e-23,3;CL:0000182,7.92e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000008;7.05e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.04e-34;2!UBERON:0003497;5.04e-34;2!UBERON:0003909;5.04e-34;2!UBERON:0003835;5.04e-34;2!UBERON:0003566;7.05e-34;2!UBERON:0001777;7.05e-34;2!UBERON:0003210;2.62e-23;3!UBERON:0001280;3.27e-23;3!UBERON:0004647;3.27e-23;3!UBERON:0003891;1.03e-17;4!UBERON:0000964;1.03e-17;4!UBERON:0010409;1.03e-17;4!UBERON:0003513;8.99e-11;7!UBERON:0010313;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,5.04e-34,2;UBERON:0003497,5.04e-34,2;UBERON:0003909,5.04e-34,2;UBERON:0003835,5.04e-34,2;UBERON:0003566,7.05e-34,2;UBERON:0001777,7.05e-34,2;UBERON:0003210,2.62e-23,3;UBERON:0001280,3.27e-23,3;UBERON:0004647,3.27e-23,3;UBERON:0005171,3.27e-23,3;UBERON:0003891,1.03e-17,4;UBERON:0000964,1.03e-17,4;UBERON:0010409,1.03e-17,4;UBERON:0004348,1.03e-17,4;UBERON:0005427,1.03e-17,4;UBERON:0002394,2.45e-12,6;UBERON:0003928,2.45e-12,6;UBERON:0003513,8.99e-11,7;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,4.79556075716608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:74020629..74020634,- | |||
}} |
Revision as of 03:26, 11 January 2014
Short description: | p@chr10:74020629..74020634, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:74020629..74020634, - |
Coexpression cluster: | C1321_Meningeal_Pericytes_Smooth_Hepatic_spinal_Ciliary_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.04e-34 | 2 |
endothelial cell of hepatic sinusoid | 5.04e-34 | 2 |
keratocyte | 7.05e-34 | 2 |
migratory cranial neural crest cell | 7.05e-34 | 2 |
leptomeningeal cell | 2.62e-23 | 3 |
hepatocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 5.04e-34 | 2 |
abdomen blood vessel | 5.04e-34 | 2 |
sinusoid | 5.04e-34 | 2 |
abdominal segment blood vessel | 5.04e-34 | 2 |
head connective tissue | 7.05e-34 | 2 |
substantia propria of cornea | 7.05e-34 | 2 |
blood-cerebrospinal fluid barrier | 2.62e-23 | 3 |
liver parenchyma | 3.27e-23 | 3 |
liver lobule | 3.27e-23 | 3 |
hepatic duct | 3.27e-23 | 3 |
stroma | 1.03e-17 | 4 |
cornea | 1.03e-17 | 4 |
eye surface | 1.03e-17 | 4 |
optic eminence | 1.03e-17 | 4 |
corneal primordium | 1.03e-17 | 4 |
bile duct | 2.45e-12 | 6 |
digestive system duct | 2.45e-12 | 6 |
trunk blood vessel | 8.99e-11 | 7 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |